Leucoraja erinaceus (little skate): 129706142
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Entry
129706142 CDS
T09122
Name
(RefSeq) structural maintenance of chromosomes protein 1B-like isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04110
Cell cycle
leri04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129706142
04114 Oocyte meiosis
129706142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
leri03036
]
129706142
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
129706142
Meiosis-specific proteins
Cohesin complex and associated proteins
129706142
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
Motif
Other DBs
NCBI-GeneID:
129706142
NCBI-ProteinID:
XP_055506132
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Position
19:complement(5754223..5933908)
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AA seq
1232 aa
AA seq
DB search
MATLKLIVIENFKSWRGRQLIGPFMRFNCIIGPNGSGKSNIMDAISFVMGERTANLRVKH
MKDLIHGAHVGHPVSPTARVTMLYTIEDDEDVSFTRAIIGNSSEFRLNDRAISRAEYANE
LEKIGILLKGRNCLVFQGAVESIAMKKPKERTQLFEQVSNSGELSSEYDMKKKEMLDAEE
EARFNYNKKKNAAVERKHAKYEKEEADRYQVLIEELKESKIQLHLFLLYYNEMFIENLCN
DLQAKNEAINSQKIRQAMVEEEAKTVKKEMGKLNREVQQIEKEIKAHESNLNEKRPSYIK
AKENTRHHAKKVEMAKKSMKNCEKQHSIHQQEVKEMESELEDVKKLWTEYEEKAQAELSS
RGHSMELEESQAEEYKELKELVRKKLFAMTHGLEKLRLEQKSDRDKLELEERNHKYLEVR
IRHTELEIDDYVKRSEKLEDYINICKASLAEQKKREEDLTNEIQNAKLRISEVSEKLNEV
AGELQNAGIAHHEGHRQQRKAEILESFKRLYPDSVYGKLVDLCHPIHKKYQLAVTKVFGR
YVNAIVVATEKTARDCIRYLKEERAEPETFLALDYLEIKPINEQLREIKGAKMMIDVIQC
VSPQLKKVVQFVCGNGLVCENLKEARMIAFDGPERLKAVALDGTLFLKSGVISGGSSDLK
FKARCWDEKGISQLREMKDKLKNELRDLLKVNRKEAELRHLQAQAKGTETRMRYSLSDLE
QTKKKHLTNRHMEKSKLESTLANLKSNLAVFRSNLEGHEMKMQEMQFQMNEVEDRVFEDF
CVKIGVANIREYEDEHVKQLEEIAQKRSEFENQKTRLAIQLDYLYDQIKEDIKKIHKWKE
AIEKDEKEIVKLKKEELQLMKIVDEIMTIQQNLTNKLLIKKSQAQDMQKEVDEARKKVSN
ADRELAKLQKEYVSVETSIEQKRLERHNLLLACKVQDIQIELLQGKLEEISEVGTEVEST
QATVDVFELEAGFEIDYSSLPTDLKGLTSFKETEIEENRLNKLLEEKEKFLHRTTAPNMR
AVEKLQNVWDKFQDSVHAFELSRKKARICRQEFEHVKKRRYDLFNHCFEHVSVKIDQIYK
MMCQNSSAQAFLSPENSEEPYLDGIGYNCVAPGKRFMPMDNLSGGEKSVAALALLFAIHS
YRPAPFFVLDEVDAALDNTNIGKVTSYIREQSKNNFQVIVISLKEEFYSKADALIGVYPE
QGECMSSQLLTFDLTLYPENTKMEERQQLEED
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccttgaagttgatcgtgatagaaaacttcaagtcgtggagaggccgacagttg
atcgggcccttcatgcgattcaactgcatcatcggcccgaatggatcggggaaatcaaat
ataatggatgccatcagttttgtgatgggcgagagaactgctaatctcagagtgaagcac
atgaaagacttgatacatggtgctcatgtaggacatcctgtgtcacctactgcaagggtc
actatgctgtacacaatagaagatgatgaggatgtctcatttaccagagccattattggg
aattcttcagaatttcgattaaatgatagagctatcagtcgagcagaatacgcaaatgaa
cttgaaaaaattggcattctactgaagggtagaaactgcctggtgtttcagggagctgta
gagagtattgctatgaagaaacccaaagagagaacacaattgtttgaacaagtcagcaat
tcgggggaattgtccagtgaatatgatatgaagaagaaagaaatgctagatgcagaagaa
gaggctcgattcaattacaataaaaagaaaaatgcagcagttgagcgcaaacatgctaag
tatgagaaagaagaggcagatcgttaccaagtattgattgaagaattgaaagaaagcaag
attcagttgcatctcttccttttgtattataacgagatgtttatagaaaatttatgcaat
gatctgcaagcaaaaaatgaagctataaatagtcagaaaatcaggcaggccatggtagaa
