Leucoraja erinaceus (little skate): 129706656
Help
Entry
129706656 CDS
T09122
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04144
Endocytosis
leri04517
IgSF CAM signaling
leri04530
Tight junction
leri04810
Regulation of actin cytoskeleton
leri05100
Bacterial invasion of epithelial cells
leri05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129706656 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129706656 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
129706656 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
129706656 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129706656 (arpc1b)
05100 Bacterial invasion of epithelial cells
129706656 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129706656 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
leri04812
]
129706656 (arpc1b)
Membrane trafficking [BR:
leri04131
]
Others
Actin-binding proteins
Arp2/3 complex
129706656 (arpc1b)
Cytoskeleton proteins [BR:
leri04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
129706656 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
eIF2A
WDR90_beta-prop_4th
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
RMC1_N
PEP5_VPS11_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
129706656
NCBI-ProteinID:
XP_055507013
LinkDB
All DBs
Position
20:complement(4484673..4518010)
Genome browser
AA seq
366 aa
AA seq
DB search
MSYHSFLLEPISCHAWNKDRTQIALCPNSHEVHIYKKEGAKWSRIHELKEHSGHVTGISW
APESNRIVTCGTDRNAYVWSLKSNVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI
SICYFEKENDWWVCKHIKKPIRSTILNLDWHPNNILLAAGSSDFKCRIFSAYIKEVEEKP
SPTSWGSKMPFGEMMFESSGTGGWVHGVCFSDSGDRVGWVSHDSTVSVTDSNKKTVTASL
NSESLPLLTVTFITENSLVAAGHDCYPVLFTYDGDKVTFGRKLDIPKQNVQRGMTARDKF
KNLDKHAKADDNVTLDTIHKNSISQITNLDGGKKNCTSFCTTGMDGGMAIWDLKSLDAEL
KGLKIA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccacagcttcctgctcgaacctatcagctgccatgcctggaataaagacagg
acccaaattgcactgtgccccaacagtcatgaggttcacatctacaagaaggagggcgcc
aagtggagtaggattcacgagctgaaagagcacagtggacatgtgacagggattagctgg
gctccggagagcaaccgaatcgtgacctgtggaaccgatcgtaatgcctacgtctggtca
ctgaagagcaacgtttggaagccaaccctggtcatcctgagaatcaaccgagccgccaga
tgtgtcaagtggtctccaaaggagaacaagtttgcggtgggcagtgggtcgcggctgatt
tcaatctgctactttgagaaggagaatgactggtgggtttgcaaacatattaagaaaccg
attcgctccactatactgaatctggactggcatcccaataacatcctgttggctgcggga
tcttctgacttcaagtgcaggatattctcggcctacatcaaggaggtggaggagaagccc
tcgcctacgtcctggggctcgaagatgccatttggagagatgatgttcgagtccagcggg
acgggaggctgggttcacggggtctgtttctccgacagtggggaccgcgtgggctgggtc
agccatgacagcaccgtgagcgtgacggactccaacaagaagacggtgactgcgtcgctc
aattcagagtctctacctctcctgactgttaccttcatcacagagaacagtttagtggca
gcgggtcatgattgctacccggtgctgtttacctatgacggtgacaaggtgacgtttggc
cggaagctggacattccgaagcagaacgtgcaacgtgggatgaccgctcgggacaagttc
aaaaacctggacaaacacgccaaggccgatgacaatgtcacgctggacactatccacaaa
aacagcatcagccaaatcaccaatcttgatggtggaaagaagaattgtaccagcttctgc
accacgggcatggatggtgggatggcaatctgggatttaaagagcctggatgcagagttg
aaaggcctgaagattgcctga
DBGET
integrated database retrieval system
