Leucoraja erinacea (little skate): 129706099
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Entry
129706099 CDS
T09122
Symbol
prdm4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129706099 (prdm4)
Transcription factors [BR:
leri03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
129706099 (prdm4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf_PR_Knuckle
zf-Di19
zf-C2H2_jaz
zf-met
SET
HypA
PyrI_C
zf-C2H2_6
DUF5810
ZNF512_C2H2
Motif
Other DBs
NCBI-GeneID:
129706099
NCBI-ProteinID:
XP_055506056
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Position
19:3631341..3657262
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AA seq
771 aa
AA seq
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MNDINLSQVGMEQLSASSVSTTLPVTATHLGMSSPTHNPLSAPGMPVAIPNLSPTLGTLP
SALSLMLPMSIGERGVMCSIPDRNYTLPPPPYPHLDNSYFRHILPGILSYLADRPPPQYI
HPTAISVDGTPALPVSSNPPALDHYEPGSGVSLETSIVSIDSRQVGSHGSQSLHQPSNGE
VPLDASISMETVSRVNSPIPTEGMSDEMAMSGVRAESRTLPPGSRGHESMSVDSVRNNLE
AEGPMPIHGSPLELPVVMEPEAMAGRVGSMSERALRDPIHAAALNPNPGAVALPPPHSLP
SLHGPSLGLDSVSVSTITADVSMTSNQVNVSAETLTFVAPALQMDDSGSNKENLADSFTI
WCTLCDRAYPEDCPEHGAVTFIPDTPVNSRARLSIPRQLCLRQSITGGDVGVWSQDAIPV
RTCFGPLVGQQINLMEITDWTSKTSTNIWKIFRNYVLEFQIVTVDEDICNWMMFVHRART
REEQNLVAYPHNGKIYFCTSREVPPDHELLYYYTRDYARQLGVPEQPDVRMCHCGKAYST
YGELKLHLNSHGQNRERKWKCSICPRAFTSSTKLNVHMMGHMGMKPHKCEFCSKAFSDPS
NLRTHLKIHTGQKNYRCEMCDKSFTQKAHLASHMIIHTGEKNLKCDYCDKKFMRRQDLRQ
HVVTHTQERQIKCPNCDKLFWRTTHLKKHLNSHEGRRDFICEKCSKAFLTKYHLTRHLKI
CKASKTCMPTQDQEEEEDEDEEGDSDEELLEVGSGTCRLTNDHYITEDSSQ
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacatcaacctgagtcaggtgggcatggagcagctgagtgcttcgtccgtcagt
actaccttacctgtgacagcaactcacctgggcatgagctcacccactcacaaccctctc
tcagctccaggaatgcccgtagcgatcccgaacctgagccctaccttgggcactctcccc
tccgccctctcgttgatgcttccgatgagcatcggggaacgtggcgtcatgtgcagcatt
cctgaccgcaactacacgctgccccctcctccttacccacacctggacaacagctacttc
cggcacattttgccaggcattctgtcttacctggctgacagaccacctcctcagtacatc
caccccacggccatcagtgtggacggcactcctgcactgcctgtctccagcaacccgcct
gccctggatcactatgagcccggcagcggcgtcagcttggagaccagcatcgtctcgata
gactcaagacaggtcggcagtcacggctcccagagtctgcaccagcccagcaacggggag
gtgccgctggatgccagcatctccatggaaacggtttccagggtgaacagccccatcccg
acggaagggatgagcgacgagatggcgatgagcggggtgagggcagagtcccggacgctg
ccccctgggtccagaggccacgaatccatgagcgtggactcggtgcggaacaacttggaa
gcggagggaccgatgccgattcacggcagccctctggagctgccggttgtgatggaacca
gaggccatggccggtcgggtgggcagcatgtcggagagggcactgcgtgaccccatccac
gccgctgcactcaaccctaaccctggggcagtggcactccctcctccccactccctgcct
tctctccacggaccgagcctgggtctggactctgtctccgtctccaccatcaccgcagac
gtctccatgacctccaaccaggtcaatgtgtcggcggaaaccctgacctttgtggcgccg
gctctgcagatggacgactccggctccaataaggaaaacctggcagactctttcacaatc
tggtgcactctatgtgaccgggcctaccccgaggactgccctgaacatggggcagtgact
ttcattccagacaccccagtcaacagccgagccaggctctcgattccaaggcaactgtgt
ctccgccagtccatcacagggggcgatgtcggcgtgtggagtcaagatgccattcctgta
cgaacctgcttcggacctctggttggccagcagattaacctgatggaaatcaccgactgg
acgagcaaaaccagtacaaacatctggaaaatatttcgtaattacgttctggagtttcaa
atagtgacagtggatgaggacatctgtaactggatgatgtttgttcacagagccaggact
cgcgaggagcagaacctagtggcctatcctcacaacgggaagatttacttctgtacgtcc
agggaggttcctcctgaccacgagctgctctattactacaccagggattatgcacggcaa
ctcggggttccggagcagccggacgtgcgcatgtgccactgcgggaaagcctacagcacg
tacggggagctgaagttgcacctgaacagccacgggcagaaccgggagaggaagtggaag
tgctccatctgcccccgagccttcacctcctccaccaaactcaatgtccacatgatgggc
cacatgggcatgaagcctcacaagtgcgagttctgcagcaaggccttcagtgaccccagc
aacctgcgcactcacctcaagatccacacaggtcagaaaaactaccgctgtgaaatgtgt
gacaaatcgttcacgcagaaggctcacctggcttcacacatgatcatccacacgggcgag
aagaacctgaagtgtgattattgcgacaagaagttcatgcggcgacaggatctccggcag
cacgtggtgacacacacacaagagcgacagatcaagtgtccaaattgtgacaagctcttc
tggaggacaacccacctgaagaaacatttgaattctcatgaaggacggagggatttcatt
tgcgaaaagtgctcgaaggcattcttgacaaagtaccatttgacccgtcacctgaagatc
tgcaaagcctccaagacgtgcatgcccacacaagatcaggaggaggaggaggatgaggat
gaggaaggggacagtgatgaggagttgttggaggttggcagtgggacatgtcgtttaacc
aatgaccattacatcacagaagacagttctcagtag
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