KEGG   Leucoraja erinaceus (little skate): 129706284
Entry
129706284         CDS       T09122                                 
Symbol
pwp1
Name
(RefSeq) periodic tryptophan protein 1 homolog
  KO
K14791  periodic tryptophan protein 1
Organism
leri  Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:leri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:leri03009]
    129706284 (pwp1)
Ribosome biogenesis [BR:leri03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    129706284 (pwp1)
  Pre-60S particles
   Other pre-60S particles
    129706284 (pwp1)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_WDR5 WD40 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_RFWD3 EIF3I Beta-prop_WDR41 WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st ANAPC4_WD40 WD_LRWD1 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_ACSF4 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_HPS5 PEP5_VPS11_N Rsc14 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 129706284
NCBI-ProteinID: XP_055506449
LinkDB
Position
19:complement(18037812..18061539)
AA seq 508 aa
MLLAAGRSFPAAAMSGFHTCARWTPRGAAQETPHKVTLTKQELQQLILNAKEELKDREQE
NEEAAEGTQELGEGSGLPASDADTPEGREEKKEQEEGDRDSLAEYDLDEYDEEEGGVNFG
DSLGGLTVYASNEDDPYVTLKDTDQYEDEDFKIKPSDNLIVTGKVEKDCSILEIFVYNQD
EQSLYVHHDLLLPAYPLCVEWLNFDPDPGRPVGNHAAVGNMTPVIDVWNLDVVDSLEPVF
SLGSETSKKKKRKGTESGHEGHSDAVLDLSWNRNIRTVLASASADDTVILWDMSERKAVT
CLTGHTDKVQTLHWHPFEAQTLLSGSFDKSVVLYDCRDPKESRRSWKFSGEVERVVWNHF
SPNNFLASTDDGFVYCLDARTEKPLFTLKAHNGEVTGLELSSQIKGCLVTSSSDKHVKIW
DILGNKPSLIHSRDMKMGVVFCAACCPDAPFTYTFGGQKGGLRTWDVSSISAVNAAFGSR
ERLQMTAPWSSPAAMAASCNVTDFAMES
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgttgttggcggcgggccggtcatttccggcggcggcgatgagcgggttccacacgtgc
gcccggtggacgccccgcggggcggctcaggagaccccgcacaaggtcaccctgactaaa
caggagctgcaacagttaatcctcaatgccaaggaagagttgaaggaccgggagcaggaa
aatgaagaggctgcagaggggacacaggagctgggggaaggatcaggccttcctgcctct
gatgctgacactccagaaggtagagaggagaagaaggagcaggaggagggggatcgggac
agtctggcagagtatgacctggatgagtacgacgaggaggaaggtggtgtgaactttggc
gatagtctgggcgggctcactgtctatgccagcaacgaagacgacccctacgtcactctt
aaagatacagaccagtacgaagatgaagattttaaaatcaaaccgagcgacaatctgata
gtgacggggaaggtggagaaggattgcagcatcctcgagatattcgtgtacaaccaggat
gagcagagcctgtacgtgcaccatgacctgctgcttccagcctaccccctgtgtgtggaa
tggctcaactttgatccagacccaggaaggccagtgggcaatcatgctgcggtgggcaac
atgactcctgtgatcgatgtgtggaacctggatgtggtcgacagtctggagcccgtcttc
agcctgggcagtgagacgtccaagaagaaaaagcggaaggggacagagtcggggcatgaa
ggacattctgatgcggtgctggacctttcctggaacagaaacatcaggactgttctagcc
agcgcgtctgccgatgacactgtgattctctgggatatgtctgaaaggaaagccgtgacc
tgcctcactggccacacagacaaggtgcagactctccactggcatccgtttgaagcacag
acacttctctctggctcgttcgacaagtctgtggttctgtacgactgtcgcgatccgaag
gagagccgtcgcagctggaagttcagcggagaagtcgagcgagtggtttggaatcacttc
tcgcccaataacttcttggccagcacggatgatggctttgtctactgtctggatgctcga
acagagaaaccacttttcacactcaaagctcacaatggtgaagtaacaggtctggagctc
agcagccaaatcaaaggctgcttggtgacgtcgtcttctgataaacatgtgaagatctgg
gatattttggggaataagccaagtttgatacattccagagatatgaaaatgggcgttgtg
ttctgtgcagcttgttgtccagacgcgccgttcacatacactttcggaggacagaaagga
ggtcttcgcacctgggatgtcagcagtatctcagcagtgaacgctgcctttgggtctcgt
gagcgattacagatgactgcaccttggagttcacccgctgctatggctgcgtcatgcaat
gtcacagactttgccatggagtcctag

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