Leucoraja erinaceus (little skate): 129706488
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Entry
129706488 CDS
T09122
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129706488 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129706488 (nup107)
03036 Chromosome and associated proteins [BR:
leri03036
]
129706488 (nup107)
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129706488 (nup107)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129706488 (nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
129706488
NCBI-ProteinID:
XP_055506801
LinkDB
All DBs
Position
19:35350962..35393853
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AA seq
921 aa
AA seq
DB search
MAFRRDSDEIISPLIRMSELSRSARRSSTGEQLIELRPAAKGASSVHLPVVGRAEGHIFH
EFYTAQTRVCPLRKHDLAGTSLTFQHSVTLTTPNESTHQLSFELDDIEGDEFTSQGIILK
SFASPASFTEDLTLSAVLLNVDDPGVTASARLFQEFLNSFLSHLSSPIFDLIESYEETCN
EQVKLLQKIVNRATPGQQKFSKTASVLWFLQQEMVTWRLIGSLYRDRVESSNEEGVMYDI
STPNATEKTIVEMLFQRDSLIRQSQIVVDWLESIANDEAGNFAENIEYYAKSVYWENTLH
VLKQQRSGISGFSRQLVTELDPDAPIRQKMPLADLDREDDARFMKYLFALIRAGMTDKAQ
RLCERCGQAWRAATLEGWKLYHDPNLDGGSTLESVEGNPYRSVWKACCWRMAEDEQFNRY
ERAIYAALSGNLKQLLSVCDTWEDCVWAYFRVMVDTLVEQEIRSLSPMSEFEELPKEYIE
ANWTPEAIFEEMQATDKRQVLEENKAHYHIIQKYIILGDIDGLMDEFQDWLTKCKFQLPP
HLLRFMTHLVLFLWNLGIPTKEDVCMSILKSYIEFLIGMKYIDLIAFYVRHLPQQLGIAQ
YSAFLETVTETEQRKRCLDLAREAGLDAAAVTKSVVENIRKRDAKDFTHHDLSPSLDTAT
TKEDQMKINVIEWLMFDPSQRAEALIQSNAIMRKFLASKKYEAAKEVFSKIPQDSIAEVY
ANWDDYGMESMPPAEDENAVREHLCIRAYLEAHEKFNEWFKVMQSAPPEPTLTENASFTE
TVAHEHKQKKFQIDYKRWSDNLEELTNDVKENIYNVLLFVNGGWLVDIRENGEEDVERKH
QLKLLRQLCLPAMCFLLHTVLHSTKQYQQCLKLADVISSEQHKIYQVFAKEEMAKFLRLL
RESSLMLLDQNLGPLGYELQS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggccttcagacgggactcagacgaaataatatctcctcttattaggatgtctgagctc
agcagatctgcaaggcgatccagcactggagaacaacttattgaactgaggccagctgct
aaaggagcttctagtgtacacctgccagtagttggccgtgctgaaggtcatatatttcat
gaattctatactgcacagaccagagtttgtccccttagaaaacatgatctagctggtact
tcattgacatttcaacattccgtaacattaacaacaccaaatgaatcaacgcaccaactt
tcatttgaattagatgatattgaaggagacgaattcacttcacaggggattatcttgaag
tcatttgcttcacctgcaagtttcactgaggacttaactctaagtgctgtcctattgaat
gtggatgatccaggagtaactgcatcagcccgcctgttccaggagtttttgaattctttc
ctcagccatttatctagtcctatctttgatctcattgaatcttatgaagagacttgtaat
gaacaggttaaactgctgcagaagattgtgaaccgtgcaactcctgggcaacagaagttt
tcaaaaacagccagtgttctttggtttcttcagcaggagatggtcacttggcgtttaatt
ggctctctttacagggatagagttgaatctagtaatgaagagggagtaatgtatgatata
tctactccaaatgcaactgaaaagaccattgttgagatgcttttccagcgagattcactg
atccgacagagccagattgttgtagactggttagagagtattgccaacgacgaggctgga
aattttgcagagaatatagaatattatgcaaaatctgtatactgggaaaatacactgcat
gtgttgaaacaacaaagatctggaatctctggattttcaaggcaacttgtgactgagctg
gatccagatgctcctataagacagaaaatgcctcttgctgacttggatagggaagatgat
gccagatttatgaaatatctctttgctctcatccgagctggaatgacagataaggctcag
cgactctgtgaacgttgtggtcaggcttggagagctgcaacgcttgaagggtggaaactg
tatcacgatccaaaccttgatggcggatcaacgcttgaaagtgtagaaggaaatccgtac
agaagtgtttggaaggcttgttgttggaggatggcagaagatgaacagtttaacagatat
gaacgagcaatctatgctgctctaagtggaaacctaaaacagctcctttcagtatgtgat
acttgggaagactgcgtttgggcatacttcagggtcatggtagacactcttgtggaacaa
gaaatccgctcattgagtcctatgagtgaatttgaagagttacctaaagaatacatagag
gcgaattggacaccagaggcaatatttgaagaaatgcaagcaacagacaaaaggcaagtc
ttagaggagaataaagctcattatcacatcattcagaaatacataatcttgggagatatc
gatggcctgatggatgaatttcaggattggcttacaaagtgtaagttccagcttcctcct
catctcctacgtttcatgactcatctcgtgttgttcttatggaatcttggcataccaaca
aaggaggatgtttgtatgagcattctaaaaagctatattgagttcctaattggaatgaag
tacatagacttgatagcattttatgtaagacatttaccgcagcaattgggtatagctcaa
tattcagcatttttggagactgtcacagagacggaacaaaggaaacgttgtctagacctt
gcaagagaggctggtcttgatgcagcagctgtgacaaagtctgtcgtggaaaatatcagg
aaaagggatgccaaggactttactcaccatgatctatcaccatctctggacactgctacg
acaaaagaagatcaaatgaaaattaatgtaattgagtggttgatgtttgatccttcgcaa
agggcagaagcactaatacaaagcaatgcgatcatgagaaaattcttggcttctaagaaa
tatgaagcagctaaagaagtgttcagcaaaatcccacaggattctatcgctgaggtgtat
gcaaactgggatgattatggaatggaatccatgcctccagcagaggatgaaaatgctgtc
cgggaacacttgtgtataagggcttatctggaagcacacgaaaaatttaatgagtggttt
aaagtgatgcaatctgcaccaccagaacccactcttactgaaaatgcaagtttcacagag
acggtggctcatgagcacaagcagaaaaagttccagattgattataaaagatggagtgac
aacttagaagaactgaccaatgatgtaaaagaaaatatctataatgtcttactttttgta
aatggaggatggttggttgacataagagagaatggtgaagaagatgtcgagcgcaagcac
cagttgaaattgttacgtcagctctgcctaccagctatgtgcttcctgcttcatactgtg
ttgcacagcactaagcaataccaacaatgtttaaagctggctgatgtgatttcatccgaa
caacacaaaatttatcaagtgtttgctaaggaggaaatggctaagtttttgcgattgttg
agagagtcatcactcatgctgttggatcagaatctcggacctctcggatatgaattacag
tcctag
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