Leucoraja erinaceus (little skate): 129705077
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Entry
129705077 CDS
T09122
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129705077 (ctcf)
03036 Chromosome and associated proteins [BR:
leri03036
]
129705077 (ctcf)
Transcription factors [BR:
leri03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129705077 (ctcf)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129705077 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZNF142_18
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
Zf-C2H2_ZNF451
zf-C2H2_7th_ZNF462
zf-C2H2_15
zf-met
zf-C2HE
zf-C2H2_6
HMBD
Zn_ribbon_DUF2089
zf-WIZ
DUF7479
Motif
Other DBs
NCBI-GeneID:
129705077
NCBI-ProteinID:
XP_055504448
LinkDB
All DBs
Position
17:10267745..10293304
Genome browser
AA seq
723 aa
AA seq
DB search
MATETDIVPVEESEMFTKVKEHKTYQRRREGGQSEDSDGQQKEPDVAEVAQAMNSNMQVV
MMQPLDPTLLQMKQPMEGAAHESDTVDDTQIITLQVVNMEEQPINIGELQLVQVAQSSID
ELQGNYENEAPKDGLQEGDPVICHTLPLPEGFQVVKVGANGEVETVEDGAVEVREEDDSS
AAWQKDPDYQPPVKKIKKKKNKLRYKVDDSKDVDLSVYDFEEEQQEGLLSEVNVEKAVGT
MKPPKPMKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTL
LRNHLNTHTGTKPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQ
KHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYLESGKKCRYCDAVFHERYALIQHQKS
HKNEKRFKCELCDYACKQERHMVMHKRTHTGEKPYSCNQCDKTFRQKQLLDMHFKRYHDP
SFIPATFMCSKCSKAFTRKNTMTKHAENCSGPGGEEGDAAERKKSKGRGRKRKMQSKKGD
SSDSDEDDVAEPDLDGDEDDEPDVGKAEKEEDEEEEEEPPVVEVIPIPTPTKKRRGRPPG
KSNQANKNAGTGQQLQETGATTIENIIVEIKKEPEAEDVQVQAGIEAQNGDITPEMILSM
MDR
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgaaacagatattgtgccagtggaggagtctgaaatgtttacaaaggtcaaa
gagcacaaaacctatcaacggcgacgagagggtgggcaatcagaagattccgacgggcag
cagaaagagccggatgtcgctgaggtagcacaagccatgaacagcaacatgcaggtggta
atgatgcagccattggaccctacgttattacaaatgaagcagccgatggagggtgcagct
catgagtcagatacagtagatgatacacaaattattacactgcaagtggtgaacatggaa
gaacagccaataaacattggggaattgcaactagtgcaagtagcccaaagtagcattgat
gaactacagggaaactatgaaaatgaagctcccaaagatggacttcaagaaggggaccca
gtaatctgtcatactcttcctttaccagaaggttttcaggttgtgaaagtaggcgctaat
ggtgaagtggagacggtagaagatggggcagtagaagtaagggaagaagatgatagttct
gctgcatggcagaaagatcctgattaccaaccaccagtcaaaaaaattaaaaagaaaaag
aataaattgcgctacaaagtggatgattccaaagatgttgacttgtctgtatatgatttt
gaagaggagcagcaagaaggtttgctttcagaggttaatgtggagaaggcagttggaaca
atgaagcctccaaagccaatgaaaattaaaaagaaaggggtaaagaagacattccagtgt
gaattgtgcagctatacttgccctcgacgttccaacctagatcgtcacatgaaaagccac
acagatgagcggccgcataagtgtcacctttgtgggagagcctttcgaacagtcacactg
ttgagaaatcatctcaatacacacacaggtactaaaccacataagtgccctgattgtgat
atggcatttgtaaccagtggagagttggtgaggcaccgtcgctacaaacacacccatgag
aagccatttaaatgttccatgtgtgactatgctagtgtggaggtcagtaagttaaagcgc
catattcgctctcatactggagaacgcccgttccaatgtagtctttgcagctatgccagc
agggacacctataaactgaagcgccacatgaggacccactccggtgagaaaccgtatgaa
tgctacatttgtcatgctcgcttcactcaaagtggaacaatgaagatgcatattttacag
aaacatacagaaaatgtggccaagtttcactgtccacattgtgacaccgtcattgctaga
aaaagtgatttgggtgttcatttgagaaaacagcattcctatcttgagtcaggcaaaaag
tgccgttattgtgatgcagtcttccatgagagatatgccctcatacagcatcaaaaatct
cacaagaatgagaaacgtttcaaatgcgaactttgcgattatgcatgtaaacaggaacgt
cacatggtgatgcacaaacgtactcatactggagaaaagccttattcgtgcaaccagtgt
gataaaacctttcggcagaaacaactgttggacatgcacttcaagcgctaccatgatcct
agttttattcctgctacgtttatgtgctcaaaatgttcaaaagccttcactcgtaagaat
acgatgacaaaacatgctgagaattgtagtgggccaggaggtgaggaaggagatgcagca
gaacgcaagaagagcaagggacgagggaggaagcggaaaatgcaatctaagaaaggagat
tcttctgatagtgatgaagatgatgttgctgaacctgatctagatggagatgaagatgat
gagcctgatgtgggcaaggctgagaaagaggaagatgaggaggaggaggaggagcctcct
gttgttgaagtcatcccaataccaacgccaaccaaaaaacgaaggggccgaccacctgga
aaaagtaatcaagcaaacaagaatgctggaacaggtcaacaattacaagaaacaggggct
acaactattgaaaacatcattgttgagataaagaaagagcccgaggcagaagatgtacag
gtgcaagcaggaattgaggctcagaatggagacatcacacctgagatgatcctcagtatg
atggaccggtga
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integrated database retrieval system
