Leucoraja erinaceus (little skate): 129704782
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Entry
129704782 CDS
T09122
Name
(RefSeq) N-glycosylase/DNA lyase-like
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129704782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leri03400
]
129704782
Enzymes [BR:
leri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
129704782
DNA repair and recombination proteins [BR:
leri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
129704782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
NDT80_PhoG
Motif
Other DBs
NCBI-GeneID:
129704782
NCBI-ProteinID:
XP_055504104
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All DBs
Position
16:34196634..34220912
Genome browser
AA seq
404 aa
AA seq
DB search
MQIHSILSECPTLWRSIPCIQPELRLDIVLSCGQSFRWQEKSPGHWTGVLAGRVWTLTQT
QDHIWYRTYCKDADNVPQVPMGHRKRKGPSARPVGVKMKKKNIAKSRLKSDEGDVHETEK
VFPEEKKELMQCARQINGTTLELLKGESGTADQEESMILSDYFQLHVRLSDLYPHWMHVD
KHFERVVKDFPGIRILRQDPTECLFSFICSSNNHISRIAGMVERLCQTYGERLCQLDSCT
YYSFPTLQALAGNDVEKRLRELGFGYRAKFISQTAKMILEKHGPTWLDSLRETPYEEAKR
ALCTLSGVGAKVADCVCLMSLDKTGVIPVDTHVWQITKRDYLSHLGAGQKSLTDKVYREI
GDFYRRLWGPFAGWAHSVLFSADLKKFQAYKSKQEQQQGNKPKR
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcagatacacagtatattatccgaatgccctacactctggcgatcgatcccctgtatt
cagcctgagctgaggctggatatcgtgctttcttgtggtcagtccttccgatggcaggag
aagagtcccggacactggacgggagtcttggcaggccgtgtgtggactttgacccagacc
caggatcacatctggtaccggacgtattgcaaagacgcagataatgtcccccaagtgcca
atgggccacagaaagaggaaaggcccgtctgcaaggccggtcggtgttaaaatgaaaaag
aagaatattgcaaaaagtagacttaaaagtgacgagggggatgtccacgaaactgagaag
gtgtttcctgaagagaagaaagagctaatgcagtgtgcgcggcagataaacggtaccaca
cttgaactattgaaaggggagtcaggaacggcagaccaagaggagtccatgatcttgagc
gactattttcagttgcatgtgcggctgtccgacctataccctcactggatgcacgttgac
aaacactttgagcgagtggtgaaggatttccctggtatccgcatcctacgtcaagatccc
actgagtgcctcttctctttcatctgtagctccaacaaccacatctcacgcatcgctgga
atggtggagcgtctgtgccagacatacggcgagaggctatgccagctggattcctgcacc
tactactccttccccacactgcaggcactggcaggaaatgatgtggaaaagcggttgcga
gaactgggatttggatacagagcaaagttcatcagccagaccgccaagatgatactggag
aagcatggtcctacttggctggattcccttcgggagacaccatatgaggaagcaaagcgt
gccctgtgcacgctatctggcgtgggggcaaaggtggctgactgcgtttgtttgatgtct
ctggataagacaggtgtgatcccagtggacacacacgtctggcagatcacaaagcgagat
tacctctcccacctgggggcaggtcagaagagtctcactgacaaagtgtatcgagaaatc
ggtgatttttatcgcagactctggggtccttttgctggttgggcacactctgttctgttt
tcagcagacttgaagaagttccaagcgtacaagtccaagcaagagcagcagcagggcaat
aaacccaagagatga
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