Leucoraja erinaceus (little skate): 129705229 Help Entry 129705229         CDS       T09122                                  Symbol sf3b3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism leri  Leucoraja erinaceus (little skate) Pathway leri03040   Spliceosome Brite KEGG Orthology (KO) [BR:leri00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     129705229 (sf3b3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:leri03021]     129705229 (sf3b3)    03041 Spliceosome [BR:leri03041]     129705229 (sf3b3)    03036 Chromosome and associated proteins [BR:leri03036]     129705229 (sf3b3) Transcription machinery [BR:leri03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      129705229 (sf3b3) Spliceosome [BR:leri03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     129705229 (sf3b3)  Complex B     129705229 (sf3b3)  Complex C    U2 SnRNP specific factors     129705229 (sf3b3) Chromosome and associated proteins [BR:leri03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      129705229 (sf3b3)     TFTC complex      129705229 (sf3b3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Motif Other DBs NCBI-GeneID:  129705229 NCBI-ProteinID:  XP_055504685 LinkDB All DBs Position 17:complement(18452320..18494253) Genome browser AA seq 1217 aa AA seqDB search MFLYNLTLQRATGISHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEAFG IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNIFDKVHQETFGKSGCRRIVPGQY LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADSDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPASTAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILTCQIADLANEDT PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEYDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSTDVVCMSLANVPPGEQ RSRFLAVGLIDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAEKQDELGEKGSI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVSFS LQYTPRKFVIHPESNNIIVIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPESIFGSPKAGSGQWASVVQVMNPIQGTVYDQIQLEQNEAAFSVAVCKFANGG DDWYVLVGVGKDLILNPRSIGGGFVYTYKLINSGEKLEFVHKTSIEDVPTAIAPFQGRVL VGLGKLLRIYDLGKKKLLRKCENKHIPNFIVAIHTIGHRVIVSDVQESFFWIRYKRNENQ LIIFADDTLPRWITTACLLDYETMAGADKFGNISVVRLPPNTSDDVDEDPTGNKALWDRG LLNGASQKAEIIVNYHVGESVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHLEMHMRSEHPPLCGRDHLSFRCYYFPVKNVIDGDLCEQFNSMDPIKQKSVAEELDRT PAEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtttttatataatctgacccttcaaagggcaactggcatttcacatgccattcacgga aacttctcaggcaccaaaatgcaggagattgttgtttcccggggaaagatcttggagttg ctccgtccagatgcaaatactgggaaggtgcacacactgttgacggtggaggcctttggg ataattcgttctttaatggccttccggttaactggaggtaccaaagattacatagtagta ggcagtgactctggcagaattgttatcctggaataccagccatccaagaatatctttgac aaagttcatcaagaaaccttcggaaagagtgggtgccgtcgcattgtgcctggccagtac ttggcagttgatccaaaaggccgtgctgtcatgataggtgccattgagaagcaaaagttg gtctacattctgaacagagatgctgctgctcgccttactatttcctcaccgctagaagcg cataaagcaaatactctggtatatcatgtagttggtgtcgatgtgggctttgaaaaccct atgtttgcttgccttgagatggattatgaggaggcggatagcgatcctacaggtgaagct gctgctaatactcaacagacattgacattctatgagttggacctgggcttgaaccatgtt