Leucoraja erinaceus (little skate): 129705912
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Entry
129705912 CDS
T09122
Name
(RefSeq) ATP-dependent translocase ABCB1-like
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129705912
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
leri02000
]
129705912
Transporters [BR:
leri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
129705912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_16
AAA_30
AAA_21
AAA_5
Rad17
AAA_29
AAA_15
AAA_28
G-alpha
nSTAND1
NB-ARC
NACHT
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
129705912
NCBI-ProteinID:
XP_055505812
LinkDB
All DBs
Position
2:complement(94364954..94416016)
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AA seq
918 aa
AA seq
DB search
MIGSLSIGQGLTNLEGVSKARSAAYEVYGLIAKHRSIDSSSNDGHKPDSIRGDIEFKDIH
FSYPTRPDSKILNGLNVKITSGQTMALVGASGCGKSTTVQLLQRFYDPEAGEITLDGHDI
RTLNVKWLREHIGIVSQEPILFATTIAENIRHGREDATDEDIEQAAKEANAYDFISMLPD
KFNTIVGERGTQMSGGQKQRIAIARAIISNPKILLLDEATSALDTQSESIVQVALDKVSG
ITEQGIHSELMDKKGIYYSLVMQQSSNKMGDCAEERGNALENVNELENDEVKSMQIMSRS
SFRRTSSKKLQKIASSESKETENNDEANNSEKDLAEVSFLQILALNKTEWPYVVIGILSA
IVGGGVPVAFGAVLSRIIGVFAITDPEQKQQRASIFSLIFLGLGTLILLCHCIQGYMFGK
SGEILTMRLCALSFKAMLQQEIGWFDDQKNNVGVLLTRLATDASQVKGATGLQIGSIAMN
ICTLGTAVIVAFVFGWQLTLVILCCIPFLITADFIAMRTISGQSLKNDKYLVESGQISIE
AVENIRTIVSLTIEDAFFKRYMDCIDEPSRTTYRKAPLFGLGYGIAQSIPYFVNAAIFRF
GAWLVVNCFMVFEDVFLVFAVIVLSALYLGQTATFVPNYAKAKDSTQRIIKLLERKPLID
SYSEEGEKLTNFEGNIEFQNVKFAYPARPDAEVLQGLNIKVNKGQTLALVGNSGCGKSTL
VQLLERFYDVMGGQVLVDGKDTRSVNLPWLRQQLGIVSQEPLLFDCSIAENIEYGDNSRA
VSQEEIEKAATAANIHSFIESLPEGHNTKVGDKGTQLSGGQKQRIAIARALIREPTVLIL
DEATSALDNESEKIVQKALDEARQGRTCLIIAHRLSTIQNADIVVVIQKGRVAEIGTHDQ
LLAKEGAYYALIHAQVQN
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgataggatctttgtccattggtcagggactaacaaacctagagggtgtttcaaaggct
cgaagtgctgcctatgaagtatatggtctcattgcaaagcatcgttctatagatagcagc
tccaatgatggccataaacctgatagtatcagaggagacattgaattcaaggatattcat
ttcagctatccaaccagaccagacagtaaaattcttaatggtttgaatgtgaagattaca
agtggtcagaccatggcactagttggggcgagtggctgtggtaaaagcacaacagttcag
ctgctccagcgtttctatgacccagaagcaggagagataactctcgatgggcatgacatc
cgtacattgaatgtgaagtggttgagagaacacattggcattgtgagccaggaaccaatt
ctgtttgctacaactattgctgaaaacatacggcatggtcgagaggacgcaactgatgaa
gatattgagcaagcggcaaaggaagcaaatgcttatgattttatatcaatgctacctgat
aaatttaacacaattgttggtgaaagaggtacccagatgagtggtggacagaagcagaga
attgctattgcacgtgcaataatcagcaacccaaaaattcttctgctggatgaagcgaca
tctgctctcgatactcagagtgaatcaatagtgcaggtagctctggataaggtaagtggg
attactgaacaaggtattcacagtgaactcatggacaagaagggcatttattattccctt
gtaatgcagcagagttcaaataagatgggtgattgtgctgaagaaagaggcaatgctttg
gagaatgtgaatgaactggagaacgatgaagtcaaaagcatgcagataatgagcaggagc
agtttcagaagaacatcaagcaagaaacttcaaaaaattgcttcctctgaatcaaaagaa
acagagaacaatgacgaagcaaacaattcggaaaaagatttagcagaagtttcatttcta
caaatccttgctctgaacaaaaccgagtggccatatgttgtaattggaatcctctcagcc
attgtaggtggtggtgtaccagtagcatttggtgcggtgctttcacggattattggggta
tttgcaatcactgaccctgaacaaaaacagcagagggcttctatattttccttgattttc
ctaggtctgggaactctcatattgttgtgtcactgtatacagggttacatgtttggaaaa
tctggggaaatccttacaatgaggctgtgtgcattatcatttaaagcaatgttacaacag
gagattggttggtttgatgatcaaaagaataatgttggtgtgctactaactcgtttggct
acagatgcttcacaggttaaaggggccacgggattacaaatcggtagcattgcaatgaat
atctgcaccttaggaactgctgtaatcgtcgcattcgtgtttggatggcagctgacctta
gttattctgtgttgtatcccatttcttattactgcagattttattgcgatgcgaacaatt
tcagggcaatcattaaagaatgataaatatcttgtagaatctggacagatctcaatagaa
gccgtggaaaacataagaacaattgtatcattaacaatagaagatgcttttttcaaaaga
tacatggactgcatagatgaacccagcagaaccacatataggaaagctcctctctttggc
ttaggctatggtatagcacaatctattccttacttcgttaatgctgcaatcttccgattt
ggagcatggctcgttgtgaattgcttcatggtttttgaagatgtgttcttggtttttgca
gtcattgtattgagtgctctgtatcttggacaaacagcaacatttgttccaaactatgcc
aaagctaaagattctacacaaagaataatcaaacttcttgaaaggaagccattaattgat
agctacagtgaagagggagaaaagctgaccaactttgaaggcaatattgagtttcaaaat
gtcaaatttgcttatccagcgcgaccagatgcagaggttctccaaggtctaaacataaaa
gttaacaaaggacagaccttggcactggttggaaacagtggatgtggaaagagcactttg
gttcagttacttgaacgattttatgatgtgatgggtggacaagtgttggtggatgggaaa
gatacaagaagtgtcaatttgccatggttgagacaacagttgggaattgtatcccaggag
cccttgctctttgattgcagtattgctgaaaatattgaatatggtgacaacagcagagct
gtatctcaagaagaaattgaaaaagctgcaacagcagccaatattcacagtttcatagaa
agtctacctgaaggacacaacacaaaagtaggagataaaggaacacagctctctggtggt
cagaaacagagaatagctattgcccgagctcttatacgggaaccaacggttctaatcctt
gatgaagctacatctgccctggacaatgaaagtgaaaagattgtccagaaagccttggat
gaagctaggcagggccgaacttgtttaattattgcccaccgattgtcgacaatccaaaat
gctgatattgtagttgttatacagaaaggaagagtggcggaaataggaactcacgaccag
ctcctggcaaaagaaggagcttactatgcacttatccatgcacaggttcaaaattaa
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