Leucoraja erinaceus (little skate): 129706705
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Entry
129706705 CDS
T09122
Name
(RefSeq) NFX1-type zinc finger-containing protein 1-like
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
129706705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
ZNFX1
AAA_11
AAA_19
AAA_30
ResIII
DEAD
Viral_helicase1
AAA_22
SLFN-g3_helicase
PhoH
nSTAND3
NPHP3_N
PRT_C
Motif
Other DBs
NCBI-GeneID:
129706705
NCBI-ProteinID:
XP_055507085
LinkDB
All DBs
Position
2:complement(5648731..5704251)
Genome browser
AA seq
1910 aa
AA seq
DB search
MDCDQQLLSMLSKLMRETKGAGSQVQKVQPPGSQVRRPHHSTSKQASQQHSKDQKSGNKQ
TPMAFKAVESHPKPANKAHNHPSVHHAHQASGGARNQRKPPHSTSGPKQAQEESVRPKSA
GAKGGQQLRPPQQQFKHVQMRSQTICAKDRIKHRDQSEPRRRMPMAMSDVARESSTMNGI
QKQQRPRGRQPFQQGKGKNDFPIRSENDSQQHHQRPWTPWKRGNAHQRQDTKPAAKEFSK
PNQPEPATLDEEEFMQLEAMAPVDIVMKLASPISGLIEFLKEENTEKNLIASFLKILSAT
FNCKSNQHSLHYLLELIKKSMFLKITLPKFIMSALTEVLPEAHLETSRYLGYTLKLLCQL
ITVYPASAFVEVSLLATLVQSTSNHMQSIGFPVSEETGKSLENLHQMVAFLQERQKYGNL
KSDTYTYFVKPEGNEFRHISIYPTYADVHLIDKPFVRPNIINEEYPDTATYLDIQFRLLR
EDFVRPLREGISNLLSCNQKDLRKGKTDDIRIYFDAQVLGPLCTHTGVYYRVRFNVKQLK
FVQWESSKRLLYGSLLCLSKDNFETMLFATVAHRTVRELMKGIIHLSFTEDSRLDLVDVK
PTDSFLMVETIAYFEAYRHVLEGFKQIRDDEIPFQKYIVHCQTNIAEPKYLKGTSQNYTL
EPLSRSNNFNVFDFAKWPSKERLKLDESQIQAVQTALTKELAIIQGPPGTGKTFLGLKIV
SVLLSNINIWKSATGSPILVVCYTNHALDQFLEGIHTFLGTGLVRVGGRSDSKILADFTM
HALRKQPAFRRNLPKYMKCMYPALIEGREEIELKIESLAVYLEASAKGVLKLGILSEYIQ
PNHLKSLQVGSQYNPSKRYDILEWLKLTSAHTFYFASKATQQQSKEDDWDETASSVTEGD
LGNLSDLIDEGGDDDELIKVTVEAELIQAERMVDEDDLQKQIQNARARRAALEKQFLALN
LNEDAPPLKSQSKNQDGGEWQVSKESMAKMKRKTKHQLQLTDIMSEDEATKRVNIWDLDM
VDRWRLYRLWLSKYQVKIKHEILKYEQEYQEIVNRLAELRTQEEIMILRQSKVVGMTTTG
AAKFRNLLQDIQPKIVIVEEAAEVLEAHIITTLSSACEHLILIGDHQQLRPSATVYELAR
KFNLEVSLFERLIRMEVPFVRLDYQHRMRPEIAKLITPHIYDKLKNTESVKKYENIKGIS
TNLYFIEHQEPEDNIKEGKSYQNSHEAHFVKLLCEYFIQQEYHPSQITILTTYSGQLFCL
RNVMPKRIFDGVKVCVVDKYQGEENDIVILSLVRSNKQGVVGFLRIPNRVCVALSRAKKG
FYCIGNMAMLAKQVPLWANIVGTLRENNQIGPSLRLCCQNHPGTDALVSTAEDFSQVPKG
GCLVPCEFSLPCGHKCTLPCHPFDPEHIEYRCPGPCQNKCKVGHPCHKACWQICGDCTVK
VEQVIPGCGHRQQVPCCVDPWRFCCQEPCEKTLDCSHRCLRCCGDSCTEKCPSRVEMALP
CGHTRMIKCHQREEAEAEPCLANCGAPLSCDHPCAARCFECSALPFHAVCPVSCAHPLPC
SHPCKGICGVACPPCAQPCGNCCPHGRCPGSCGQPCQPCQRPCTWACPHAKCTRLCHEAC
DRAPCDQPCHLTLDCGHPCIGLCGEPCPDKCRVCHVEEVTEIFFGGEDDPETRFLQLQDC
RHIFAVKEFDTLMQQSEADESSASELPLCPKCSAPIHNNVRYGTLIKNVLAKIERLKVKI
VGDEEEVRCRRVCLENFLEEKEELNEYYPRETLDLQFQLQESNISLHKLTTLGHKINLLS
KVANLKSKERELVSYRRKMMQEEIDLLVEKITKKRSQFTSPELGDIEREITTLKQQNKLY
FIQNPKKRDPFPPAPQPFFKLLPSLTGDATYKAWKEERINRLKSKSADLI
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atggactgtgatcaacaactactatccatgttgtccaagcttatgagggagacaaaaggg
gcaggttcccaggtccaaaaggtgcagccacctggaagccaagtgagaagacctcatcat
tcaaccagcaaacaggcaagtcagcaacattcaaaagaccaaaagtctgggaataaacag
actcctatggcatttaaagcagttgaaagccaccccaaacctgcaaacaaggctcataat
