Leucoraja erinaceus (little skate): 129705417
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Entry
129705417 CDS
T09122
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129705417 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
leri01007
]
129705417 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
leri03016
]
129705417 (kars1)
Enzymes [BR:
leri01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
129705417 (kars1)
Amino acid related enzymes [BR:
leri01007
]
Aminoacyl-tRNA synthetase
Class II (A)
129705417 (kars1)
Transfer RNA biogenesis [BR:
leri03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
129705417 (kars1)
Prokaryotic type
Other AARSs
129705417 (kars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF374
T6SS_Tle1-like_C
DUF1104
Motif
Other DBs
NCBI-GeneID:
129705417
NCBI-ProteinID:
XP_055504947
LinkDB
All DBs
Position
17:37557717..37599748
Genome browser
AA seq
614 aa
AA seq
DB search
MMASTMLRLLGLQMAEICKVRGQWGKVPIHQFASFTALFQKRLHDEKSEQKRRMKAEKKA
AEKEIKMKELAEKEAPKEENDEICFGGDEETLDPNQYFKIRTLAIQQLKGTEEDPYPHKF
HVDLSLTEFIEKYNHLQPGDHLANINLTLAGRIHAKRASGAKLIFYDLRGEGVKLQVMAN
SKNYTSEEQFIKVNNKLRRGDIIGVEGNPGKTKKGELSIIPKEIKLLSPCLHMLPHLHFG
LRDKETRYRQRYLDMILNDYVRLKFITRAKIITYLRTFLDNLGFLEVETPMMNIIPGGAV
AKPFITHHNELDMDLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCE
FYMAYADYNDLMKITEKLLSGMVKHITGGHKITYHPEGPEGPSYEVDFTPPFKRLSLTAD
LEKTLGEKFPSPDQYGTEETRKFFDDLCARKGVECSSPRSTSRLLDKLVGEFLEVTCINP
TFICDHPQIMSPLAKWHRTFKGLTERFELFVMKKEICNAYTELNDPVKQRELFEEQAMAK
AAGDDEAMFIDDNFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLFFPAMKPEDNK
KERPDATENAPPTN
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgatggccagcaccatgcttaggcttcttgggttgcagatggccgaaatctgcaaggtc
aggggtcaatgggggaaggtgccaatacaccaatttgcttcctttactgctcttttccag
aagagactacatgatgaaaaaagtgagcagaaaaggcgaatgaaagcagagaagaaagct
gctgagaaggaaatcaaaatgaaagaattggctgaaaaggaagctcccaaagaagaaaat
gacgaaatctgctttggtggagatgaagagacacttgatcctaatcaatatttcaaaata
cggacactggccatccagcaactgaagggcactgaagaggatccatatcctcataaattc
catgtcgatctctccttaacagagttcattgaaaagtataatcatctgcagcctggtgac
catctcgctaatattaatttgaccttggcaggtcgcatccatgccaaacgagcctctggc
gccaaattaattttctacgacctccgtggtgaaggagtcaagctacaggtcatggcaaat
tccaaaaattacacatctgaagagcaattcattaaggtcaacaataagctccggcgtggt
gatattattggagtggaaggaaacccaggaaagacaaaaaagggggagctcagtataatc
cccaaagagataaaactactatctccctgcctacacatgttgcctcacttgcactttgga
cttcgagataaggaaactagatatcgtcagaggtacctggacatgatcttaaatgattat
gtgaggctgaaattcatcaccagggccaaaattatcacctatctacggacatttttagat
aatcttggatttcttgaggttgagacgcctatgatgaatataattccaggtggagctgtt
gccaagccttttattactcatcataatgaattggacatggatttgtacatgcgaatcgca
ccagagctttatcataagatgctggttgtgggaggtattgacagagtgtatgaaattggc
cgccaatttaggaatgaaggcattgatctcactcacaatccagaattcaccacttgtgag
ttttacatggcctatgcagattataatgacctgatgaaaatcactgagaagcttctttca
ggtatggttaaacacataacaggtggtcataagattacataccaccctgaagggcctgaa
ggcccgagttatgaggttgacttcacaccaccattcaagcgtctcagtttgacagcagat
ttggagaaaactctgggagagaaatttccaagtcctgatcaatatggtactgaagaaact
cgtaaattctttgatgacctatgcgcccggaaaggtgttgaatgttcatctccgagatct
acatccaggcttttagataagttggttggtgaattcctggaggttacttgcattaaccca
acattcatctgcgaccatccgcagatcatgagtccattggccaagtggcatcgaaccttc
aagggtttgacagagcgatttgaactttttgttatgaaaaaggagatttgcaatgcgtac
acagaattgaatgaccctgttaaacagagagaactatttgaagaacaggctatggctaaa
gctgctggtgatgacgaagccatgtttattgatgacaacttctgtactgctttggagtat
ggacttcctcccacagctggatggggtatgggcatagatagactcactatgttcctgacg
gattctaacaatatcaaggaggtcttgttcttcccagcaatgaaaccagaggacaacaaa
aaggaacgtcctgatgcaactgaaaatgcaccacctacaaactag
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