Leucoraja erinaceus (little skate): 129704670
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Entry
129704670 CDS
T09122
Symbol
rpn1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri00510
N-Glycan biosynthesis
leri00513
Various types of N-glycan biosynthesis
leri01100
Metabolic pathways
leri04141
Protein processing in endoplasmic reticulum
Module
leri_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
129704670 (rpn1)
00513 Various types of N-glycan biosynthesis
129704670 (rpn1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129704670 (rpn1)
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Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
GTP-bdg_M
APG6_N
Motif
Other DBs
NCBI-GeneID:
129704670
NCBI-ProteinID:
XP_055503930
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Position
16:complement(25412592..25445109)
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AA seq
629 aa
AA seq
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MGAEIALHSGGLLRPFRKHPSPSAPLHAMRASLSISVLLCGLLASLRPVHGGESALVNED
VRRSIDLGTHLAKITAELTLANGGPSATSSFLLALEPALENHLAYIGVTLKNNDEEESSL
NLEETVVRGQSGRFFNVRLASSLAAGAKVKLAIETTFTHVLRPFPTHIAQAEKQYVVFEG
SHYFYSPYPTKSQTTRVKLASKNIESYTKLGNPSKSEDSIDYGPFKDVAAYSQDTLRLHY
ENNSPFLAIVSMTRLIEVSHWGNIAVEETIDLKHCGAVLKGPFSRYDYQRQPDSGISSVK
SFKTILPAAAQDVYYRDDIGNISTSHLVVLDDSVEMEVRPRFPLFGGWKTHYVIGYNLPS
YEYLYNFGDQYALKMRFMDHVFDDQVIDDLTVKLILPEGARNIHLDTPYRIDRQADELHY
TYLDTFGRPVITAHKSNLVEQHIQDIVIHYTFNKVLMLQEPLLVVGAFYILFFTVIIYVR
LDFSITKDPAAEARMKVASITEQVLTLVNKRLGLYRHFEDAVNKYKQSRDIGTLNSGRKT
LETEHRGLSSEIASLQSKLKAEGSDLAEKVAEIQKLDGQVKDLALKASQEAERLVAGKVK
KDAYIESDKHLSSKRQDLVSRIDTILDTL
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggagattgcgctgcacagcggcggcctgttgcgaccctttcggaagcatccg
tctccatccgcccctctccacgccatgagggcttctctctccatctccgtcttgctgtgc
ggcctcttggcgtcgctgcggccggtccatggtggcgagtcggcgctggtgaacgaggat
gtgcggcgctccatcgacttgggcacccacttggccaagatcacggccgagttgacgctg
gccaacggcgggccctcggcgacctcctccttccttctggccctggagcccgccctggag
aaccacctggcctatataggagtcaccttaaaaaataacgatgaagaagaatcctcattg
aatctggaagagactgtggtcagagggcagagtggcaggttcttcaacgtgaggttggca
tcgagcctcgcagctggtgccaaggtgaagctggccatcgaaaccaccttcactcacgtg
ctgcggcccttcccaacacacatcgcccaggccgagaagcagtatgtggtgtttgagggc
agccactacttctactcgccttaccccaccaagagccagaccacccgggtcaagcttgcc
tccaagaacattgaaagctacaccaagcttggcaaccccagcaaatccgaggactccatc
gattacgggccattcaaggacgttgctgcctacagccaggacacactgagactgcactac
gagaacaacagccctttcttggccatcgtcagcatgacacgcctgattgaggtatctcac
tggggaaacatcgccgtggaggagaccattgacctgaagcattgcggcgccgtcctgaag
gggccgttctcccgctacgactaccagaggcagcctgacagtggaatatcctccgtcaaa
tctttcaagaccatcctgcctgctgcggcccaagatgtatactatcgggacgacattggg
aacatctccaccagccacttggttgtcctggatgattccgtggagatggaagtccgccct
cgcttcccgctctttggtgggtggaagactcactacgtcattggatacaacctgcccagt
tacgaatacctgtacaacttcggtgaccagtacgcgttgaagatgcggtttatggaccac
gtatttgacgatcaggtgatcgacgatctcaccgtgaagcttattctgccggagggagcc
cggaatattcacttggacactccgtaccggatcgaccggcaagcagatgagctccactac
acctacctggacacatttggccgcccagtcatcactgctcacaagtcgaacctggtggag
cagcacatccaggatattgtgatccactacaccttcaacaaggtcctgatgctacaggag
ccactgctggtggtgggggcgttctacatcctcttcttcaccgtcatcatttacgtccgc
ctggatttttccatcactaaggacccggcggccgaggcccggatgaaggtggcctccatc
acggagcaggtactgacactggtcaacaagcgtctggggctgtaccgccactttgaggat
gcggtcaataagtacaagcagtcccgcgacatcggcacgctcaatagcggccgcaagacg
ctggagacggagcaccgcggcctctccagcgagatcgcctctttgcagtccaagctcaaa
gccgagggctccgaccttgctgagaaggtggctgagatccagaagctggacggccaggtg
aaggacttggccctgaaggccagtcaggaggctgagcgcctagtggccggcaaggtgaag
aaggacgcctacatcgagagcgacaagcacctgagctcgaagcggcaggaccttgtgtcc
aggatcgacaccatcctggacaccttgtag
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