Leucoraja erinaceus (little skate): 129706662
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Entry
129706662 CDS
T09122
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04120
Ubiquitin mediated proteolysis
leri04137
Mitophagy - animal
leri04144
Endocytosis
leri04340
Hedgehog signaling pathway
leri04350
TGF-beta signaling pathway
leri04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129706662 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
129706662 (smurf1)
04350 TGF-beta signaling pathway
129706662 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129706662 (smurf1)
04137 Mitophagy - animal
129706662 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
129706662 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129706662 (smurf1)
04121 Ubiquitin system [BR:
leri04121
]
129706662 (smurf1)
03029 Mitochondrial biogenesis [BR:
leri03029
]
129706662 (smurf1)
Enzymes [BR:
leri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129706662 (smurf1)
Membrane trafficking [BR:
leri04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
129706662 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
129706662 (smurf1)
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
HECT type E3
129706662 (smurf1)
Mitochondrial biogenesis [BR:
leri03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
129706662 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
129706662
NCBI-ProteinID:
XP_055507023
LinkDB
All DBs
Position
20:complement(4678171..4744658)
Genome browser
AA seq
773 aa
AA seq
DB search
MCKSIFSHSSIKKFYFNTARRKKSGSLLGGKKGGILQVMSNPGARRNGSSIKIRLTVLCA
KNLAKKDFFRLPDPFAKIIVDGSGQCHSTDTVKNTLDPKWNQHYDLYIGKADSITISIWN
HKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPTDGDTIRGQIVVSLQTRDR
IGTGGPVVDCRGILDNDLPEGPLFEDSGPGRPLSCIMEDTVPYPDITGAAGGGNCQLIES
PNQEQRLQAQRIRNFGVRVQMHTPQSRPHGHQSPVLPEGYEQRTTVQGQIYFLHTQTGVS
TWHDPRIPRDLTNFNYDELGPLPSGWEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIMSNP
SQLKESNQTLPAPPEVPVEEGEGEWSVPRCERDLVQKLKVLRHELALQQPQAGHCRIEVS
RDEIFEESYRQVMKMRPKDLKKRLMVKFRSEEGLDYGGVAREWLYLLCHEMLNPYYGLFQ
YSTDNIYTLQINPDSAVNPEHLSYFHFVGRIMGLAVFHGHYINGGFTLPFYKQLLGKPIQ
LSDLETVDPELHKSLVWILENDITPVLDHTFCVEHNCFGRIIQQELKPNGRNVPVTEENK
REYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKEIELIIGGLGKIDIKDWK
ANTRLKHCTSDSNIVKWFWQTVEMFDEERRARLLQFVTGSSRVPLQGFKALQGSTGAAGP
RLFTIHLIDANTENLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaatctatcttttctcattcgtcgataaagaaattctattttaatacggcgcgc
aggaagaagagcggctcgttgctgggggggaaaaaagggggcattttacaagtaatgtcg
aaccccggagctcgacggaacgggtcaagcattaaaatccggctgacagtgttgtgcgcg
aaaaatttggcaaagaaagatttcttcagattacctgacccttttgctaaaattattgtt
gatggctccgggcaatgtcattcgacagacacagtaaaaaacacacttgatccaaaatgg
aaccaacactatgacttgtacattggaaaagcagactcaattactataagcatatggaat
cacaagaaaatacataagaaacagggagctggcttcctgggttgtgttcggctgctatca
aatgccatcagtagactaaaggatactggctatcagcggttggatctatgcaagctcaat
cccacagacggcgatacaatacgaggacaaatagttgtaagtttacaaactcgagatcga
ataggaactggtggtcctgttgtcgattgcagaggaatactagataatgatctacctgag
gggccactttttgaagattctggacctggaaggccgctaagctgtatcatggaagacaca
gtcccatatccagacataactggtgctgcgggtggagggaattgccagttgatagagtct
ccaaaccaggaacagagactgcaggctcagcgaatccgtaactttggtgttcgagttcaa
atgcacacgccacagagccgacctcatggacatcagtctcctgtgctaccagagggatac
gagcagcgaacaacggtacagggacagatttacttcctgcacacacagactggagtcagt
acttggcatgatcctcgaataccaagagatcttacaaattttaactatgatgagcttggt
cctttgccttccgggtgggaagtcagaagtacagtgtcaggaagaatatattttgtagat
cataacaaccggacaacacagttcacagatcccagactgcaccatataatgagtaatccc
agtcagttgaaggaatcaaatcagaccttgcctgcaccacctgaggtaccagtggaagaa
ggagagggagagtggtctgtcccacgatgtgagcgagatctggtgcagaagttgaaagtc
ctgaggcatgagcttgctttgcaacaaccacaagcagggcattgtcgtattgaagtctcc
cgggatgagatctttgaggaatcataccgtcaagtaatgaaaatgagaccaaaggacttg
aagaagcgtttaatggttaaatttagaagtgaagagggtttggattacggtggagtagcc
agggagtggttgtatttgctctgtcatgagatgttgaatccttactatgggctatttcaa
tattcaactgataatatctacacactacagatcaatccagattccgcagtcaatcccgag
cacttgtcatatttccattttgtgggccggataatgggactggctgtattccatggacac
tacattaacggtggtttcacattaccgttttataagcagctgttaggaaaacctatccag
ttatcagacttggaaactgtggacccagaattgcacaagagcttggtttggatccttgaa
aatgatattacgccagtgcttgatcacacgttttgtgtagaacataactgttttggtcgg
attattcaacaagagctgaaaccaaatggcagaaatgttcctgtaacagaagagaataag
cgagaatatgttaggctttacgtgaactggagatttatgagaggaattgaggcacagttt
ctggctctgcagaagggatttaatgagcttattccacagcatctccttaaaccttttgat
cagaaagaaattgagcttattattggtgggttggggaagattgacataaaggactggaaa
gctaacacacgtttaaagcattgcacgtctgacagcaacattgtgaagtggttctggcaa
acggtggagatgtttgatgaggagcgaagagcacgactacttcagtttgtaactggttct
tccagagtacctctgcagggattcaaggcactacaaggttctacaggtgctgcaggccca
aggcttttcaccatccatttgattgatgccaacacagaaaaccttcccaaagcacataca
tgttttaatcgtatagacatccctccttatgagtcttacgaaaagctttatgagaaattg
ttgacagcagtggaagagacatgtggctttgcagtggagtga
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