Leucoraja erinaceus (little skate): 129705900
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Entry
129705900 CDS
T09122
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129705900 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129705900 (nup160)
03036 Chromosome and associated proteins [BR:
leri03036
]
129705900 (nup160)
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129705900 (nup160)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129705900 (nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
129705900
NCBI-ProteinID:
XP_055505776
LinkDB
All DBs
Position
18:34523620..34591409
Genome browser
AA seq
1405 aa
AA seq
DB search
MAPPPLPRGRRGKMATVWERSLLEIGSAERDFPAWRDMRADLGVNAIPGVKYSDSAGGFF
YEESGKLQSVTRNRFIHWTSSGDTLQLIEQSLDTNLLNNAVRLKFLNCHVLPSGVHVHET
HDRVTLLIATNQTVHRIILPHPARMYRSELISEGHIQSIFTDIGKLNLRDPAHSFLIPGS
HSHAVNSTASATWLNSDGEALFALASASGGIMIIQLPEQDTAGSAALLELKQSSVMQRLL
TGWMSTAIRGDQCPSDLPVSLAVQLLEHDTFIFALCQDHKLRLWSYKDQICLMVADMLAF
MPASKELRHTGSLGHKLRLAYSSSGFFLGVYLHCPKRGQFCVFQLVCCIESNRYSLDHIS
TLFSTQETLVDFALTPTDIWAVWQDEDNQTNVRYINFEHNHAGQWNQVFIQPVADEELHV
PEDQDPKETYLEYLFASGRFTPQALLKALQIYCRGADRILDPTMDGLKKEVTLAVENAIQ
NSVTEYEFSQEVYRQLQVEFWSKFYACCLQYQEALARPLALLVNACTNMVCLLKKGFISF
MFPCLTIDHLYMSSDEGLFLEDECSITDDPEVARDLLQLVQCLRLVGDSITMEMASLMET
AVSHLQPPEKAAEQIMEHLLAKDTETHMELQSKLQDIRNPGNIIQLLLREMDLEGDLESS
NDPPLHIRMNMAQFYGSNVAINVVCQAAYHISMTRFLICRDLLILQQLMLHVGDGVSLGA
GGYLLQLQQELIPRTSLLVCTYFVMRWACQSLASAVPVDTLESNLRQLSVLELSDSNALT
SQRAASSLRTVVELFYQQVARKHILSRLLSQDNSPLNHSLINWAQIGIVIANYLLQYLWA
NNTSFLFPEFLMGHCQYVQLQEYVRLLQPWCEVNVGSRRFVLGQCYLATGEGYKALECFR
DGAAAVGREEFLDRLIRVEDEDAVSNPRVHYYNKVLRLLEDMGLPELVLQLTAIAVTEAR
DDGKILAMLWTKIFKHHLDLGHNHQAYESLTQNPDTSRQLDCLRQLVVVLCERYQLQDLV
EFPYINLHDKVVGIIESRARAVDLMTHNYYELLYAFHIQRHNFRKAGTVMFEYGMRLGRE
VRSLQGLQKQVHCYLVGINCLRQIRPEYAWIVRPASGAMYERPGASPKRSHDGEYTAIQV
CRQIDIVELKDLEKEYMLARTRLELVKHDPSSAAVAGNASAEEIVSLLVQVGLFDTAISL
CQTFKLSLTPIFEALAFKCIKLQFNGEATQAAAWDWLKTNQMPSVVATKESSATNEAWRL
LSAYLDRYQSHSSQYHHCIINKLLSHGVPLPNWLVNNYKKMDMAGLLRLYLYYDLLEEAV
DLVVEYIDALMGKGHQYFGIERPLSATAPLVWLPYTAIDQLLLALGENESNINNVQLREN
LEMKLDDYHIRVEQATRDMNNYRRQ
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaccgccgcttcccagagggcggcgcggcaagatggcgacggtgtgggagcgg
agcttgttggagatcggcagcgccgagcgggacttcccggcctggcgggacatgcgcgct
gacctgggtgtgaatgcgatcccaggtgtgaagtactctgatagtgcaggtggatttttc
tatgaagagagtgggaagctgcagtctgtcaccagaaatcggttcatccactggacaagc
tctggtgacaccctgcagctgatagaacagtctttggataccaacctcctcaacaacgcg
gtgcgcctgaagttcctgaactgccatgtgctgccaagtggagttcatgtgcatgagact
catgaccgtgtgactttgctcattgccaccaaccagaccgtgcacaggatcatattaccc
caccccgctcgcatgtaccgcagtgagctgatcagtgaaggacatatccagtccatcttt
actgacattgggaagctgaacctacgtgacccagcccacagttttttgattcctggttcc
catagccatgctgttaactcaaccgcatcagctacctggctgaatagtgatggagaggca
ctgtttgcactggcgtctgcatccggagggattatgataatccagcttcctgagcaagat
actgcaggttctgcggctttactggaattgaagcaaagctctgtcatgcaaaggctactc
acagggtggatgtcaacggctatcagaggtgaccaatgtccttcagatctacctgtcagc
cttgctgtccagctcttggaacatgatacgtttatctttgctctgtgtcaggaccacaaa
ctgcgactctggtcctacaaggatcagatatgcctgatggttgcggacatgctggcgttc
atgccagccagcaaggagctgagacacacaggcagtctgggacacaaactgcgtttggcg
tattcctcttccggcttcttcctcggtgtctatctacactgccctaaacgtggacagttt
tgtgtcttccagttagtgtgctgcattgagagtaaccgctacagtctggatcacatctct
