Leucoraja erinacea (little skate): 129705063
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Entry
129705063 CDS
T09122
Symbol
nfatc3a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3 isoform X1
KO
K17333
nuclear factor of activated T-cells, cytoplasmic 3
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04010
MAPK signaling pathway
leri04020
Calcium signaling pathway
leri04148
Efferocytosis
leri04218
Cellular senescence
leri04310
Wnt signaling pathway
leri04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129705063 (nfatc3a)
04310 Wnt signaling pathway
129705063 (nfatc3a)
04020 Calcium signaling pathway
129705063 (nfatc3a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129705063 (nfatc3a)
09143 Cell growth and death
04218 Cellular senescence
129705063 (nfatc3a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
129705063 (nfatc3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129705063 (nfatc3a)
Transcription factors [BR:
leri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
129705063 (nfatc3a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
129705063
NCBI-ProteinID:
XP_055504431
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All DBs
Position
17:9105828..9224092
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AA seq
971 aa
AA seq
DB search
MTTVNSGNDEFDFRLIFGEDSPQPGLGPADTEPDDSASFYNFNDCNQSSNIIQPIGIHHH
EAQTCSTIFSSPHPLQASNVQASKYSLVGAPKPFECPSIQITSISPNCPQGIGPNEEVHA
NGTDNDYLDRPSRDHLYLPLDPSYYRDSSLSPSPASSISSRSWFSDASSCESFSHVYDDV
DAELNEAAARFTLGSSPSGSPRCCPTDESWHPNYAYVNSVSPRQSPCHSPRASVTDENWL
SPRPTSRPSSRPTSPWGKRRHSSAEVCYAGSLSPHHSPTPSPGHSPRGSITEDTWLNNTL
LQGASSLSPGLIPFQCCPPETDIPLKSRKTSQDQAATVSGKIDLTSDDQGRLSPSVESPV
DDLSGTLHPLKKDLLSEQFLSVPSHFTWNKPKPGGHTPIFRTSSLPSLDWPLPSQYMQYD
LKIEMQPKTHHRAHYETEGSRGAVKSSSGGHPVVKLQGYNEKPINLQMFIGTADDRYLRP
HAFYQVHRITGKTVATASQEIIVTSTKVLEIPLLPENNMIASIDCAGILKLRNSDIELRK
GETDIGRKNTRVRLVFRVHIPQPNGKVVSLQASSIPVECSQRSAQELPQIEKYSINSCSV
TGGEEMIVNGFNFLPDSKVIFLEKGPDGRPQWEVEGKILREKFQGVNLVVEVPPYHNKNV
TSAVQVQFYVCNGKRKRSQSQRFSYMPVLIKREHNDELEMPTIPTLPLPIAHTANMSGLH
QVGSQLPSADTGHHENLTSASQRNLGPPLQQTYVSMISPSVPCLPHLPSRSISPGTECPI
MAPLGHQSFPKPAPPLGPSYQPMQSNMMYNGQPGLPMNSVSSQGYERISYQPDVVGPLQM
NLGCQQMQQMYCSPNPGPASSPSPTATHPLGHSPHSGQSSPQLHNLSGPPPLTHHNVCNP
SPFSTPERASLNIKQEPEDNELPFQTIGLQDITLDDVNEIIGRDMSQIPSSRATAQCACP
GALENEISDGV
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgactactgtaaacagtggcaatgacgagtttgactttagactgatatttggtgaagac
agtccgcagcccggactaggccctgcagatacagagcctgatgattctgcatcattttac
aactttaatgattgcaaccaatcgtcaaatataattcaaccaataggtattcatcaccat
gaagcgcagacatgttccacaatattttcatcgccgcacccactgcaggcttcgaatgtc
caagcgtcaaagtatagtctagtaggtgctcctaaaccatttgaatgtcctagtattcaa
atcacctccatctctcccaattgtccacaaggaataggacctaatgaagaagtgcatgca
