Leucoraja erinaceus (little skate): 129706928
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Entry
129706928 CDS
T09122
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
leri01002
]
129706928 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129706928 (usp42)
Enzymes [BR:
leri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129706928 (usp42)
Peptidases and inhibitors [BR:
leri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129706928 (usp42)
Ubiquitin system [BR:
leri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129706928 (usp42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
PilJ_C
Motif
Other DBs
NCBI-GeneID:
129706928
NCBI-ProteinID:
XP_055507555
LinkDB
All DBs
Position
20:complement(20863054..20930965)
Genome browser
AA seq
1440 aa
AA seq
DB search
MTIVDKVTEASNTAACKNQICSSVAPFSGIAKEKNMEPGTASWGATSPITEVPKNKILGP
MPGAALYTNAMSLQEKSKQPVQKDQNVLGSGDGIAPPQKVLFPAEKILLKWQQIHKIGAG
LQNLGNTCFLNSALQCLTYTPPLANYMLSREHSRTCNEQGFCMMCMMQNHITQVFSNSGN
VIKPMSVINDLRRIAKHFRFGNQEDAHEFLRYTVDALQKACLNGSNKLDRQTQATTMIYQ
IFGGYLRSRVKCLNCKGVSDTYDPYLDIALEIKAAPNITKALEQFVKPEQLDGENAYKCT
KCKKMVPASKRFTVHRASNVLTLSLKRFANFTGGKITKEVRYSEYLDVRPYMSQSNGEPV
VYALYAVLVHSGFSCHAGHYYCYIKASNGQWYQMNDSLVSTSDIRSVLNQQAYVLFYIRS
HDTKNGTKHSNHMGQSSPRPPVNQRLTNNQALTGFIGPQLSPQMTKKSNHLTNGNCTVKD
IHSNAAAGTSGSRTISTPPGPSPGRLLPRPTTLPESSKRQKLSFSIQPSKPGTRQAQPPT
KLHSSPLDNLYKAPSTASHTSVSPSTSGTSAAATPPSIPPAATVVATQSVESNAASSHLM
VNGQPKGPASSLVPYNEESSEESDEEPKGLIKENGYAKSLNRAVNGTGPSTYLKMNSMSA
ATSDDSCPKMPSEMDATDALRGTRDHGRHQASEPIVPQMLSADCPANGLSAKESPSAVEV
CPSVQNPNIENIMFNSTGRKNGYEEARGNEHHLVLLSKSSSAINHSGGGGDADTVQTCLT
KKESSLSSTLQEAADGMSTLSPVDPCKGNGDFQRKADDCCVPSSIPIKRSPVHNAQTIQE
KTDSEKQTEERIKQSQSKKVWAMDHTTNGHSFENNKQASQDPASKLSEMENHQIKPQSDS
NHKGVLESGIQTNAVHAHNKANISQDDTSPAGKYDHSTEKHQIDRETDDQKKNWVFEENG
RLVNKVRLQKEGITKEAHQKPEQEPTGLVIATVKESSNQNKNSNSELDNTYKTAALSPVI
VTVGPEERRIQEKESTVTVHAEPLSRASTCEEKGRLLQRDNYKGDSNYRHRSRERRERRL
SQNETEVEKSSCSYSNSSHKVDHQDGRIDKYQRDNDCPSDRHSYCNSKPLQSSHHSYQDN
LHREKFSSGSTGKSWSNQFEYNGLEYRGERKRKCCDSETGDSDGERKWKRFSRDLQSEER
RMKRHRKSKKRKESKDKHKDRNHRQHPLHTSELSSGTDERKHRKKKKKKKKRKRHHDDKD
SHYQKDHHHSRKHQGVKSANVTGDRERICEAAQSSCPEDKMHRYKPTCDDRMQQKAKAAH
ADDKQNGPHLHGREEILNEHNGGISRHLPDHTGSGSISDRHTEWTRTRLENGTDLYRHSK
PDKEHLREKHYSHSYKECCPVDNRSSFSGVSSFRGSTRRKSDEKRCVEQKPHYACMEGKL
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgataaagtgactgaggcctcgaacacagcagcttgcaagaaccagatc
tgcagctctgtggcacctttctctggaatcgccaaagagaagaatatggagccaggaaca
gcaagttggggtgcaacatctcctattactgaggtacccaagaacaaaatcttaggacct
atgcctggagctgctttatacaccaatgcaatgtctctacaagagaaatcaaagcaacca
gtgcaaaaagatcaaaatgtgctgggcagtggcgatgggatagcacccccacagaaagta
ttgtttccagcagagaagattttgttgaaatggcagcaaatccataaaattggagctggc
ctccaaaacctgggcaacacctgtttcctaaattctgctctgcagtgcttgacctacacg
ccgccacttgcaaactacatgctgtcccgagaacattccagaacatgtaacgaacagggt
ttctgtatgatgtgcatgatgcagaaccatattacccaggtcttttccaattctggaaat
gttatcaagcctatgtccgtcattaatgatctcagacgaatagctaaacattttcgattt
ggaaaccaggaagatgcacatgaattcctccgttacacagtggatgctctccagaaagca
tgcctaaatggaagcaacaaattggacagacaaacacaggccactacaatgatatatcaa
atttttggaggttacttaaggtcgagagttaaatgcttaaactgcaaaggagtttctgac
acatatgacccatatttggatattgctctggaaataaaggcagcaccaaacatcacaaaa
gctctggagcagtttgtgaagcctgagcagcttgatggagaaaatgcctacaaatgtacc
aagtgtaagaaaatggtgcctgcctcaaagagattcaccgtccatcgagcatcaaatgtg
ttgacgctctctctaaaacgctttgctaactttacaggtggaaagatcacaaaggaagta
cggtattctgagtatctggacgttcggccctatatgtcccagtcaaatggagagccagtt
