Leucoraja erinacea (little skate): 129706634
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Entry
129706634 CDS
T09122
Symbol
rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129706634 (rbfox1)
Spliceosome [BR:
leri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129706634 (rbfox1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
Motif
Other DBs
NCBI-GeneID:
129706634
NCBI-ProteinID:
XP_055506972
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Position
20:complement(1642479..2541860)
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AA seq
409 aa
AA seq
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MQSPALVVSRPQRYSMQHPLTGATCVALPNVGMCPQLSCALTFMYLQQGNQEATAPPDTM
AQPYPSAQFAPPQNGIPPEYTAPHPHAAPDYTGQPTVPEHALNMYPTAQTHTEQNASDTN
AQTVSGTATQTDDTAPTDGQQQTPVNDNTDNKTQPKRLHVSNIPFRFRDPDLRQMFGQFG
KILDVEIIFNERGSKGFGFVTFENSADADKAREKLHSTLVEGRKIEVNNATARVMTNKKA
VNPYANGWKLNPVVGAVYSPEFYAVPGFPYPAATAAAAYRGAHLRGRGRTVYNTFRAAAP
PPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPAAATAAAYSDSYGRVYAAEPYHHTFTP
ATNYGISTMNAFAPLTDAKTRSLADEVGLVLSSLQASIYRGGYSRFAPY
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccccagcactggtcgtgtccagaccccagcgctacagcatgcagcatcccttg
acaggtgcaacctgtgtggctctgcctaacgtgggcatgtgcccccagctgtcctgcgcc
ctgaccttcatgtacctacaacagggtaaccaagaggccacagctcctccagacacgatg
gcacagccatacccgtctgcccagttcgcccctcctcagaatgggattccgccagaatac
acagccccccacccccacgcagccccagactacaccgggcagcccaccgtcccagagcac
gccttgaacatgtacccgacggcacagacgcacacggaacagaacgccagcgacacaaac
gcacaaaccgtgtccggaacggccacacagacagatgacaccgcgccgactgacggccag
caacaaacgccggtgaacgacaacacagacaacaagacgcagcccaaacggttacacgtg
tccaacatccccttcaggttccgggaccccgacctccggcaaatgtttggccaatttggt
aaaattttagacgtcgaaataattttcaatgagaggggatctaagggatttggttttgta
acgttcgaaaacagtgctgatgcagacaaagcgagggagaagttacacagcacgttggtc
gagggccgtaaaatagaggttaataatgccacagcacgtgtcatgacaaacaagaaggct
gtcaatccttacgcaaacggatggaagttaaacccagttgtgggagcagtgtacagccct
gaattctatgcagttcccggcttcccctacccagctgccacggctgctgctgcctaccga
ggggctcacctgaggggccgaggacgtacggtgtacaacaccttccgtgcagctgcaccg
ccccctcccataccagcctatggcggtgtcgtgtaccaggatggattttatggtgcggat
atctacggtgggtatgctgcatacagatatgcccagcctgccgctgctaccgccgctgcc
tacagcgacagttacggaagagtttatgctgccgaaccctaccaccacacatttactcca
gcaacaaactacggcattagtaccatgaatgctttcgcacccttgactgatgccaagact
aggagccttgctgatgaagtgggtctcgttctgtcttcattgcaggccagtatatatcga
gggggatacagccgatttgctccatactaa
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