catccttcagtccaccatgcgcatcaagcttctggaggtgccaggaaccaaagaaaacca
ccccattcaacaagtggtccaaagcaagcccaggaagaaagcgttcggccaaaatcagca
ggagcaaaaggcgggcagcagctgaggccgcctcagcagcaattcaaacatgtgcagatg
agatcccagactatatgtgcgaaggacagaatcaagcaccgtgatcagtctgaacctcgc
aggagaatgcccatggccatgtcggatgttgccagagaaagtagtaccatgaatggaata
caaaagcagcaaagacctcgagggagacagcctttccaacagggaaaggggaagaatgac
tttccgattagatctgaaaacgattcacagcaacatcaccaacgcccgtggactccatgg
aaacgtggaaacgctcatcagcgccaggacactaaaccagctgctaaggaattcagtaaa
cctaatcaacctgagccggcaactctggatgaagaagaattcatgcagcttgaagcaatg
gcaccagtggacattgtaatgaagttggcctctccaataagtgggctcatcgaattctta
aaggaggaaaatacagaaaaaaacttgatcgcatcctttctgaaaattctcagtgcgaca
ttcaattgcaaatccaaccagcacagtttgcattatctgctggagctaatcaagaaatcc
atgtttctgaaaatcaccctgccaaaattcatcatgagtgctctgacggaagtcttgccc
gaggcacatttggagacttctagatatcttggttatacattgaagttgctctgtcagttg
atcactgtctatcctgcaagcgcttttgtggaagtgtcccttctagctacgctagtgcaa
tccacgtctaaccacatgcaatctattggcttccctgtctcagaggaaactgggaagagc
ttggagaacctgcaccagatggttgcttttttgcaggagagacagaaatatgggaacttg
aagtcggatacctacacctactttgtgaaaccagaggggaatgaatttagacacatttca
atatacccgacctatgctgacgtccatttaatcgacaagccttttgtgagaccaaatata
atcaatgaagaatacccagacactgccacatacctggacatacaatttcgcctgctgcgt
gaagactttgttcggcctctgagggagggtatttccaacttgctgagctgtaaccaaaag
gatttgcggaaaggaaaaacagatgatatcagaatttattttgatgcccaagtcctgggt
ccactgtgtacacataccggtgtctactatcgggttagatttaatgtgaaacagttaaag
tttgttcagtgggagagctccaagcggctactgtatgggtctttactttgcctctcaaaa
gacaactttgaaacaatgctgtttgcaacagtggcacacagaactgttcgggaactgatg
aaaggtattatccacctcagcttcacggaagacagtcggctggacttggtggacgtaaaa
ccgacggattcttttctgatggttgaaacaattgcatactttgaagcctatcgccatgtt
ctcgaaggctttaagcagatcagagacgatgagataccctttcagaagtacatagttcat
tgccagactaatattgcagaaccaaaatatctaaaaggcacttctcaaaactacaccctg
gaaccattgtcccggagtaataatttcaatgtatttgactttgcaaaatggccctctaag
gagagattaaaattagatgaatctcaaatacaggcggtgcagacagcgttaaccaaggaa
cttgctatcatccaggggcctccaggaacaggaaagacatttttgggactgaaaattgtc
agcgttctcctgtccaacataaatatttggaagtccgctactggttcccctatactggtg
gtctgctacacaaatcatgcattggaccagtttttggaaggaatccacacctttctggga
actgggctggtcagagttggaggaagaagcgatagtaaaattctagccgattttactatg
cacgcgttaagaaagcagcctgccttcaggagaaatctccccaagtatatgaaatgcatg
tatcctgcgctgattgaaggaagagaagagatcgagctgaaaattgaatcattggctgtg
tatttggaagcaagtgcaaagggagtccttaagttaggcatcttatcggaatacattcaa
ccgaatcacttgaagagtctacaggtgggctctcaatataatccatcgaagagatatgat
attctggaatggttaaagttgacgtcagcacacacattttatttcgcatccaaagcgaca
caacaacagtccaaagaagatgactgggatgagacggcctcaagtgtcactgagggagac
ctaggaaacctcagtgacctgattgatgaggggggtgacgatgatgagctgattaaggtg
actgtggaggctgaactgatacaagcggagagaatggttgatgaggatgacctgcagaaa
caaattcaaaacgcacgtgcacgccgggctgcattggaaaaacaattcctggcattgaat
ctcaacgaggatgcaccccctttgaaatcccagtctaagaaccaagatggtggcgaatgg
caggtcagcaaagaaagcatggcgaaaatgaaaagaaagacgaagcaccagttgcaactc
