Leucoraja erinacea (little skate): 129704647
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Entry
129704647 CDS
T09122
Symbol
lamb2l
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1
KO
K06243
laminin, beta 2
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04510
Focal adhesion
leri04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129704647 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129704647 (lamb2l)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
K-box
Syntaxin-6_N
DUF5798
Motif
Other DBs
NCBI-GeneID:
129704647
NCBI-ProteinID:
XP_055503889
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All DBs
Position
16:complement(24571569..24635675)
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AA seq
1452 aa
AA seq
DB search
MGRVAMRLLAAILLAVGSCAQELPSLPHGCMEGSCYPATGNLLVGRAHNLTTTSTCGLRG
PANYCIVSHLQGLKKCFQCDSRAPYNPDTSSSSHRVENVIYLSDRTGEMTWWQSENGKEK
VSIQLDLEAEFHFTHLIIKFKTFRPAAMYIERSADFGRSWNAYRYFAFNCTLSFPNIPTG
PLRRIDDTICEHRYSDIEPSTLGEVIYKVLDPAVKVDDPYSLQIQDRLRITNLKIHFTKL
HTLGDNLLDGRPVVLKKYYYAIYELVVRGSCFCYGHASECSPVAGDQGNVPGMIQGRCIC
KHNTQGLNCEQCRDFHHELPWRPARADHPHTCKVCDCNKHSTRCHFDMAVYRATGNARGG
VCEDCLHNTMGKNCELCRPYYYRNPAADIRSHNVCIPCDCDPVGSLEGGVCDGDTDLDYG
SIGGQCRCKDNVQGARCDRCKDGYYGLSLGNPLGCQACRCDPRGLSMIGSSCDPVSGDCV
CKRYVTGRYCDTCLPKYWGLGNDLGGCRPCDCDFGGSSSDRCEGVSGQCDCHPYMSGRQC
QQVEPGYYCMPLDLFTYEGEEAKPRSPSDPLPGGKKRLVEEDCMEMDNLQALGIRRRRHR
QGTHRSPKPWVEVVRREWPLNGMVTWTGLGFARVRDGAGLTFLVSNIPRAMDYSLLLRYE
PESAEDWEAIVKIHTVGLPTTYRCGNLLPHGRPYRLTLHHTERHIMASSPFCFEPSIRYE
ISIRFQRLLAPDWNSNTILVDSLVLLPQYTELPGFVGSGPAAQARRQDMERYRCLQSFTA
AGTPDLADACSRLLCSISALLHHSALPCECDPQGSFSSECTRVGGFCRCKPHVMGRRCDH
CSPNTFGFGPVGCLPCECSAEGSVDGMCDADSGACSCRSGVRGRRCDRCFPDHWGFPACR
PCRCNGHALECDAGTGYCRDCMDHTGGRHCERCVAGYYGDPVLGSGQQCRPCPCPDYPES
GHYHGVSCHADLSSSRIVCLCETGYTGSRCDECAAGYYGNPAVVGSQCWPCECNNNIDVT
DRASCDPQSGRCLACLYNTGGAQCSDCRPGYYGNALQQDCRRCICNVQGTLTSLCDADGL
CHCDRAVGQCSCRPHVVGASCDQCAVHYWNFGHPQGCEPCDCHPEHSHALHCNMFTGQCD
CRPRFGGRSCSECKKNYWGNPGLRCQACDCAAEGSDTLQCDRATGRCLCRQGFTGARCDQ
CSRGYLGRFPSCAPCHICFSMWDEEVDCLWERIEELRERLDRALGTEVNGTAHRALQELE
EQLAKLHSLISSLLPNSTLHLYPLRNLSRDLRQELVAVSQRLDDVERAVARTQEANQGAE
GEVEELDEMTRNLTAGLAQKTRELEKYIKMSFKEYLAAVRAAYWESGQAEQRVNETVWGA
MGPLQESVDTRQRAEGLLQQHQDQLPTDITAHSKELRELQLKVHNMSMDNINKVCGGSGS
CAGPLWGGQLSG
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtgtcgcaatgagattactggccgccattctgctggctgtgggcagctgtgcc
caggagctgccctcgctgccgcacggatgcatggagggcagttgttaccctgccacgggc
aacctgttggtgggccgagcccacaacctgaccaccacctccacctgcggcctgcggggc
ccagccaattactgcatcgtcagccacctgcagggactgaagaaatgcttccagtgtgac
tcacgggcaccgtacaacccagacaccagcagttccagtcaccgggtggagaatgtcatc
tacctcagcgaccggaccggggagatgacctggtggcagtccgagaatggtaaggagaag
gtgagcattcagctcgacctggaggccgagttccacttcactcacctcatcataaagttc
aagacgttccggccggcagccatgtacatcgagaggtccgcggactttggccgctcttgg
aatgcgtatcgctactttgccttcaactgcaccctctccttccccaacatccccactggg
ccactgaggagaatcgacgacaccatctgtgagcaccgctactcagacatcgagccgtcc
acactgggagaggttatttataaagtgctggacccggcggtgaaagtggacgatccctac
agcctgcagattcaagaccggctgaggatcaccaatttgaagatccacttcaccaagctg
cacactctgggggacaatctgttggacgggcggccggtggtcctaaagaagtattactac
gccatctacgagctggtggtgcgcgggagctgcttctgttacggccacgcctcggagtgt
tcccccgtggcgggcgaccaaggcaacgtgccgggaatgatccagggccggtgcatctgc
aaacacaacacacaggggttaaactgtgaacagtgccgggactttcatcatgagttgccc
tggagaccagccagggctgatcacccacacacctgcaaagtgtgtgactgtaacaagcac
tctacgcgctgccacttcgacatggcggtgtacagggcgacggggaatgccagaggcggc
