Leucoraja erinaceus (little skate): 129705169
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Entry
129705169 CDS
T09122
Symbol
smpd3
Name
(RefSeq) sphingomyelin phosphodiesterase 3 isoform X1
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri00600
Sphingolipid metabolism
leri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
129705169 (smpd3)
Enzymes [BR:
leri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
129705169 (smpd3)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
129705169
NCBI-ProteinID:
XP_055504590
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Position
17:complement(14435654..14602036)
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AA seq
685 aa
AA seq
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MVLYTSAFPNSFLQTLHSLAWGLIFPCYWFADRLLVSFLPTTYEKHQRGDDPCYLRALCL
TIVIPVCLALLLTSLPFALVGFVIWAPLQSARRPYVYSKFEDGSETGGATGPGNWKALGG
KSFCFATANVCLLPDSLARFNNLSNTQLRSCEVGRRIRNGASRPQIKIYIDSPTNTSISA
ASWSSLVCPHPNENNRANSTGIKRTSSMDYKGDNFIGNCSEDSKDSKLGWEQSDGDSNSC
IVRICSEEATSSAGKEADACSVQVTITQPTEPGEVETEDQNDQTPNHRQKEGDRSSLDSN
NTSRESLIKFRIIDGMTDSGTTSNNKFVHKASVMKKSSVKKKRHHGENFDHELSAFFPAN
LDFLCLQEVFDKRSAERLKAQLNPYFQYVLYDVGTYAWRRCCSFKFLNSGLFFASRYPIL
DVEFQSYPNGKGSDSLAAKGALFVKVHVGTTPQDQRIVGYVSCTHLQALPGDAAIRCEQM
DHLLSWLAEFRKSTSSPNTEELLAFDVLCGDFNFDNCSAEDKLEQQHSLFTQYKDPCRLS
PGEEQPWVIGTLMDPEGLYDEDTVTPDNLQKVLESEEGRREYLVFSHCKNQPASQKGRKV
PMKGCGRRIDYALYSEEGLNPDWKMVQITLLLKPKRLMSDSKGNEWHHPMVKERTPQAVW
IGWRMRPNGELYPKVNISAMSQLSL
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggttttgtacacgtctgcttttccaaattccttcctacaaacccttcactccctggcc
tgggggctcatatttccttgctactggtttgccgaccggttgttggtgtccttcctgcct
accacctatgagaaacatcaaaggggagatgatccatgctacctgagggcactctgtctc
accattgtcattcctgtctgcctggctttgctgctcacctccctcccattcgcactggtg
ggttttgtgatctgggcccctctccagtctgcccgcagaccctatgtttactcaaagttt
gaggatggctctgagaccggtggggcaacagggccgggcaactggaaggcattgggtggc
aagagcttctgcttcgccacagccaatgtctgcctcctgcctgattctttggcccgcttc
aacaacctctccaacacccagctgaggtcctgcgaggtgggcaggagaatccggaacggt
gccagccggccccagattaagatttacatcgactccccgaccaacacatccattagtgct
gcaagctggagcagcctggtctgcccgcaccccaatgagaacaaccgggcaaacagcacg
gggatcaagaggacttcctccatggattacaaaggggacaacttcattggaaactgcagc
gaggacagcaaggactccaagctgggctgggagcagagcgatggggacagcaactcctgc
attgtccgcatctgcagtgaggaggcaacgtcttcggctggcaaggaggcagacgcctgc
agtgtgcaggtcaccataacccagcccacggagccgggagaagttgagactgaggaccaa
aacgaccagaccccaaaccacaggcagaaggaaggagacaggagcagcctggatagcaac
aatacgtccagagaatccctgatcaagttcaggatcattgatgggatgacagacagtggc
accacctccaataacaagtttgtccacaaggcctcggtcatgaagaagtcatccgtgaag
aaaaagagacaccatggtgagaactttgaccatgagctgtcggccttctttcccgccaac
ctggacttcctctgcctgcaggaggtcttcgacaagcgatcggcggagagattgaaagcg
cagctgaacccctacttccagtacgtgctgtacgatgtggggacctacgcttggcgacgc
tgctgcagcttcaagtttttaaacagcggtctcttttttgccagccgctacccaatttta
gacgttgaatttcagagctatcccaatgggaaaggaagcgactcgctggcagccaaggga
gccctttttgtaaaggtgcatgttggaaccacacctcaggaccaaagaattgtgggttat
gtttcctgcactcatttgcaagctctgccaggagatgccgccattcgctgtgaacagatg
gaccacctgctgagctggctggccgagttccgaaaatctacctcttcacccaacacagag
gagctgctggcattcgatgttctgtgtggggatttcaactttgataactgctccgcggag
gacaagctagaacagcaacattctctcttcacccagtacaaggatccctgccgcctgagc
cctggagaggagcagccctgggtcattggtacgttgatggacccagaaggactctatgat
gaagatactgtcacaccagataatctgcagaaggtgctggagagtgaagaaggtcgcagg
gagtatctggtcttctcccactgcaagaaccagccagcttctcagaaggggaggaaggtg
ccaatgaagggctgtggacggaggatcgactacgctctgtactctgaggaaggcctgaac
cccgactggaaaatggtacagatcactcttctactgaagccaaaacggttaatgtctgat
agcaaaggcaatgaatggcatcatcctatggtgaaagagagaactccacaggcagtgtgg
attgggtggagaatgagaccaaatggagagctttacccaaaggtcaacatcagtgcaatg
agccaactgtccttgtga
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