KEGG   Leucoraja erinaceus (little skate): 129705011
Entry
129705011         CDS       T09122                                 
Symbol
abcc12
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family C member 12
  KO
K05672  ATP-binding cassette, subfamily C (CFTR/MRP), member 12
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:leri00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    129705011 (abcc12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:leri02000]
    129705011 (abcc12)
Transporters [BR:leri02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    129705011 (abcc12)
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_29 Dynamin_N AAA_22 MMR_HSR1 AAA_21 KAP_NTPase RsgA_GTPase AAA_23 DUF87 cobW nSTAND1 DUF4956 FtsK_SpoIIIE DO-GTPase2 FKBP_N_2
Other DBs
NCBI-GeneID: 129705011
NCBI-ProteinID: XP_055504361
LinkDB
Position
17:complement(3052717..3137683)
AA seq 1379 aa
MASPDASDHVPGKLHKYSQSLKTMIPFRSKSKNPSPAPVDNAGLFSFITFQWLAPVMIKA
SGGKLNQDTLPPLSELSCSDANAKRFMRLWEKEVERVGYKKASLERVTVQFQRTRLIATL
LCTIVSMTCAFLGPGILINAILRHVEEKSENLVYGIGLCFGLFTTELLKIVFFAAVWSIN
YQTGIRLKGAVTXTAFIKLLHLKHLNNTSIGEVLNLLSNDGQRLFEAALFCPLLFGIPVL
LFSCTVYSYFLLGPTSLFGIVIYALFLPIQMLLAQLVMRFRSKAITQTDTRVRLMNEVLT
HIKLIKMYAWEKSFGRSVKDVRKKETNIFRKAGYVQSVNNSLAPTVPAFATVVTFVVHTL
LGQELTASTAFTVIAVFTVMRFTLGTAPYSVKGFAEARVSLRRLKKILIMENPEVYVKSL
QDSPYAVVLDNASLSWSSANGDEGAPNPGDGVSNRKDAFDTDKTRQTNINGQVGQSAPET
ASEEGGVASTTLCNLTLNLEKGMLLGVCGNVGSGKSSLLSALLGQMNLHSGTVAVNESLA
FVSQQAWIFHGTIRENILFGRTLDNERYKKVIEICCLGQDFAALPFGDTTEVGEMGINLS
GGQKQRISLARAVYSDQDIYLLDDSLSAVDAHVGKHVFEQCIKTALVEKTVILVTHQLQY
LEHCDEILLLENGKIKEKGKHEALMSRNGHYANLISNYQMNQPNESEHDGMLPLSSGKGN
VHGRTPSITRHQGLDNAAFDMTDEKNVATGESVENATRARPNGHTERAPKGRLVQAERAA
TGSVPAKIYHRYIKAGGGYVFFLFVLILFGLMIACTTFNGWWLSYWISEGAGADCAASGN
NTTAWDCSSITENPQLQFYQLVYGMSIVAIIVLSAIKGFFFTNFTVKASCSLHDKVFYKI
LHCPMAFFDTTPSGRIINRFSKDTDEMDVRLPFNAENFLQQILVFTFIVVTIAAVFPYLL
IAVAILGGIFALFIRRFQGSIRELKRIENVSKSPWFSHITSSIHGLSTIQAYNKTNDFIK
RFNELGDRNSGHLYLFHCSMRWLGLRIDSLTILMTLTVALFVVLSKDSVSASNKGLALSY
TVQLTGLFQMCIRMAIETESRFLSVERIVEYIQTTASETPCHTVKSDVPKNWPNCGAIKF
ENYRMKYRPDTPIILKGLNLSINPQEHIGIVGRTGSGKSSLIVALFRLADSVTGTILIDN
VDIGTVALEDLRSKLSVIPQDPVLFVGTVRYNLDPFGKYKEDAIWDVLERTYMKEMVTKL
PKKLEAVVVENGENFSVGERQLLCMARALLRNSKIIVLDEATSSIDSETDSLVQDTIKEA
FKDCTILTIAHRINTVLECDRILVMDDGKVVEFDTPAALSQDQNSVFTSMLAASNNMSS
NT seq 4140 nt   +upstreamnt  +downstreamnt
atggcatcaccagacgcaagtgatcatgtcccaggaaaacttcacaaatactcacaaagt
ttaaaaacaatgatcccttttcgctcaaagtcaaagaatccatctcccgctcctgtggat
aatgccggactgttttcattcatcactttccagtggttggcacctgtgatgatcaaagcc
tcgggagggaaactgaaccaagatacacttccccccctctccgagctcagctgctcagat
gccaacgctaaaaggtttatgcgtctttgggagaaagaagtggaaagggttggctataag
aaagcttccttggaaagagtcactgtccagtttcagcgaacacggcttattgcaacccta
ctgtgtacaattgtctccatgacctgtgcctttttgggaccgggaatcttgatcaatgcc
atacttcgacacgttgaagagaagtcagaaaaccttgtttatgggatcggcctttgcttt
ggactattcacgacggagttactgaaaatcgtgttcttcgcagcagtctggtctatcaac
taccagactggtatccgattaaaaggagcggtcaccnacacagcatttataaagctgctg
catcttaaacatttgaacaacacgtccattggtgaggtgctgaacttgttatcaaacgat
ggccaacgattatttgaagcagccttgttttgtcccctcttgtttggcattccagtgttg
ctcttcagctgtacagtatatagttattttttacttggaccgacatcattatttggaatt
gttatttatgctttgtttttacccattcagatgttactggcacaattagtgatgagattt
cggagtaaagccatcacacagacagatactcgcgttcgactgatgaacgaagtgctgacg
catattaaacttattaaaatgtatgcatgggaaaaatcatttggtcgttctgttaaagat
