Leucoraja erinaceus (little skate): 129705046
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Entry
129705046 CDS
T09122
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129705046 (irx3a)
Transcription factors [BR:
leri03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
129705046 (irx3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
129705046
NCBI-ProteinID:
XP_055504416
LinkDB
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Position
17:complement(7274529..7278071)
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AA seq
445 aa
AA seq
DB search
MSFPQLGYQYIAAARPLYPDRQSLSSSRTAGELTASGAASTVLTMYGSPYAAQGYGAFLP
YAADLPMFPQLGAQYELKESPNVQHPGFPHHHAAYYPYGQYQFGDPSRPKNATRESTSTL
KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNRTDEE
GNSYGSEPDMEGEKKEDDEEIDLENIDTENIESKDDEDEQDPDLNLDCKLDGRSDSEISD
AFDDLNGSEDGFLKSVVKGSRVAEEKRDDLSPEASGQPSGDQTKNNGERKSPASPAPESG
LSMNQKPKIWSLAETATTPDNPRKSPQIGGSPVGSAATSLLGQHRLFACPMGKFQNWTNR
TFSHHPLALINSNHFLGLGAAQAAGVPAFCTVREGRSQSAESTVTDRSSALEIEKKLVKT
AFQPVQRRPQNQLDAAMVLSALSSA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcccacaactgggatatcagtacatagccgccgctaggccactctaccccgac
cgccagagtctatcgtcgtctcggactgcgggcgaactgactgcgtccggcgctgcctcc
accgtgttgaccatgtatggttccccatatgcggcacaaggatacggcgccttcttgcct
tatgcagccgacctccccatgttccctcaactgggcgcccaatacgaactgaaggaaagc
ccgaacgtgcaacaccccggtttcccacaccaccacgccgcttactatccttacgggcag
taccagttcggggatccgtccaggccaaagaatgccaccagggaaagtacaagcactttg
aaagcctggctgaacgagcacaggaagaacccgtacccaaccaaaggggaaaagatcatg
ctggctattatcaccaaaatgaccctgacccaagtgtctacctggtttgccaacgcccgg
aggaggcttaaaaaggagaacaagatgacttggactccgaggaatcggacggacgaagag
ggcaattcgtatgggagcgagccggacatggaaggggagaaaaaggaggacgatgaggaa
atcgatttggagaatatcgacacggagaatatcgaaagcaaagatgacgaggacgaacag
gacccggacttaaacctggactgcaaactggacggcagaagcgactcggagatctctgac
gcctttgacgacttgaacggttcagaggacggttttctaaaatcggtggtaaaagggagc
agggtggccgaggagaagcgagacgacctctcgccagaggcttcgggacagcccagtgga
gaccagactaaaaacaacggcgagaggaaaagccccgcgtcccccgcgcccgaaagcggg
ttgtcgatgaaccagaaaccaaagatctggtctttggctgaaaccgccacgaccccggac
aatcctcgcaaatccccacaaatcggcggttctcccgtgggttccgctgccacgtcgctc
ctgggccaacacagactattcgcctgccccatggggaaatttcagaactggacaaacaga
accttttcccaccaccccttggccttaatcaattcaaatcatttcctcggactcggcgcg
gctcaggcggccggcgtccccgcgttctgtacagtgagagaggggcggtctcagtcggcg
gaatctaccgtgacagatcgaagcagtgccttggaaatagagaaaaaattagtaaagaca
gcttttcaaccggttcagagacgaccgcagaatcaactcgatgcggcaatggttttatcg
gcgctctcctctgcatag
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