Leucoraja erinaceus (little skate): 129706210
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Entry
129706210 CDS
T09122
Symbol
pus7l
Name
(RefSeq) pseudouridylate synthase PUS7L isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
leri03016
]
129706210 (pus7l)
Enzymes [BR:
leri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
129706210 (pus7l)
Transfer RNA biogenesis [BR:
leri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
129706210 (pus7l)
Prokaryotic type
129706210 (pus7l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
R3H
Motif
Other DBs
NCBI-GeneID:
129706210
NCBI-ProteinID:
XP_055506248
LinkDB
All DBs
Position
19:10867076..10893032
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AA seq
707 aa
AA seq
DB search
MYDMETVWCWVSDHVGFRGTIKNSPSDFVVTEIDMCGRLVNDVDCVRDTCTIDSSQLQPQ
PQPQPRPTPSKRPKKRERSPANDSERAGVGESTVIPSDASLNTDPELSESSINSPSVEVQ
GRSLEMLLGCSIAESLEQFASSAKGGSLAMEGKEEATLLLVTFQEKGQRASVHKAVRQRY
PFLKTVTSSAEIRVRLDPQYSELRQLVSEGEADGLFRFLDSRDTSSKFSFQPDGNKEHRK
AVHHFVSRYFGKLLETKSFSGQGDGSRPDAVITVRFRDKINGSRKRAAHEYQGPSTPYTA
FTLHKVNMETLDAVASLASQLGVLPSDFSYAGIKDKKADTSQTMVVKNVTIDKLKAKQSS
IQNKDLKIYNLRTTTQHLRVGQLKGNHFSIIVRNVSKHLKDDPEASLAERVFGAIENVKE
RGFVNYYGPQRFGLGLNVQADQIGLALLKQNLVKALHLFFTPEEGNDPVNKAKRHFINTE
DAKATLALMPEYKTRERLVLRALNRYGNSQEGCTRAWLSLPHYMRILYVHSYCSKIWNEA
ATFRLKTYDMHVVEGDLVTCDKPEQDLLSRNNQVHVVTAKDVESGNYSINQVVLPMPGNS
IQYPSNKLTSWYQEALVRDGLQGCRFRIPALQLNVPGCYRPLLALPRRLECRWWESEEVL
CTKEEADFAVGEPDLPLKTGDALSLLFSLNPSNYATVCLREIMKCHV
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacatggagaccgtctggtgctgggtcagtgatcacgttggtttccgtgggacg
atcaagaactcgcccagcgattttgtggtgacggagatcgacatgtgtggaaggctggtg
aacgacgttgattgtgtgcgggatacttgcaccattgacagcagccaactccaaccccag
ccccagccccagccccggccgaccccaagcaaaaggccaaagaaacgggaaagatcgcca
gcgaatgattctgaacgggctggcgtgggtgaatcaactgttatacccagcgatgccagc
ctcaacactgatcctgagctgtctgagtcttccatcaattccccttcagttgaagtgcag
ggacgtagcttagagatgcttctgggatgctcgatagccgagtcactggaacagtttgca
agctcagcgaaagggggaagtctggccatggaggggaaggaggaggccacacttttactt
gtgactttccaagagaaaggccagagggcatccgtccacaaggccgttcggcagagatat
cccttcctgaagaccgtcaccagcagcgctgaaatacgagtcaggcttgaccctcagtac
tccgagctccgtcagctggtgtccgagggagaagccgacgggctgttccgcttcttggat
tcgagggacaccagttccaagttttcctttcagcccgatggaaacaaggaacaccggaag
gccgtccatcattttgtcagcaggtattttgggaagctgctggaaaccaaaagcttttcc
gggcaaggggacgggagccggccggacgcggtgattaccgtgaggtttcgagacaagatt
aacggcagcaggaaacgagctgcccatgaataccagggaccatcaacaccgtatacagca
ttcaccctgcacaaggtgaacatggagaccctggatgcagtcgctagcctggcctctcaa
cttggcgtgctgccgtccgacttcagctacgcaggcatcaaagacaagaaggccgacact
tcccagaccatggtcgtgaagaacgtgacgatcgacaagttaaaagcaaagcagtcatcc
atccaaaacaaggatttgaagatctataatctgcgaactacaactcagcacttgcgagta
ggacaactaaagggaaaccattttagtatcatcgtaagaaatgtcagcaagcatctgaaa
gatgatcctgaagcaagtcttgctgaaagggtgtttggtgccattgagaatgtcaaggag
agaggttttgtaaactactatgggcctcagcggtttggcctaggactgaatgttcaagct
gatcaaattggtttggctcttctcaagcagaatttggtgaaagctctgcatttattcttt
actccagaagaaggaaatgatcctgttaataaggccaaaagacattttattaatacagag
gatgccaaagcaactcttgccctgatgccagagtacaaaaccagggagcgactggtgctc
cgcgcattaaatcgctatggcaacagccaggaaggctgcacacgggcttggctcagttta
ccacactacatgcgcattctgtacgtgcactcgtactgcagtaagatctggaacgaagcc
gcaaccttccgcttgaaaacctatgatatgcatgttgtggagggagacttggtcacctgt
gataaacctgagcaagaccttttatctcgaaacaatcaggtgcatgttgtgacagccaaa
gatgtggaatcaggaaattactccattaaccaggttgttcttccaatgcccggtaacagc
atccagtatcccagcaacaagctaacttcatggtaccaagaagctttggtgagagatgga
ctacagggttgcaggtttagaatccctgcactgcaactgaatgtcccaggatgttatcgg
cctctcctggcactacctcggcggctcgagtgtcggtggtgggaaagtgaagaggtgctt
tgtacaaaggaagaggctgactttgctgttggtgaacccgacctgccgctgaaaacggga
gacgcactttctttgttattcagcctaaacccatcaaactatgcaacggtgtgtctcagg
gaaataatgaaatgccacgtatag
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