KEGG   Leucoraja erinaceus (little skate): 129704731
Entry
129704731         CDS       T09122                                 
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:leri00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    129704731 (wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:leri03019]
    129704731 (wdr82)
   03036 Chromosome and associated proteins [BR:leri03036]
    129704731 (wdr82)
Messenger RNA biogenesis [BR:leri03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     129704731 (wdr82)
Chromosome and associated proteins [BR:leri03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     129704731 (wdr82)
    COMPASS/SET1 complex (yeast)
     129704731 (wdr82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WDR55 Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_WDR75_1st WD_LRWD1 WDR90_beta-prop_4th Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_SPT8 Beta-prop_IFT140_1st MinC_C
Other DBs
NCBI-GeneID: 129704731
NCBI-ProteinID: XP_055504017
LinkDB
Position
16:29741012..29759454
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENNDKINCFDFSPNGETLISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFHGHSKRVVALCMSPVDD
TFMSSSLDKTIRLWDLRSPNCQGLMHLQGRPTCSFDPEGLIFAAGVNSEIIKLYDLRSFD
KGPFATFKMQHERTCEWTGLKFSNDGKLMLVSTNGGMVRLIDAFKGAVLQTFGGFNNSKG
ISLEASFTPDSQFVMIGSEDGKVHVWNAESGLKVAVLDGKHTGPVSCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctgacggacaacgtgctgcgcagcttccgagtggccaaggtgttccgggagaac
aacgacaagatcaactgcttcgacttctcccccaacggcgagaccctcatctccagcagc
gacgacgactctatcgtcctctacgactgccaggagggcaagccaaagaggacattgtac
agtaagaagtatggagttgatctgattaggtacacacatgcagcaaacactgtggtttac
agctcaaacaaaattgatgataccattcgttacttgtcacttcatgacaacaagtacatt
agatacttccatggtcacagtaagagggttgtggcgctatgtatgtctcctgtggatgac
acctttatgtctagttctttggataaaactatcagattatgggacctcagatcacccaat
tgccagggcttaatgcatcttcaagggcggccaacgtgttcttttgatcctgagggactt
atttttgcagctggcgtgaattctgagataattaaactttatgatttgcggtcatttgac
aagggtccttttgccacatttaagatgcagcatgaacgaacttgcgagtggacaggattg
aaattcagcaatgatggaaagctgatgctggtctctaccaatggtggcatggttcgactc
attgatgctttcaaaggagcagtactgcaaacgtttgggggattcaacaacagcaagggt
attagtttggaggcatcgttcactccagattctcagtttgtgatgataggatcagaggat
ggtaaagttcatgtgtggaatgctgaaagtggcttaaaggtggctgtcttagatggaaaa
catacaggtccagtttcttgccttcagtttaatcccaaatttatgacatttgccagtgca
tgttctaacatggcattttggctacccacgattgacgactga

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