Leucoraja erinaceus (little skate): 129706315
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Entry
129706315 CDS
T09122
Symbol
mybpc1
Name
(RefSeq) myosin-binding protein C, slow-type isoform X1
KO
K12557
myosin-binding protein C, slow-type
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129706315 (mybpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
leri04812
]
129706315 (mybpc1)
Cytoskeleton proteins [BR:
leri04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129706315 (mybpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
THB
Ig_DSCAM-DSCAML_C
C2-set_2
V-set
DUF3016
DP-EP
Motif
Other DBs
NCBI-GeneID:
129706315
NCBI-ProteinID:
XP_055506498
LinkDB
All DBs
Position
19:19132530..19220903
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AA seq
1313 aa
AA seq
DB search
MPEPLKKPVSAFTKKPKALEVTAGSLAEFVAEVGKADAKVKWQKDGKDIQASDKHTITSE
GVQHKLVVNNVTKDDEVGYAVISGTSKVKFELKIKAEDGKGSPEVPATPTPAAPAAPAAP
AAPAAPAAPAAPAAPAEQKENVAASSPENAPVTETEEDQSKTTPPSPGGAEGPPSPQLPN
DTQDEKPSDSSRKNSVWSLGEGPTEEGEKLDDSKRSTLFTEQPHSGTVTVGGDITFVAKV
ETKDLLRKPNAKWFKGKWLDLASKAGKHLQLKESFDRITRTHTFEMQIIKAKENYAGNYR
CEVSWKDKFDSCSFDLEVIEAPEVQQIDIRAAFKRRAAPVSGTDGQEDAGELDFSGLLKH
REVKDENTEPDVDVWELLKGAQPHEYEKIAFEHGITDLRGLLRRLKKIKREEKKSAAFAK
VLEPGYQVERGDKIRLVVDLADPTVDLKWYRNGQEIRPGPKYIFEHKGTLRMLTIKNCTK
ADDAAYQVSAGEEKSTTELFVKEPPILITRGLEDTNGLVGERVELECEVSEENAHLKWYK
NGVELGVSSKYRIRTEGTKHWLIIPEAAKADAGTYSVKTAGGQSTAALKVEMRPLKILQG
LTDQVAKVGQQAVLQCEMSLANLPGKWYKNGQVIYPTDHLKISQRGRIHKLVVEKAALDD
DGDYTFVPEGYTMHLGAKLRMIDPPKLYLESLTKSPEIVVVAGNKLRLDIPITGEPMPRI
IWMKGDKAILESGNRVRAESFPDHTSMVIDIAEKDDTGVYKIVVQNEAGEDSATLKIKVV
DVPDPPPAPIVTEVGGDWCSMMWNPPDYDGNSPILGYIIERKKKQSSRWMRLNFDLCKEM
TFEPKNMIEGIPYEVQVIAVNAIGMSRPSDPSKAFVPLAPTSEPTLLACDGVTDTSVSLK
WRPPERIGAAGLDGYLIEYCLEGKDEWIVANTELTDLTKYTINGLPTGEKIHVRVKAVNA
AGESPPISMAQSILVKEVVEPPKIRLPRQLKQTYIRKVGESLNLMIPFQGKPRPKVSWTK
DGGPLDLSTISIRNTETDTVIFVRKTERYHSGNYELAVQVEKIEDKATIVIQVVEKPGAP
FTVHIVEVWDTNVELAWTPPKDNGNAAITGYTIQKADKKTMDWYTVVDHYHRTNCFIPDL
IVGNEYYFRVFAENMCGLSDEATRTKNSALIKKQGLSLKSPEYNDFDFNETPKFTHPLIN
TIAVSGYNATLNCSVRGFPKPIITWMKNRMVIENNPRYRMFANQGVCTLEIRKPSPYDGG
LYTCKAINPLGEDEVECKMEVKGGFQFHELMLQGMPLGIIRLYVGSESVLTPP
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgccggagccgctgaaaaagccagtgtccgcgtttaccaagaaaccaaaggccctcgag
gtgacggccgggagcctggcggagtttgtggctgaagtcggcaaggcagatgcgaaagtc
aaatggcaaaaagacggcaaagatatccaagccagcgacaagcacacgatcacatcggag
ggagtgcaacacaagctggtagtgaacaacgtgacgaaggatgatgaggtgggatacgcc
gtcatcagtggaacctccaaagtcaaatttgaactcaagatcaaagcggaagatggaaaa
ggcagtcctgaagtgcccgctacccccacaccagcagccccagcagccccagcagctcca
gcagctccagcagctccagcagcaccagcagctccagcagctccagcagaacaaaaagag
aatgttgcagccagctccccagaaaatgctcctgtgactgagacagaagaagatcaatca
aagaccacaccgccgtcaccaggaggagcagaaggaccccctagtcctcagctgcccaat
gacacccaggatgagaagccgtctgattcttccaggaagaattcggtgtggtcgctggga
gaaggacctacagaagagggagagaagttggatgattccaagcggtccaccctgttcact
gagcagccccacagtgggacagtcactgttggtggagatatcacttttgtggcaaaggtg
gaaaccaaggatctcctgcggaagccaaacgcaaagtggttcaagggcaagtggttggac
ctggccagcaaagcggggaaacacctccagctgaaggagtcattcgacagaatcaccagg
actcacacttttgaaatgcaaattatcaaagcaaaggaaaactatgctggaaactatcgc
