Leucoraja erinaceus (little skate): 129705201
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Entry
129705201 CDS
T09122
Symbol
amfra
Name
(RefSeq) autocrine motility factor receptor a isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04137
Mitophagy - animal
leri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129705201 (amfra)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129705201 (amfra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129705201 (amfra)
Enzymes [BR:
leri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
129705201 (amfra)
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129705201 (amfra)
Multi subunit type E3
ERAD complex
129705201 (amfra)
LMBR1L-GP78-UBAC2 complex
129705201 (amfra)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
SVIP
Prok-RING_4
zf-C3HC4_4
zf-RING_Vps41
zf_RING_Vps8
zf_RING_Vps8_fungal
RING_Ste5
Motif
Other DBs
NCBI-GeneID:
129705201
NCBI-ProteinID:
XP_055504642
LinkDB
All DBs
Position
17:complement(15844430..15890483)
Genome browser
AA seq
708 aa
AA seq
DB search
MPLLFLERFPWPSLRLYTALSAVLLAASLFSAYSHLSLPPGQAPISVPRYHPNLGTPTPI
DAISGDLPAAEANSDGDTGADREQRVHPGAGIYVDHGEPDLGLSGRPEWAQGHGFALEIA
WYLVSDGWCIWVLVNTACCFLMLIGKLIQYVVFGTLRVSERQHLKDKFWNFIFYKFIFIF
GVLNVQTVEEVVMWCLWFAVLVFLHLIVQLCKDRFEYLSFSPTTPMSSHVRVLALLVSML
LSCCSLAVVCVLVGYSHGMHTLSFMAAECLVVTVRTAHVILRYFIHLWDLNHEGTWESKG
TYVYYTDFIMELKLLSVDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRLKRHKN
YLRVVGNMEARFAAATPEELASNDDDCAICWDSMQSARKLPCGHLFHNSCLRSWLEQDTS
CPTCRMSLNINEDRRVGEPHRRDNLDENIGPVPVVDGRPHLNHHNHFFHFDGSRIASWLP
SFSVEVMHTTNILGIAQANNSQLNAMAHQIQEMFPQVPYHLVLQDLQLTRSMEVTTDNIL
EGRIQVPFPQQRQDSRPALNGAVVEEDNGNPDDLNSEQQTERSALESSQSMGETFGTGTE
LLRADLPSEDFEARGSRFSKSTDERQQMLVQRKEELLLQARRRYTNRNQNETDRSSNGDV
SSGSSSNSISLSLRRQALAVAAERRRLQQQQDSGFDDARLRTRNLDTS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgcttttcctcgaacgcttcccttggcccagtctgaggttgtacacagccctc
agcgcggtactgctcgccgccagcctcttcagcgcctactctcacctcagcctgcccccg
ggccaagctccgatctctgtccctcgttaccatcccaacctcggcactcccacccctatt
gacgccataagcggcgatctaccggccgccgaagccaacagcgacggggataccggagca
gaccgcgagcagcgcgtccaccccggcgcagggatctacgttgaccatggtgagcccgat
ttgggactctcgggcagaccggagtgggctcaaggccacggattcgccctggaaatagcc
tggtacctggtatcagacggctggtgtatttgggtgttggtgaacacagcctgttgtttt
ctaatgttgattggaaagctgatccagtatgtcgtgtttggaactctgcgggtcagtgaa
agacagcatctgaaggataaattttggaatttcattttctacaaatttatcttcatattt
ggtgtgctgaatgttcaaacagtggaggaggtggtgatgtggtgcctttggtttgctgtt
cttgtcttccttcacctcatagtccagctctgcaaagaccgctttgaatatttatctttc
tcaccaactactccaatgagtagccatgtcagggtgttggcattgctggtttccatgtta
ttgtcctgctgtagtctggctgtggtttgtgtgctggttggatattcgcatggaatgcat
actctgtcttttatggcagctgagtgtttggtggtgaccgttcgaacagcacatgttatt
ctgaggtactttattcatctttgggacctgaatcacgagggcacttgggagagcaaaggc
acctatgtttattacacggattttatcatggaattgaaacttctctcagttgacctaatg
catcacattcacatgctgttgtttggaaatatttggctatcaatggcgagcctggtgata
ttcatgcagctccgttatcttttccatgaagtccagcgtcggttgaagcgtcacaaaaac
tacttgcgtgtggtgggcaacatggaggcaaggtttgcagccgccactcctgaggaattg
gcttccaatgatgatgattgtgccatctgctgggactcgatgcagtctgctcgcaaactc
ccctgtggtcatctcttccacaactcctgccttcgttcctggcttgagcaggacacctct
tgtcccacctgtagaatgtcactcaacattaacgaagatcgccgtgttggggaacctcat
cggcgagacaacttggatgagaacattggtcctgtaccagttgtagatggcaggccacat
cttaatcatcacaaccacttcttccattttgatggatcacgtattgctagttggctgcct
agtttctcagtggaagtgatgcatacaacaaatatccttggcattgcacaggccaataat
tcccagctcaatgctatggctcatcagatccaggagatgtttccccaagttccgtatcat
ttggtactccaggacctacagttaacgcgttcgatggaagtcactactgataacatacta
gaaggaagaattcaggttcctttcccccagcagcgacaagatagtagaccagcattaaat
ggtgcagttgtggaagaagacaatggtaatccagatgatttgaacagtgaacagcagact
gagcgatcagcccttgaatccagtcaaagtatgggagaaacattcggaactggaactgag
cttctacgagctgaccttccatcagaagattttgaggcacggggaagtcggttctcaaag
tcaacagatgagagacagcaaatgttagtgcagcgtaaagaggagctactgctgcaagca
cggaggcggtacacaaacagaaaccagaatgaaactgaccgttcatctaatggtgacgtg
tcctctggatcatcatcgaacagtatttctctttctttacggcgtcaagccttggcagtt
gcagccgaaagaagacgccttcagcagcagcaggactctggttttgacgatgcaagactg
agaacacggaatcttgacacatcctga
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integrated database retrieval system