gtgaggaaaaaggaaacaaatatatttcgaaaagccggatatgtacagagtgtaaataat
tccctggcaccgacggtcccagcgtttgccacagtcgtcacctttgttgtacacacactg
ttgggtcaagagctgactgcatccacggcattcactgtgatcgcagtcttcacggtcatg
agattcacattgggtactgcgccctattccgttaaagggtttgcagaggccagagtttct
ttgagaaggttaaagaaaattttgataatggagaaccctgaagtctatgtgaaatctctg
caagattcgccttatgcagtggtgttggacaatgcatcgctctcgtggagcagtgcaaat
ggggatgaaggggcaccaaatcctggcgacggggtctcaaatagaaaagatgcctttgac
accgacaaaacacggcagaccaatattaatgggcaggtgggtcagtcggcccctgaaact
gcatcagaggaaggtggtgttgcctcaacgactctttgcaacctcaccctcaacttggaa
aagggaatgcttttgggagtttgtggaaatgtaggaagcgggaagagttctttactatct
gctctgcttggacagatgaatctgcatagtgggacggtcgctgtcaatgaatcactggcc
tttgtatcccagcaagcttggatatttcatgggacaatcagggaaaacatattatttgga
aggacgttagataatgaaaggtacaagaaggtgattgaaatctgctgtctgggacaagac
tttgccgcgctgccctttggagacacaactgaagtgggtgaaatgggtatcaacctgtcg
gggggtcagaagcagcggatcagcctcgctcgagcggtgtactcagaccaggacatatat
ttactggacgattccctgtcggctgtggatgctcacgtcgggaagcacgtctttgaacaa
tgcatcaaaacagcactcgtagagaaaactgtgattctcgtcactcatcagctgcagtat
ttggagcactgtgacgagatccttttgttggaaaacggaaaaatcaaggaaaagggaaag
catgaggcactgatgagcaggaacggacactacgccaatctcatcagtaattaccaaatg
aaccaacctaatgaatcagaacatgatgggatgttgccactgagttcaggaaaaggaaac
gtacatggacgtactccctccatcacacgacaccaaggcttggacaatgctgccttcgat
atgactgatgagaaaaatgtcgcaacaggcgagagtgttgagaatgcaacgagagcgcgg
ccgaatggacacactgagagagcccctaaaggacggcttgtacaggcggaaagagcagcg
acgggctctgtcccagcaaaaatctaccaccgttacatcaaggcagggggaggatatgtt
ttctttctgtttgttctcatcttgttcggcctcatgatagcctgcacaacctttaacgga
tggtggttgagttattggatatcagagggagctggggctgactgtgctgcatcgggcaac
aataccacagcatgggactgcagcagcatcaccgaaaacccccagctccagttctaccag
cttgtgtacggaatgtccattgtcgccatcattgttctgagcgccattaaaggatttttc
ttcaccaattttaccgtgaaggcgtcctgttcgctgcacgacaaagtgttttataagatc
ttacattgtccgatggcattctttgacacgactccatccgggaggattatcaaccgcttc
tccaaggatacggatgagatggatgtgaggctgccttttaacgctgagaatttcctgcaa
caaatcctggtgtttaccttcatagtcgttactatagcagcggtgttcccctacttgctc
atcgcggtggctatactgggtggcatttttgcgctttttatcagaaggtttcaaggcagc
atcagagagctgaagagaatagagaatgtcagcaaatcgccctggttctcacacatcaca
tcaagtattcatggcctgagcacgatacaagcctacaataaaaccaatgatttcattaaa
cgatttaatgagttaggtgacaggaattccggccacctctacctgttccattgttccatg
cgttggctcggtctgagaatcgactccctcacgatccttatgactctcactgtggcactc
tttgtcgtcttgagtaaagactcagtctctgcatcaaacaagggacttgctttatcatac
accgttcagctgacagggttgttccaaatgtgcatccgaatggcaattgaaacagagtcc
aggttcttatctgtggaacgaatcgtggaatatatacagactactgcatcagaaactcca
tgccacaccgtaaagtcggacgtacccaagaactggccaaactgtggtgcaattaagttt
gagaattatcggatgaaatacagaccagatactccgataatcctgaagggactgaattta
agtataaatccccaggaacatattggaattgttggaagaacaggatctggaaagtcgtct
ttgattgttgctttgttcagactggcggattccgtgacggggacaatcctgatcgacaac
gttgacattggcaccgtagctctggaagatttgcgaagtaaactctccgtcattccgcaa
gaccccgtcctgtttgtgggcacagtgaggtacaatctcgacccctttgggaaatataaa
gaagatgcaatttgggatgtccttgaaaggacatacatgaaggaaatggtgactaagctc
cctaagaaactggaagcggtggtggtggaaaacggggaaaacttctcggtgggagaacgt
cagttgctgtgcatggccagggcgctcctgaggaactcgaagataatagtgttggatgaa
gctacatcctccatcgattcggagactgattccttggttcaggacaccatcaaagaagct
ttcaaagactgcaccatactaacaatcgcacatcggatcaacaccgttctggaatgtgac
aggatactagttatggatgatggaaaggttgtggaatttgacactccagcggcattgtca
caggatcagaattccgtttttacatccatgctggcagcatcaaacaacatgagttcataa

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