actctcttctccacgcaggaaacacttgtggattttgccttaactcccactgatatttgg
gccgtgtggcaggatgaggataaccagaccaacgttagatacattaactttgagcataac
cacgctggccagtggaaccaggtcttcatacagcctgttgctgatgaagaattacatgtg
ccagaggatcaggaccccaaggaaacctatctggaatatctctttgcctctggccgtttt
acgcctcaggccctgctgaaagctctgcagatttactgccgaggggcagatagaatcctg
gacccgacaatggatgggctgaagaaggaagtaacgctagctgtggaaaatgcgattcaa
aacagtgtgacggagtacgagttctcccaggaggtgtaccgtcaactgcaagtggaattc
tggtctaagttctacgcctgctgcttgcagtaccaagaggccctagctcgcccccttgca
ctgctcgtcaatgcttgcacaaatatggtgtgcctgctgaaaaagggatttatatctttc
atgtttccctgcctcaccatagatcacctctacatgtcttcagatgagggtctctttctt
gaagatgaatgttccatcacagatgatccagaggtagcacgggacctgcttcagttagtg
cagtgccttagactggtgggagactccatcaccatggaaatggcttcgttaatggagacg
gcagtgagccacttgcagcccccagagaaagctgcggagcagatcatggagcaccttttg
gcgaaagacactgagacacacatggaactgcaaagtaaactgcaggatatccgtaaccca
ggcaacataatccagctgttgctgcgggagatggacttggagggcgacctggagtcaagc
aatgacccgcctctgcacatccgaatgaacatggcccagttttatggtagcaatgttgcc
attaatgttgtgtgtcaggccgcgtaccacatatccatgacccgtttcctcatctgtcgt
gacctcctaattctgcagcagctaatgctgcatgttggagacggcgtgagtttgggagct
ggtggatatctcctgcagcttcagcaggagctcattcctcgcacatcactactcgtgtgc
acctactttgtgatgagatgggcttgtcagtctttagcatcagccgtgcctgttgataca
ttggaatcaaacctgcgacaattgtcagtgttagagctgtcagactctaatgccttaact
tcgcaacgtgcagccagcagcctacgtacagtggtagagttgttctaccagcaggtggcc
agaaaacacatcctctcccggctgttgtcccaggataatagtcctttaaatcactcgtta
atcaactgggcgcaaattggcattgtcattgcaaactacctcctccagtatttatgggca
aataataccagctttctgtttccggagtttctcatggggcactgccaatatgtacagctt
caggaatatgtgcgtctgttgcaaccttggtgtgaagtaaatgttggctcacggcgcttt
gtgctagggcagtgttacctggccacaggtgaaggttacaaggctctggagtgcttccgt
gatggtgctgcagccgtggggagggaggagttcctggacagactgatccgggtggaggat
gaggatgctgtctccaatcccagggtgcactattacaacaaggtcctgcgattgctggaa
gacatggggttaccagagcttgttctgcagctaacagcaattgcagtaactgaggcaagg
gatgacgggaagattctggctatgttgtggacaaagattttcaagcatcacttggacctg
ggtcacaatcatcaggcttatgaatcactcacccagaacccggacaccagcagacaactt
gactgcctgcgtcagttggtggtggttctgtgtgagcgttaccaacttcaagatctggtg
gagttcccttacatcaaccttcacgataaggttgttggaatcatcgagtctcgtgctcgg
gctgtggacctcatgactcacaactactacgagttgttgtacgcattccatatccagcgc
cacaacttcaggaaagctgggacagtgatgttcgaatatggaatgcgtcttggccgagag
gtccgctctctccaagggctccagaagcaagtgcactgttatttagtgggaataaactgc
ttgcggcagatccgaccagagtatgcctggattgtgcggccagcgtccggagccatgtac
gagcgtccgggggcctcaccaaagaggagccatgatggagaatacactgccattcaggtc
tgccgtcagattgatatcgtggaattaaaagatttggagaaagagtatatgttggcccgc
actcgactagaactcgtaaagcatgacccatcatctgcggcagtagccggaaatgcctcg
gctgaggagattgtatcattgcttgttcaagtggggctctttgatacagcaatctcccta
tgtcaaactttcaagctctcactcacccccatcttcgaagcactggccttcaagtgcatc
aaactgcagttcaatggagaggccacacaagcggctgcctgggactggctgaaaacaaat
cagatgccatccgtggttgcaacaaaggagtctagtgccacaaatgaagcctggaggttg
ctctctgcctatcttgatcgctaccagtcgcacagttcacaataccatcactgtatcatt
aataaactgttgtcacatggagtgccacttcccaactggcttgttaacaactacaagaaa
atggatatggctggactcctgcgactgtacttgtactacgacctgttggaggaagcggtg
gacctggtggtggaatacattgatgcattaatggggaaggggcaccagtactttggcatc
gagaggccactgtcagccacagcaccactcgtttggcttccttacactgccatcgaccag
ctcctgctggcactcggagagaacgagagcaacattaacaacgtgcagctgcgggaaaat
ctcgagatgaaactggatgactaccatattcgggtggagcaggcaacgcgcgacatgaac
aactaccgcaggcagtag
DBGET
integrated database retrieval system