gtgtatgccttgtatgcagtattggtacattcaggcttcagctgtcatgctggccattac
tactgctacatcaaggcaagtaatggacaatggtaccagatgaacgattctcttgtatcc
acaagtgacatccgatcagtgctgaatcaacaagcttatgtgctgttttacatcagatcg
catgacacaaaaaatgggacaaagcattcgaatcacatgggccagtcatctccaaggccg
cctgtcaatcagaggttgaccaacaaccaagctctcactggatttattggaccacaactc
tccccacaaatgaccaagaaatcaaatcacttaacgaatgggaactgcactgtgaaagat
attcacagtaacgcagcagccggcacgagtggcagcaggacaatttctacacctcctggg
ccctctccgggtcggttactgcccaggcccaccaccttgcccgaatcgtccaaacggcaa
aagctttccttcagtatacaaccttccaagccagggacgagacaggcccagcccccgacc
aagctccacagtagtccgttggataacctttacaaggctccgtcaacagcttcccatacc
agtgtttcaccttctacctcgggaacctcagctgctgcaaccccaccctccattccacct
gctgctaccgtcgttgccactcaatctgtggagtccaacgctgcctcttctcacttaatg
gtgaacggtcagcccaagggacctgccagttctttagttccgtataacgaggaatcctcg
gaggaatctgatgaagagcccaagggcttgattaaggagaatggctatgcaaagtccctg
aatagagcagttaatggaactggacccagcacgtatctcaaaatgaattccatgtctgca
gccaccagtgatgactcttgcccaaaaatgccgtctgagatggatgccactgatgcactt
aggggcacaagggatcatggcaggcatcaggcatctgaacccattgttcctcagatgctg
tctgcagattgccctgcaaatggtttatctgcaaaggaatcaccatccgctgttgaagtc
tgtccttctgtccagaacccaaacatagaaaacataatgttcaactctacaggcagaaaa
aatggctatgaagaagccaggggaaatgaacaccacttggttctcctatcaaaaagcagt
tctgcaataaatcacagtggtggtggtggtgatgcagacacagtccaaacgtgtttgacg
aagaaagaatcgagcttgagttccacgttgcaggaagcagctgatggaatgtctacatta
tccccagttgatccctgtaaaggtaacggcgattttcagagaaaggctgatgactgctgt
gttcccagcagtatccccatcaaacggagtcctgttcacaatgcacaaaccatccaggag
aaaactgacagtgagaaacaaactgaagagagaatcaaacagagtcagagtaaaaaggtc
tgggcaatggaccacacaaccaatggacacagttttgaaaataataaacaggccagccaa
gatcctgccagtaaattgtcggaaatggaaaatcaccaaattaaacctcaatctgattcc
aaccataaaggcgtcttggaaagtgggatccaaacaaatgcggtccacgctcataacaag
gcaaatataagtcaagatgatacttctccagcagggaaatacgatcattcaactgagaaa
catcagattgatagggaaacggatgatcaaaagaagaattgggtgtttgaggaaaatggc
cgacttgtcaacaaagttcggcttcagaaagagggtatcacaaaggaagcacaccagaaa
ccagagcaggaaccaactgggttagttatcgcaactgtcaaggagagctctaatcaaaat
aagaacagcaattcagaacttgacaatacttacaaaactgcagccctttcaccagtcata
gttacagttggtccagaggaaaggaggattcaggagaaggagagcactgttactgtccac
gcagagcctctgagtagggcatcgacctgcgaagagaaaggtagactattgcaaagggat
aattacaagggtgactccaactacaggcacaggtccagggaacgaagagaaaggaggtta
tctcaaaatgaaacagaggttgaaaaatcaagttgcagttacagtaattcgtctcacaaa
gtagaccatcaagatgggagaattgataaatatcaaagagataatgactgtccatctgac
aggcacagttactgcaattcaaagccactgcagtcttcccatcactcctatcaggataat
cttcacagagagaaattcagctctggttccacagggaagtcgtggagcaatcagtttgag
tacaatggactggaatacagaggcgaacgtaaaaggaaatgctgcgacagcgagaccggt
gacagtgatggcgaacggaaatggaaacggttctcccgggatttgcaatccgaagagagg
agaatgaaaaggcacaggaaatcaaagaagagaaaggagtcaaaagacaaacacaaagat
agaaatcataggcaacatccgttgcatacgtccgaactaagttctggaactgacgaacga
aaacacaggaaaaagaaaaagaagaagaagaagaggaagcgacatcacgatgacaaagac
agccattaccaaaaagatcaccaccattccaggaagcaccagggtgtgaaatcggccaac
gttacaggtgaccgggagcgcatctgtgaagcagcccaaagcagctgccctgaagataag
atgcacagatataaacccacgtgcgacgaccgaatgcaacagaaagctaaagctgcacat
gcagacgacaagcagaacggtcctcacctccacggcagagaggaaatattgaacgagcat
aatggaggcattagcaggcatcttccagaccatactggatccggatcgatttccgaccgt
cacactgagtggaccaggacgaggttggaaaacggcactgatttatacagacattcaaaa
ccggataaagaacacttacgagaaaaacactactcgcacagttacaaggaatgctgtccc
gtagataacaggagcagtttttctggtgttagttctttcagaggctctacgaggcggaag
agcgatgaaaagagatgtgtagagcagaaacctcactacgcctgcatggaaggcaaactt
taa
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