aatggcacagataatgactatttggacagaccatccagggaccatctctaccttcctctt
gatccttcttattacagggattcatcgctaagtccaagtcctgctagcagcatttcttcc
aggagttggttttcagatgcttcatcttgtgaatctttctctcacgtatatgatgatgta
gacgctgagttgaatgaagctgctgctcgatttacacttggttcttctcctagtggatca
cctagatgttgtccaacagatgagtcgtggcatccaaattatgcttatgtaaattcagta
tcgcctagacaatcaccttgccattcacctagagctagtgttaccgatgaaaactggctc
agccctcgtccaacatcaagaccatcatccagacccacttctccctggggaaagcgccgg
cattcaagtgcagaggtctgctatgcaggctcactttcaccccaccattcacccacaccg
tctcctggtcactctccaagaggaagtatcacagaggatacctggctgaataacactctt
cttcagggtgcctccagtctaagtcctgggctcattccatttcagtgttgccctccagag
actgacatacctttaaaatcgaggaagacctcccaggatcaggctgctactgtgtcaggg
aaaatagatttgacttcagatgatcagggaagattatcaccttcagttgaatctccagta
gatgatctgtctgggactctacatcctttaaagaaagatttgttaagtgaacagtttctt
tctgttccctcacattttacttggaacaaaccaaaacctggtggccatacaccaattttt
cgtacatcatcgttgccttccttagattggcctttgccaagtcagtatatgcagtatgat
ctaaagattgaaatgcagccgaagactcatcacagggctcactatgagacagaagggagt
cgaggagcagtgaagtcgtcttcaggtggacacccggttgttaagcttcaaggttacaat
gaaaagccaatcaacctgcagatgttcattggaactgctgatgatcgctatttaagacca
catgcattctaccaggtgcacagaattacaggaaagactgttgccacagctagtcaggag
atcatagttaccagcacaaaggttcttgaaattccacttctacctgaaaacaatatgatt
gccagcattgactgtgcaggaattttgaaacttcgcaactctgatatagaacttcgcaaa
ggagaaactgatattggcagaaaaaatacaagggttcgccttgttttccgtgtgcatatc
ccacagcccaatgggaaagttgtctcgctgcaggcatcttccattcctgttgaatgctcc
caacgatctgcccaggaactccctcagattgaaaagtacagcatcaattcatgttccgtc
actggtggagaagaaatgattgtcaatggtttcaattttcttccggactctaaggttatc
ttccttgaaaagggcccagatggacgtcctcagtgggaggtcgaaggcaaaattctcagg
gagaaatttcaaggggttaatcttgttgttgaagttcctccttaccataataaaaatgtt
acatctgcagttcaagtacaattttatgtttgcaatgggaagagaaaaagaagtcagtcc
caacgcttctcttacatgccagttttaatcaagcgggaacataacgatgagctggaaatg
cccacgattcctactcttccattgcctattgcacatacagctaacatgtctggtctacat
caagttggatctcagctgccttcagcggatactggacaccatgaaaatttgacatctgct
tcacagaggaaccttggacctccactgcagcaaacatatgtatcgatgatttctccatca
gtaccatgtttgccgcatctgccatcaagaagcattagcccgggtactgaatgccctatc
atggctcccttggggcaccagtctttcccaaaaccagctccacctcttgggccttcttac
cagcctatgcaatctaacatgatgtataatggacaaccaggtcttcccatgaattctgtt
tctagccagggatatgagagaatatcttatcagcctgatgtagttggtccacttcaaatg
aacctgggatgtcaacaaatgcaacaaatgtactgttctccaaacccaggcccagcctca
tcgccatccccaacagcaactcatcctttgggacattcgccacactctggacaatcttca
ccacagctacacaatctatcagggccccctccactgacgcatcataatgtgtgtaatcct
tccccattttcaacaccagagagagcttcgctgaacattaaacaagagccagaggacaat
gagctacctttccagaccattggactgcaggatataacacttgatgatgtgaatgaaata
attggaagagacatgtcgcagattccatcttctcgtgcaacagcacagtgtgcctgccct
ggagctttggaaaatgagatatccgatggtgtgtaa
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