Leucoraja erinaceus (little skate): 129705204
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Entry
129705204 CDS
T09122
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129705204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129705204
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
129705204
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
129705204
NCBI-ProteinID:
XP_055504645
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All DBs
Position
17:16020884..16032270
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AA seq
226 aa
AA seq
DB search
MSVVPPSRSQAGWPRGVSQYGNKYLQAKPLTLERTINLYPLTNYTFGTKEPLYEKDCSVA
ARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPTEDEVEGL
KRLMTEILGRQDGVQQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQE
KALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggttccaccgagccgctcgcaggctggctggcctcgaggtgtctctcagtat
gggaacaaatatctgcaggccaagcccctgaccctggaaaggaccattaacctgtatcca
ttgaccaactacacatttggtacgaaggaaccgttatatgaaaaagattgctcggttgct
gctcgatttcagcgcatgagggaggaatttgacaagatcggcatgagacgcacggtggag
ggagtcctgattgttcatgaacacaggctgcctcatgttttattgctgcaattgggaaca
accttctttaaattacccggtggagagctaaatcctacagaagatgaagtggagggcttg
aagcgacttatgactgagattttaggccgtcaagatggtgtgcagcaagactgggtaatt
gatgattgcatcggaaactggtggaggccgaattttgagccccctcagtatccctacatt
ccagctcacatcaccaaacccaaagagcacaaaaagttattcttagtgcaacttcaagaa
aaagccctttttgcagttccgaagaattacaagctggttgccgctccgttatttgaactt
tatgacaatgctcctggttatgggcccattatctccagccttcctcagcttttgagcagg
tttaattttatttataactga
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