gaagaagcgaaaactgtgaagaaagagatgggtaaactgaaccgagaggtgcagcaaata
gagaaggagataaaagcccatgaatctaatctgaatgagaagcggcccagctatataaaa
gctaaggagaacacaaggcaccacgcgaagaaggtagagatggctaaaaaatctatgaaa
aactgtgaaaaacagcacagcatccaccagcaggaggtgaaggaaatggaatcagaactt
gaagatgtgaaaaaactatggacagaatatgaggaaaaggcgcaagcagaactaagcagc
agaggtcacagcatggaactggaagagagccaagcagaagaatataaagaactaaaggaa
ctagtgagaaaaaaattgtttgccatgacccatgggctggagaagttacgattggaacag
aagtctgatcgagacaagttggaactggaagaaagaaaccataaatatttggaagttcga
attagacacacagagctggaaatagacgattatgtgaaaagatcagaaaagctggaagac
tatattaatatctgcaaagcttctctggctgagcagaaaaaacgggaagaagacttaact
aatgaaatacagaatgcaaagctacgtattagtgaagtcagtgaaaaactaaatgaggta
gctggtgagctacagaatgctgggattgctcaccatgaaggacatcgccagcagaggaaa
gctgagatacttgagagttttaaacgtttgtatccagattctgtgtatggaaagcttgtg
gatctttgtcatcctatccacaagaagtaccagcttgctgtcaccaaagtttttggaaga
tacgttaatgccattgtggttgctactgagaaaacagccagggattgtattcggtatttg
aaagaagaacgagctgagccagagactttcttagctctagattaccttgaaataaaacca
atcaatgaacagttgcgagaaattaaaggagccaaaatgatgattgatgtgattcagtgt
gtatcaccacagttgaagaaagtggtacagtttgtttgtggcaatggactagtatgtgaa
aacctgaaagaagccagaatgattgcatttgatggaccagaaagacttaaggcagtggca
ttggatggaacactcttcctaaagtctggtgttatctctgggggctccagtgatctaaag
tttaaagccaggtgctgggatgagaaagggatcagccagctgagagaaatgaaggataag
ctaaaaaatgagcttcgggacctgctaaaagtaaacaggaaagaagccgaattaaggcac
ttgcaggctcaagccaagggtacagagaccaggatgagatattccttgagtgatctggag
caaactaagaagaagcatttgactaatcgtcatatggaaaagtcaaaactagaaagtaca
ttggctaatttgaagtccaatttggcagtttttagatcaaatcttgaaggccacgagatg
aaaatgcaggaaatgcagttccaaatgaatgaagttgaagatagagtgtttgaagatttc
tgcgtcaagataggtgtagcaaatatccgtgaatatgaggacgaacatgtgaagcaatta
gaagaaattgctcagaaaaggtctgagtttgagaaccaaaaaacacggttagcaattcag
ctagactacttgtatgatcagattaaggaggatatcaaaaaaattcataaatggaaggaa
gctattgaaaaagacgaaaaagaaatagtgaaattaaagaaggaggagttgcagttaatg
aaaattgtagatgaaatcatgacgatacagcagaatctcactaacaagcttttaattaaa
aagtcacaagcccaggatatgcaaaaggaagttgatgaagccaggaagaaagtatcaaat
gctgacagagaactagcaaagcttcagaaagaatatgtttctgtggaaacctctatagaa
caaaaaaggttggagcgacacaatcttctattagcctgtaaagtacaagatatacagatt
gaactactccaaggcaaactggaagaaattagtgaggttggaacagaagttgaaagcaca
caagctacagtggatgtctttgaattggaagctggttttgaaatagactatagcagttta
ccaacagatctgaaaggccttacatcgtttaaagaaactgaaatagaggaaaatagatta
aataagctattggaagagaaggaaaaatttttacacagaacaactgcaccaaatatgaga
gcagttgaaaagctgcaaaatgtgtgggataagtttcaagattcagtccacgcatttgaa
ttaagtagaaagaaagctaggatctgcagacaggagtttgaacatgtcaaaaagaggaga
tacgatttgtttaaccactgttttgagcatgtctcagtgaaaattgatcagatctacaag
atgatgtgtcagaatagcagtgctcaggcattcctcagtccagaaaattctgaagagcct
tatttggatggtatcggttacaactgtgtggccccagggaaacgattcatgcctatggat
aacttatcaggaggagaaaagtctgtggcagcattggcattgctttttgctattcacagt
taccggccagcccccttttttgtacttgatgaagttgacgctgctttggacaacacaaac
atcggaaaagttacaagttacatccgagaacaatccaaaaataattttcaggtgattgtg
atctcgctaaaagaagaattttattcaaaagctgatgcactaattggagtatatccagag
caaggcgaatgtatgtccagtcaacttctgacctttgaccttaccctttaccctgaaaat
accaaaatggaagagaggcaacagcttgaggaagactaa
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