Leucoraja erinaceus (little skate): 129705235
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Entry
129705235 CDS
T09122
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129705235 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129705235 (exosc6)
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
129705235 (exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
129705235
NCBI-ProteinID:
XP_055504695
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All DBs
Position
17:18877875..18880577
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AA seq
274 aa
AA seq
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MPVDTKRVRGPDETQSPLLFVRLDAEPKPVPLLPRADGRSAAEPRPVFARAGLVSQADGS
VYAECGRSKVLCAVYGPREIERKEERRLSGAALGCEFRFAPFSCKKRAAWIQGNLEKEYS
SIMEQSLQPAVCLHKYPRSQIDVYVIVLENDGSTLAAALTCASMALAEAGIEMFDVVVGC
SLRQCGATSLLDPTALEEFNAASSKGVDNGSMTVALLPTLNQISGLVSKGEWEEQTSVEA
IKACVEGCQKLYSVVQQCLTRSVKRKIPEFVSKA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggacaccaaacgggtgcgcggcccagatgaaacgcaatctccgctgttgttc
gtccggttggatgcagaaccgaaacccgtgcccttgctgccgcgggcggacgggcgttcc
gccgccgagccgaggcccgtgttcgcccgggctgggctggtgagccaggcggacggctcg
gtgtacgccgagtgcggccggagcaaggtgctgtgcgctgtgtacgggccccgcgagatc
gagcgcaaagaggagagacgtctgagcggcgccgccctgggctgcgagttcagatttgcc
cctttctcctgcaagaaaagagctgcttggattcagggcaacctggagaaggagtactcg
tcgatcatggagcagagtttgcagcctgctgtctgcctccataagtatcccaggtcccag
attgacgtgtatgttatagttctggagaatgacggctccaccctggcagctgcactgacc
tgtgcctccatggcactggcagaagcaggcattgagatgtttgacgttgttgtgggctgc
tccttaaggcagtgtggtgctacctccctcttagacccgactgcgcttgaggagttcaac
gcagccagctccaaaggtgtggataacggcagcatgactgtagcactgctacccactctt
aaccagatctcagggcttgtgtcaaaaggagagtgggaggaacagacgtcagtggaagcg
atcaaagcttgtgtcgaaggttgccagaaactctactccgtggtccagcagtgtctaacc
agatcagtgaagaggaagatccctgagtttgtcagtaaagcttag
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