gtgaggaagtacagtgaacctctggaagaacatggcaacttcctgattacagttccagga ggctctgatggacctagtggtgttctaatctgttctgaaaattacatcacatataaaaac tttggagatcagcctgatatccgatgtcctattcccaggaggaggaatgacctggatgac cccgagagaggaatgatctttgtctgttctgcaacacacaagacaaagtccatgttcttc tttctagcacaaactgaacaaggcgacatcttcaaaatcacactcgaaacggatgaagac atggtgactgaaatcaggctgaagtattttgatactgtacctgcatccactgccatgtgt gtgctgaagactggatttctctttgttgcttcagaatttggcaaccattacctttatcaa attgcacatctgggagatgatgatgatgagccagaattttcttcagccatgcccttggag gaaggagataccttttttttccagccacgacctctcaaaaacttggtattagtggatgag ctggacagcttgtcaccaattttgacatgccagattgctgatttagcaaatgaagacaca cctcagttatatgtggcttgtgggagagggccaagatcatccttgagagtcttgagacat ggtcttgaggtatcagaaatggctgtctcagagctgcccggtaatccaaatgctgtatgg actgtaagaagacatgtggaagatgagtatgatgcatacatcatagtgtctttcgtgaat gctacactggtactgtctattggtgagaccgtagaggaagtgactgattctggatttctg ggtaccacccccacactctcttgttccttgcttggtgaggatgccctggttcaggtgtat cctgatgggatccgtcacatccgtgctgataagagagtcaatgagtggaagactcctggt aaaaaaacgatcgtgaaatgtgcagtgaatcagcgacaggttgtgattgcgctaacaggc ggggagctggtttactttgagatggatccatccggacaactgaatgaatacacggaacgt aaagagatgtcaactgatgtagtctgcatgagtttggccaatgttcctccaggggagcaa cgttcacgatttctggctgtgggtctcatagataacacagtcaggattatttctctggat ccctcggattgtctgcagcctctcagtatgcaagctcttcctgcgcagcctgaatctctc tgcattgttgagatggggggtgcagaaaaacaagatgaattaggagaaaagggatccatt ggcttcttgtacttaaatattggtttacagaacggtgtattactaaggacagtgttggac ccagtcactggcgacctatctgacacaagaaccaggtatcttggatcacgacccgtcaag cttttcagggtcagaatgcaaggtcaagaagcggttttggccatgtcgagcaggtcatgg ttgagctattcgtatcagtcccggttccacctgactccgttgtcctatgaaactctagaa tatgcatctggatttgcctctgaacagtgtcctgagggtattgtagccatctccactaac acactgcgaatcttggcactcgagaagctgggggcagtattcaatcaggtctccttttct ctgcagtataccccgaggaagtttgtcatccacccagagagcaacaatatcattgtaatc gagactgatcacaatgcctacactgaggccaccaaagcccaacgcaaacaacaaatggct gaggaaatggtggaagcagctggtgaggatgagcgagaattggcagcggagatggcggct gctttcctgaatgagaatttgccggaatccatttttggatcccccaaggctgggagtgga cagtgggcatcagtcgttcaagtgatgaaccctattcagggcactgtgtatgatcaaata cagttggaacagaatgaggcagcattcagtgttgcagtttgtaaatttgcaaatggtggt gatgattggtacgttctagttggggtcggcaaggacctgatcctcaatccccgttcaatt ggaggtggatttgtttacacatacaaactaatcaacagtggcgagaaactggaatttgtg cacaagacatccattgaagatgttccaacagccattgcacctttccagggacgtgttctg gtgggtttgggaaaactcctacgcatctatgatctggggaaaaaaaagctgctgagaaaa tgtgaaaataagcacattccaaatttcatagtagcaatccacacgattgggcaccgggtg attgtctcagatgtacaggaaagcttcttctggattcgatacaaacgaaatgagaaccag cttatcatctttgctgatgatacattaccacgctggatcaccacagcttgtctattagac tacgaaaccatggctggtgctgataaatttggcaacatcagcgtggtgagattgccgcca aacacaagtgatgatgttgatgaggatcccacaggaaacaaagctttgtgggatagaggt cttctcaatggagcttcccaaaaggctgagatcattgttaattatcatgtgggagaatca gtgctttcgctacagaaaacaacattaattcctggtggttcagaatctcttgtatataca acactctctgggggaattgggatcctggtcccattcacatcacatgaggatcatgatttc ttccagcacctagagatgcacatgagatcagaacatcctcccctgtgtggtcgtgaccat ctgagtttccgctgctactacttccctgtgaagaatgtaatcgatggtgatctttgtgaa cagtttaactctatggatccgattaaacaaaagagtgttgcggaagagttggacagaaca ccagctgaggtgtccaaaaagctggaagacatcagaacacgttatgcattctaa

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