acagacatcatgtcagaagatgaagccacaaaaagagttaatatctgggatcttgacatg
gttgatcgctggcgactgtacaggttgtggttgtcaaagtaccaagttaaaatcaaacat
gaaatattgaagtatgagcaggaataccaggaaatcgtcaatcgccttgcagagctgaga
acccaagaagaaataatgatacttcgacagtcaaaagttgttggaatgaccaccacaggg
gctgcaaaattcagaaatctgctgcaagatattcaaccaaagattgtcattgtagaggag
gcagctgaagtcctggaagcccacatcatcaccactctcagctctgcctgtgaacatctc
attttaattggtgaccatcagcagctgcgcccaagtgcaacagtgtatgagctggcaaga
aagttcaacttggaagtctccttatttgagcggctgatacgaatggaagtgccctttgtg
cgacttgattaccaacatcgaatgcgccctgaaatcgcaaaactgataacaccacacatc
tatgacaaactgaaaaacactgagtctgtgaagaagtatgaaaacattaagggaatctcc
acaaacctctacttcattgaacaccaggagccagaggataatatcaaggaaggaaaaagc
taccaaaattcccatgaagcgcactttgtcaagttactttgcgaatatttcatccagcag
gagtatcatccatcacagataaccatccttaccacctactctggtcagctgttctgcttg
aggaatgtaatgcccaaaaggatatttgacggagtcaaggtctgcgtggtcgacaagtat
caaggggaagaaaatgacattgtgattctatctctcgttcggagcaacaagcagggcgtg
gtcgggttcctgcggataccgaatcgagtctgcgtggctctgtcgagggcgaagaagggc
ttctactgcatcggcaacatggccatgctggcaaagcaggtccctctgtgggcaaacatt
gtggggacactccgtgagaacaaccagatcggcccctcgctgcggctgtgctgccagaac
cacccgggaacagacgccctcgtgtccacggctgaggatttcagccaggttcccaaaggc
gggtgcctggtgccctgtgaattcagcttgccgtgcggccacaagtgcactttgccctgc
catccttttgaccccgagcatattgagtaccggtgcccgggaccttgccagaacaaatgc
aaagtgggacacccctgccacaaagcttgctggcagatctgcggggattgcacggtgaag
gtggaacaggtcatccccgggtgtggtcaccgacagcaggtcccgtgctgtgtggatcca
tggcgcttctgttgccaggagccctgcgagaagaccctggactgcagccaccgatgcctg
cgctgctgcggggatagctgcactgagaagtgccccagcagggtcgagatggcactgccg
tgcggccacacgagaatgataaagtgtcaccagcgagaggaggctgaggccgagccctgc
ctcgcgaactgtggggcgccactgtcctgcgaccatccctgcgcagcccgctgcttcgaa
tgcagtgccctgccgttccacgccgtttgccccgtttcttgcgcccacccactgccctgt
tcccacccgtgcaagggcatctgcggcgttgcttgcccgccctgcgcccagccctgtggc
aactgctgcccgcacggcaggtgcccgggcagctgcggccagccttgccaaccctgccag
cgaccctgcacctgggcctgcccccatgccaagtgcacccggctgtgccacgaggcttgt
gaccgggcaccttgcgaccagccctgccacctgacgctggactgcggccatccctgcatc
ggcctgtgcggagagccctgccccgataagtgtcgcgtctgccacgtggaggaggtcacc
gagatattctttggtggggaagacgaccctgaaaccaggttcctgcagctgcaagattgc
cggcacatttttgcggtgaaagagttcgacacattgatgcaacagtcagaagccgacgaa
tcctcagcatcggagctccctctttgccccaaatgctcggccccaatccataacaatgtc
cgctacgggaccctcattaaaaatgtgctggctaagattgagcgtctcaaagtcaagatc
gtgggagatgaggaagaggtcagatgccgcagggtgtgccttgaaaactttctggaagaa
aaggaagaattaaatgaatattatcctcgggaaaccctggatctacaatttcagctacaa
gaatccaatataagtctgcataagctgaccacccttgggcataagattaacctcctatcc
aaagttgccaatctgaaatccaaagaaagagaactggttagttatcgtagaaaaatgatg
caagaggaaattgacctgttagtagagaagattacaaaaaagagatctcagttcaccagt
ccagagcttggagacatcgaaagagagatcaccacactgaaacaacagaacaaactatac
ttcattcaaaatccaaagaaaagggatccattccctccagcaccacagccattctttaaa
ctgctaccatctcttacaggagatgcaacttacaaagcatggaaggaagaaagaattaac
agattgaagagtaaatctgctgatctgatatga
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