gtgtgcgaggactgtctccacaacaccatgggcaagaactgcgagctgtgccgcccgtac
tactaccgaaacccagcggcagacatccgctcccacaacgtctgcatcccctgtgactgt
gaccctgtgggctcgctggagggaggggtgtgtgatggtgatactgacctggactacggc
agcattggcggtcagtgccgctgcaaggacaatgtgcagggagcgcgctgtgaccgctgc
aaggatggctactatggtctgagcctgggcaacccgctgggctgccaagcctgtcgctgt
gacccccgggggctgtcgatgatcggttcctcctgtgaccccgtcagtggcgactgcgtc
tgcaagagatacgtgactggtcgttactgtgacacctgcctgcctaagtattggggcctg
ggcaacgacctgggaggctgtcgtccctgcgactgtgacttcgggggctcgtccagtgac
aggtgtgagggggtgagtgggcagtgtgactgccacccctacatgtccggccggcagtgc
cagcaggtggagcctggctactactgcatgccccttgacctgttcacctacgagggcgag
gaagccaagcctcgctcaccctccgacccactgcccggaggaaagaagcgtctggtggag
gaagactgcatggagatggacaacctacaggctctgggcatccggcgtcggagacatagg
caggggacccaccgctccccaaagccatgggtggaggtggtgaggagagagtggccgctg
aacggtatggtcacgtggacggggctgggctttgcccgggtacgggacggagccggcctc
accttcctggtcagcaacatcccccgtgccatggactacagcctgctgctgcgctacgag
cccgagtcagctgaagactgggaggccatcgtcaagatccacacggtggggttacccacc
acgtaccgctgcgggaacctgctgccacacggccgaccctacagactcaccctgcaccac
acggagagacacatcatggcgtccagcccattctgctttgagcccagcatccgttacgag
atcagcatccggttccagcggctcctggccccagactggaactccaacaccatcctggtc
gattccctggtgctgctaccccagtacacggagctgccggggttcgtggggtcggggccg
gcggcacaggcccgtcgccaggacatggagcgttaccggtgcctgcagtcgttcaccgca
gccggcacgcccgacctcgccgacgcctgtagccgtctcctgtgcagcatctccgccctc
ctgcaccacagcgcactgccctgtgagtgtgaccctcagggttccttcagctcggagtgc
accagggtcgggggtttctgccgctgcaagccgcacgtgatggggcggcgctgtgaccac
tgctctcccaacaccttcggcttcgggccggtcggctgcctcccctgtgagtgcagcgcc
gagggctcggtggacggcatgtgtgatgcggacagcggggcttgcagctgccgctcaggt
gtgcggggccggcgctgtgaccgctgcttcccggatcactggggcttccccgcctgccgg
ccttgccgctgcaacggacatgccttggagtgcgacgccggcactggatactgccgggac
tgcatggatcacacgggcggccggcactgcgaacggtgtgttgccggttactatggagac
ccggtgctggggtcaggtcaacagtgccggccctgtccgtgtccggactaccccgagagc
gggcactaccatggagtgtcctgccacgccgacctctcctccagccgcattgtctgtctc
tgtgagaccggttacactgggtctcggtgcgatgagtgtgcggcaggttactatggcaac
ccggcggttgttgggagtcagtgctggccgtgtgagtgcaacaacaacattgacgtgacg
gaccgagcatcatgtgacccccagtccggacgttgcctggcctgtctctacaacactggc
ggggcccagtgcagcgactgcaggcccggttactatggcaacgcactccagcaggactgc
aggcgctgcatctgtaacgtccaggggaccctgacctcactgtgtgatgctgacggcttg
tgccactgtgaccgggcagtggggcaatgctcctgccgcccccatgttgttggtgccagc
tgtgaccagtgcgctgtccactactggaatttcggccaccctcagggatgtgaaccctgc
gactgccatccggaacattcccacgccctgcactgcaacatgttcactggccagtgtgat
tgccggccaagatttgggggtcggagctgctcggagtgcaagaagaactattggggcaac
ccagggctccggtgccaggcctgtgactgtgccgctgaggggtcggacactctccagtgc
gatcgagccactggccgctgcctctgccgacaggggtttaccggggccagatgtgaccag
tgcagccgaggctaccttggccgcttccccagctgtgcgccctgccacatctgcttctcc
atgtgggacgaggaggttgactgtctatgggagaggatagaggaactgcgggagaggctg
gatcgggcactgggcacggaggtcaacggcactgcccaccgcgccctgcaagagctggag
gaacagctggcaaagctgcactctctcatctcctcactgctccccaacagcaccctgcac
ctgtaccccctgcgaaacctgtcccgggacctcaggcaggagctggtggccgtgtcgcag
agactggatgatgtggagagagccgttgccaggactcaggaagccaaccagggcgcggag
ggagaggtggaagagctggacgagatgacccgcaatctgaccgcaggcctcgcccagaaa
accagggagctggagaaatatataaagatgagcttcaaagagtacttggcagcagtgagg
gcagcgtactgggagtctgggcaggcggagcagcgggtgaacgagacggtgtggggagca
atgggaccgctgcaggagtcggtcgacacacggcagcgggcagaggggctgctccagcaa
caccaggaccaactccccacggacatcaccgctcacagcaaggagctgagggagctgcag
ctcaaggtgcacaacatgagcatggacaacatcaacaaggtgtgcgggggctcgggcagc
tgtgcgggacccctgtggggggggcaattgtcgggatga
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