Leucoraja erinaceus (little skate): 129706657
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Entry
129706657 CDS
T09122
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-B isoform X1
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04144
Endocytosis
leri04517
IgSF CAM signaling
leri04530
Tight junction
leri04810
Regulation of actin cytoskeleton
leri05100
Bacterial invasion of epithelial cells
leri05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129706657
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129706657
09144 Cellular community - eukaryotes
04530 Tight junction
129706657
09142 Cell motility
04810 Regulation of actin cytoskeleton
129706657
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129706657
05100 Bacterial invasion of epithelial cells
129706657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129706657
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
leri04812
]
129706657
Membrane trafficking [BR:
leri04131
]
Others
Actin-binding proteins
Arp2/3 complex
129706657
Cytoskeleton proteins [BR:
leri04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
129706657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_HPS5
EIF3I
Beta-prop_WDR36-Utp21_1st
Rax2
Beta-prop_EIPR1
Beta-prop_SPT8
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
129706657
NCBI-ProteinID:
XP_055507014
LinkDB
All DBs
Position
20:complement(4525973..4548219)
Genome browser
AA seq
370 aa
AA seq
DB search
MSRHQFLFEPITCHAWNQDRTQIALSPNNHEVHIYKKGGNQWIKTHELKEHNGRITGIDW
APQSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPQENKFAVGSGARLI
SVCYFEGENDWWVSKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDTKP
AATPWGSKMPFGQVMAEFGGASSGGWVHSVSFSATGNRLAWVSHDSTVSVVDTGRNMTVS
QMKTEFLPLLSVIFVSETSIVAAGHDCCPMLFVYDDRGSLNYISKLDIPKQSIQRNISAM
QRFHNLDRRATTEDRNATLETLHQNSITQVSIYEGDKRDCWKFCTTGIDGAMTIWDLKTL
ESSIQGMRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccatcaattcttgtttgaaccaattacatgtcatgcctggaatcaagatcgg
acacagatagcacttagtcccaataaccacgaggttcatatttataagaaaggtggaaat
cagtggatcaagactcatgaactgaaagagcataatggtcgaataacaggcattgattgg
gctccccagagtgatcgcattgtaacctgtggtgctgaccgtaatgcttatgtatggagt
cagaaagatggtgtgtggaagccaaccttggtcattctaagaattaaccgtgctgccaca
tttgttaagtggtctcctcaggaaaataagtttgctgtgggcagtggtgcccggctgatc
tcagtatgctactttgaaggagaaaatgattggtgggtgagtaaacacattaagaagcca
attcgttctactatccttagccttgactggcatcccaataatgtcttactggcagcaggt
tcatgtgacttcaaatgcagagttttttctgcttacattaaagaagtagacacaaaacct
gcggccacaccttggggttccaaaatgcctttcggacaggtgatggcagagtttggtggt
gccagtagtggtggctgggtccacagtgtttctttctctgccacaggaaaccgcctggca
tgggtcagtcacgacagcactgtatctgttgttgacactggtagaaatatgacggtttct
caaatgaagactgaatttctccccctgttgagtgtgatttttgtctctgaaactagcata
gtggcagcaggccatgactgctgcccgatgctctttgtgtacgacgatcgtggctcttta
aactacatctctaagctagacattccaaagcagagcattcagcgcaacatctctgctatg
cagcgtttccacaatctggatcgaagggcgaccacagaggatcgaaacgccacactcgag
accctccaccagaacagcatcacccaagtctccatatatgaaggcgataagagagattgt
tggaagttttgcactactgggattgacggtgcgatgacaatttgggatttgaagactctg
gaatcctcaatccaaggcatgcgtatcatgtga
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