Leucoraja erinaceus (little skate): 129706743
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Entry
129706743 CDS
T09122
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1-like isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04120
Ubiquitin mediated proteolysis
leri04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129706743
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
129706743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129706743
Enzymes [BR:
leri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129706743
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129706743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Herpes_LMP1
Motif
Other DBs
NCBI-GeneID:
129706743
NCBI-ProteinID:
XP_055507160
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All DBs
Position
20:9037207..9128137
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AA seq
553 aa
AA seq
DB search
MGSVLSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAAHEPVKTLRSLVNIRKDSLRLVRYKDEADDSPDENSKPKVLYSV
EFTFDADARVAITIYCQATEEFQSGMAVYTSKHPSMHSETVHCKRGVSQHFSLPSFKIDF
SDWKEDELNFDLEKGVFPLVIRAVVDEVDEYSGHAHILLAAMEKHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCSTC
ADTLRYQANNCPICRLPFRALLQIRAVRKRAGALSPVSFSPVLAQTMDHDDHSASDHVPP
GFEPVSLLEALNGLRSVSPSIPPAPLYEEINYSGIGDGLSPSSRQLSAIDRMVDNCPQKP
KLSKSSESSLRSPSSPIQEEDEEKLSEDSDLLQKNGPQLQSGTSSQEVEKTEDSPEKHTH
SPVDRPRSEEIVQDSTNEYGSHAKEDGDTPLAISLPGTSDSTESLKSQSTNSSSQPLLAA
SNAVLIEDESQVP
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgggctcggtattgagcaggaggatcgctggggtcgaggatatcgacatccaggccaac
tcggcctacagatacccgcccaagtctgggaattattttgcaagccatttcttcatgggt
ggtgagaagtttgatacgccacaccccgagggttacctttttggtgagaacatggacttg
aatttcctgggaaatcgtcctgtgcagtttccatatgtgacaccagctgcccacgagccg
gtgaagaccttgcgcagtttggttaatattcgaaaagactctcttcgtttggtcagatac
aaggatgaagctgacgattctcctgatgagaattcgaagccgaaagtgctttacagtgtg
gaattcaccttcgatgccgatgcacgtgttgccataacgatctactgccaggcaacagag
gagttccagagtggcatggcagtatatacatcaaagcacccatccatgcactctgagact
gtccattgcaagagaggagtgagccagcatttctctcttccttcttttaagattgacttc
tccgactggaaggaagatgagttgaactttgatctcgagaaaggagtttttcctttagtc
attcgggccgtggtagatgaagtggatgaatactctggtcatgcccatattcttttggct
gcaatggaaaaacatgtcgatggaagcttttctgtgaagcccttaaagcaaaagcagatt
gttgaccgagtcagttatttattacaagaaatatatggtattgaaaacaaaaataaccaa
gaaacaaagccttcagatgatgagaacagtgacaacagcaatgaatgtgttgtatgcttg
tctgatctgcgagatactttaatcctaccttgcagacatctgtgcttgtgcagcacctgt
gcagatacactacgttaccaggcgaataactgtcctatctgcaggctaccatttcgtgca
ttgttgcaaatccgagctgtgagaaaaagggctggggctttgtcacccgtgtcgttcagt
cctgtcttggcacagactatggatcacgacgatcattcggcatctgaccatgttcctcct
ggatttgagccagtttcccttttggaggctttaaatggattacgatcagtttctccgtct
atccccccggctccattatatgaagaaataaactattcgggaattggagatggtttgtct
ccatccagcagacagctatcagcaatagataggatggtggataactgtccccaaaagccc
aaactgagcaaatcctccgaaagcagcctgcgatctccatcttcccccatacaagaagaa
gacgaagagaaactctctgaagattctgatctgttacaaaagaatgggccgcagctccaa
agtggaacaagctcccaagaagttgagaaaacggaagattccccggaaaaacatacgcac
agtccagttgacagacctcgctctgaggaaattgtacaagatagcaccaatgaatacggt
agccatgctaaagaagatggggacactcctcttgcaatttccctacctggaacttcggac
tctaccgagagcctgaaaagccagagcaccaacagctcatctcaacctctccttgctgcc
tcaaatgctgtcctcatagaggatgagagccaggttccttga
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