Leucoraja erinaceus (little skate): 129705861
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Entry
129705861 CDS
T09122
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04136
Autophagy - other
leri04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129705861 (atg13)
04136 Autophagy - other
129705861 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129705861 (atg13)
03029 Mitochondrial biogenesis [BR:
leri03029
]
129705861 (atg13)
Membrane trafficking [BR:
leri04131
]
Autophagy
Autophagosome formation proteins
ULK complex
129705861 (atg13)
Atg1 complex
129705861 (atg13)
Mitochondrial biogenesis [BR:
leri03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
129705861 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
129705861
NCBI-ProteinID:
XP_055505682
LinkDB
All DBs
Position
18:complement(29740758..29812795)
Genome browser
AA seq
531 aa
AA seq
DB search
MDRRDFRFFFTMDGELSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSD
WFNLAIKDIPEVTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMSEKCDK
EIKVSYTVYNRLSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLNGLGEGFQ
TVRVGMVGTPVGTITLSCAYRTNLAFMSSRQLERTQPIMGIIIDHFVDRPYSGSSPLHPC
NYRAPNEEDAGTLPSVDDSQEVCTTSFSTSPPSQLYSSRLSYQPFATLGGGSADFAYSPA
ALTAGVSAAHPHQMVIPGKEGGVPFQPQHPAHGTQADGDRMPTCNPTDMNQQVAATPSSS
GEAEMLSKSSEGKSGSPQDALETTFTRKVGAFVNKPAGQGTAFNMDLPFAVFAPKTVESE
DTDVMVNPPDSPTQESPLHASLHSNQSSGSSGLIQDEFVMVELKPAFSKDDFLPMDLGTF
YREFQNPPQLCSLSIDISAQSMAEDLDSLPEKLAIYEKNMEEFDAFVDTLQ
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggacagacgagatttcagattttttttcaccatggatggcgagctgagtcctcaggat
aaaaaggacctggataaatttattaaattctttgccctgaagacagttcaggtaattgta
caagcacgtcttggagaaaagatttgcacccgttcaagctcttctcccacaggctcagac
tggtttaaccttgcaataaaggatatccctgaagttacccatgaggcaaagaaagcattg
gcggggcaacttccaggaattggacggtcaatgtgtgtggaaatttcgctgaaaacatct
gagggagattctatggagttggaaacatggtgtttggaaatgagtgaaaagtgtgataaa
gaaattaaggtttcctacactgtctacaacagattgtcattgctgttgaaatcactcctt
gcaatcacaagagtgacacctgcatacaaactatccagaaaacaaggacatgactatgta
atcttgtacaggatatattttggagaagtacagctgaatggcctgggtgaaggttttcag
actgtacgggttggaatggttggaactcccgttggcactattaccctgtcttgtgcttac
agaactaacctggctttcatgtctagcaggcagctggagcggacccagccaatcatggga
attatcatagaccactttgtagatcgtccctatagtggatcatcaccactgcacccttgt
aactacagggcaccaaatgaagaggatgcaggaactcttccttctgttgatgattcccag
gaagtgtgcaccacatctttctccacttcccctccctcacagctctacagttcccgtctt
tcctatcagccctttgctactctcggtggtggttcagctgacttcgcctattccccagca
gctttaactgctggtgtatctgctgctcatcctcatcagatggtgattcctggcaaagaa
ggtggtgtaccttttcaacctcaacaccctgcccatggtacccaggctgatggtgacagg
atgccaacctgtaatcccacagatatgaatcaacaggtggcagcaactccttctagcagt
ggagaagcagaaatgttatcaaagagcagtgaagggaagagtggatcaccacaagacgca
ctagaaactaccttcaccaggaaagtgggagcatttgttaacaaaccagccggtcagggc
actgcgttcaacatggatctgccatttgctgtatttgcaccaaaaactgttgaatctgag
gacactgatgtcatggtaaatccccctgattccccaacccaagaatcacccctgcatgca
agtcttcactcaaaccagtccagtggtagcagtggcctcatacaggatgaatttgttatg
gtggaacttaagcctgccttttccaaggatgactttctgcccatggatcttggcaccttt
tacagggaatttcagaaccctcctcagttgtgcagtctctccatagacatcagcgcgcag
tcaatggctgaggatctggattccttacctgagaagctggcaatctatgagaagaatatg
gaggaatttgatgcctttgtagacaccctgcagtaa
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