Leucoraja erinacea (little skate): 129705476
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Entry
129705476 CDS
T09122
Symbol
ap1g1
Name
(RefSeq) AP-1 complex subunit gamma-1
KO
K12391
AP-1 complex subunit gamma-1
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129705476 (ap1g1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129705476 (ap1g1)
Membrane trafficking [BR:
leri04131
]
Endosome - Golgi transport
Others
AP-1 complex
129705476 (ap1g1)
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
Katanin_con80
Motif
Other DBs
NCBI-GeneID:
129705476
NCBI-ProteinID:
XP_055505040
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Position
17:43322880..43460557
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AA seq
820 aa
AA seq
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MPAPIRLRELIRTIRTARTQAEEREMIQKECASIRSSFREEDNTYRCRNVAKLLYMHMLG
YPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQG
LSLCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATK
NLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGI
SDPFLQVRILRLLRMLGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIK
SESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVS
IKRRAMELSFALVNGNNIRGMMKELLYFLDLCDPDFKADCASSIFLAGEKYAPSKRWHID
TIMKVLTTAGSYVRDDAVPNLIQLITNGVEMHAYTVQKLYKAVWEDISQQPLVQVGAWCM
GEYGDLLVSGQCEEEEPIQVTEDEVMDVLENVLQSSMSTSVTRGYSLTAIMKLSTRFTVN
VNRIRKIISIYGSSIDVELQQRAVEYNALFKKFDHMRSALLERMPIMEKVTTNGPTDIAQ
TNGEAEPIIVDAKLASITIQPSNQANDLLDLLGGSDVTPVIQTLPPSKPNSVGGELLDLL
GGLDLSGGTLPLGVQAPQFSQTPFLLDNLASQPVFNDLSSGIPPVTAYSKGGLNIDFNFE
RSNTNPNVTVVTINATNSTEEDMMDFVFQAAVPKTFQLQLLSPSNNVIPARSAGAVTQVI
KVLNPQKQHLRMRIKVTYNLNGSPVQDLAEVNNFPPQSWQ
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgccagcccccatcagattaagggagctaatccggactatccggacagccaggacgcag
gctgaggaacgggagatgatacaaaaggaatgtgcttcaattcgttcttcattcagagaa
gaagataacacctatcgttgtcgaaatgtggcaaaattattgtatatgcatatgctagga
tatcctgcacactttggacagttggagtgcctaaaattgatagcctcacaaaagtttaca
gacaagcgtattggttacctgggtgcgatgttattgctcgatgaacggcaagatgttcac
ctgctcatgacaaattgtattaaaaatgatttgaatcatagtactcaatatgttcaaggt
ctgtcactctgtacacttggctgcatgggatcatcagagatgtgtcgagatcttgcagga
gaagtggaaaaactactaaagacatccaactcatacctaagaaaaaaggcagcattgtgt
gcagtgcatgtaattaggaaagtgccggaactcatggaaatgtttctaccagctacaaaa
aatctgctgaatgaaaaaaatcatggtgtacttcacacatccgttgttcttcttactgag
atgtgtgaacgaagtcctgatatgttagcacacttcaggaaattggttcctcagcttgtt
cgaatcctgaaaaatcttatcatgtctggttactcaccagagcatgatgtctctggcatt
agcgatccgtttcttcaggttcgaatattacggttattacgaatgttaggcagaaatgat
gatgactcaagtgaagctatgaatgacattcttgcacaggttgcaacaaatacagaaacc
agcaaaaatgtgggtaatgcaattttatatgaaaccgttttgacaattatggacatcaag
tcagagagtggactaagggttttagccatcaatatcttgggacgattcttgctaaacaat
gacaaaaatattaggtatgtggcactaacatcgctgctcaaaactgtccaaacagatcat
aatgcagtccaaaggcatagaagtacaatagtggattgtttgaaggacttggatgtgtct
attaaacggcgtgcaatggaactgagcttcgctcttgtaaatgggaataacattagagga
atgatgaaggaattactctatttcctggatttatgtgatcctgatttcaaagctgattgt
gcatcgagcatctttcttgcaggagaaaaatatgcaccatccaagaggtggcacattgac
accatcatgaaagtcttaacaacagctggaagttatgtaagagatgatgcagtgcctaac
ttgatccagttgataacaaacggtgttgaaatgcatgcctatactgtacagaaactttac
aaagcagtctgggaagacatctctcagcaacctcttgtacaagtcggtgcttggtgcatg
ggagagtatggtgatcttttagtttctggccaatgtgaagaagaagagcctattcaggtg
acagaagatgaagttatggatgtattagaaaatgttctacagtctagcatgtcaacatct
gtaacaaggggatattcgctcactgcaattatgaaattaagcacaagatttactgtaaat
gtcaatcgaatcagaaagataatatctatctatggaagcagcatagatgtggaacttcag
caaagagcagttgaatacaatgcacttttcaaaaaatttgatcacatgaggtcagcactg
ttggaacgaatgcctataatggaaaaggtaacaactaatggacccacagatattgcacag
actaatggagaggcagaacccataatagtggatgctaaattagcatcaattacgattcaa
ccttccaaccaggctaatgacttactggatttgcttggaggttctgatgtgacgccagtg
attcagactctcccacccagtaaaccaaactcagttggaggagaacttctggatctgctg
ggagggctggatttatcaggtggcaccttgccattaggtgtccaagctccacaattctca
cagacaccatttctattggataatttagcatctcagccagtcttcaatgatctaagttca
ggcattcctcctgttacagcatacagtaaaggtggtttaaacattgattttaactttgaa
cgttccaatacaaatcctaatgtaactgttgttactataaatgctaccaactcgacagaa
gaggacatgatggactttgtatttcaagctgcagtaccaaagacatttcaactgcagctt
ctttctccgagtaataacgtaattccagcacgaagtgcaggagctgttacacaggtcatt
aaagtgcttaatcctcagaagcaacatcttcgtatgaggatcaaggtgacatataacctc
aacggatcaccggtgcaagatttagcagaagtaaataacttcccccctcaatcgtggcag
tga
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