tgtgaggtgtcctggaaggacaagtttgacagttgctcctttgatctggaagttatcgaa
gccccggaggtccagcagatcgatatccgagctgcttttaaacgcagggctgctccagta
agtggaactgatggtcaggaagacgcaggagagcttgacttcagtggattactgaagcac
agggaggttaaggacgaaaacacggagcccgatgttgatgtctgggagctcctgaagggc
gctcagccacacgagtatgagaagattgcgtttgagcacggcatcaccgacctgaggggt
ctgctgcgtcgtctgaagaaaatcaaacgagaagagaagaaaagtgctgcttttgcaaag
gttctggaacctgggtaccaggtggagagaggtgacaagataaggctcgtggtggacttg
gcagatccaactgttgacctgaagtggtatcgcaacgggcaagaaatccgccctggtcca
aagtacatctttgaacacaaggggacattacgtatgctgaccataaaaaactgcaccaag
gcagatgatgcggcataccaggtgtcggcaggggaagagaagagtacgacagaattgttt
gttaaagagcctcccattctgatcactcgcgggctggaggacacaaatgggctggtcggg
gagagagtggaattggaatgtgaagtgtcggaggagaatgcccatttgaaatggtacaag
aatggagttgagctcggagtttcatccaagtatcgcattaggacggaggggacgaagcac
tggcttatcatccccgaggcagccaaggcggatgcagggacgtattccgtgaagaccgcg
gggggccagtcaacagcggcgctgaaagtcgagatgagaccactgaagatcctgcaaggc
ctcacagaccaggtggccaaggtgggtcaacaggccgtgcttcagtgtgaaatgtcgctg
gccaatctgcccggaaagtggtataaaaatggacaggtcatctatccgactgaccacctg
aagatatctcaaagaggaaggattcacaagttggtggtggagaaggcggctctggatgat
gatggcgattacacgttcgttcctgaaggctacacaatgcatctcggagccaaactccgc
atgatcgatcctcccaaactctacctggagagcctcacaaagtcgcctgaaatcgtggtt
gttgctggaaacaagctgcggttggacattccgatcactggggaaccaatgccaagaatc
atatggatgaagggtgacaaagcaatcctggagtctggaaaccgggtgagggcagagtca
ttccctgaccacacctccatggtcatcgatatagcggagaaagacgacactggggtctac
aagattgtggtgcagaatgaagcgggagaggacagcgccacgctgaagataaaggtcgtc
gatgtccctgaccctccgccagctccaatagttactgaggtgggaggtgactggtgctcg
atgatgtggaaccctccggactacgacggaaactcgccgattctaggctacatcatcgag
aggaagaagaaacaaagctcccggtggatgaggctcaactttgacctctgcaaagagatg
acctttgaacccaagaacatgattgaagggattccctatgaagtccaggtcattgcggtc
aacgccattgggatgtctcggcccagcgatccatccaaggccttcgtccccctcgcgcca
accagcgaacccacactgctcgcctgcgacggcgtgacggacaccagcgtctcactcaag
tggcgtccgcctgaacggatcggtgcggcggggctggatggctacctcatcgagtactgc
ctggaaggaaaggacgagtggattgtggcgaataccgagctgacggacctgacgaagtac
accatcaacggcctgccgactggcgagaagatccacgtgagagtaaaggctgtgaacgcg
gccggagaaagccccccgatcagcatggcccagtccatactcgtcaaggaggtagtggag
cctcccaagatccgtcttccccggcagctgaagcagacgtacattcgcaaagttggggag
tcgctgaatctcatgatccctttccagggaaaacccaggccaaaggtctcctggacaaaa
gatggtggtcctttggatctaagcaccatcagcattcgcaacacggaaacggacaccgtg
attttcgtccgcaaaaccgagaggtatcattccggcaattatgagcttgcggtgcaggtg
gagaagattgaggacaaggccaccattgtcattcaggtagtagagaaaccgggcgccccg
ttcactgtacatatcgttgaagtttgggacaccaatgttgagttggcatggacgcccccc
aaggacaatgggaacgcagccatcaccggctacacgattcaaaaagccgacaaaaagacc
atggactggtacacggttgttgatcactaccacagaaccaactgcttcatccccgacctc
atcgtggggaacgagtattacttcagagtctttgcggagaacatgtgtggactgagcgat
gaggcaaccagaacaaagaacagcgccttgattaagaagcagggtctgtcgctaaagtct
cctgagtacaacgactttgacttcaatgagacgccaaagttcacccatcctcttatcaat
acgatcgcggtgtctggatataacgcgaccttgaactgcagcgtgagaggcttccccaag
cccataataacctggatgaagaaccggatggtgatcgagaacaaccctcgataccggatg
ttcgcgaaccagggtgtctgtaccttggagatccgtaagcccagtccctacgacggcggc
ctgtacacttgtaaagccatcaaccctctgggcgaggatgaagtggagtgtaaaatggag
gtcaaaggtggcttccagttccatgagctgatgcttcagggaatgccgctcggtatcata
cgcttatacgtcggctcagagagtgtattaacaccgccgtga
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