Leucoraja erinaceus (little skate): 129706985
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Entry
129706985 CDS
T09122
Name
(RefSeq) RNA exonuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129706985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
leri03009
]
129706985
Ribosome biogenesis [BR:
leri03009
]
Eukaryotic type
Pre-60S particles
RNases
129706985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF1539
Motif
Other DBs
NCBI-GeneID:
129706985
NCBI-ProteinID:
XP_055507664
LinkDB
All DBs
Position
20:complement(25522348..25569970)
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AA seq
784 aa
AA seq
DB search
MANNTQTLGKCKRQDHENLEESKRKRIKVENETTESDKQHNQGMLKDGSIFSLNSKSNHC
AITYDQLRELINYVASTEERTPPSWCQIQGQNQTKVAVVVLRGVSQMHFYRYYLHFKQLR
KRFKWRFSMPPPPEDFLRRIFEIENSPSCGCDGSGEGAAPESCGSPVVNGHSLAAESESC
RSPAFANHPIIIKYGRKKQGLSKYLLSVEERIQNGFPVVGVRGYEGFVWSGCTTEVTDSS
PLFGLDCEMCLTRNGRELTRVSLVNAKGCCLMDELVKPSNPILNYLTKFSGITWEMLAPV
KTKLKDIQIRIKKILPPDAVLVGHSLNNDLKALQMIYPYVLDTSLLFVGDSGRKFKLKIL
VKNILGREIQSKEMSGHDPSEDAEGALQLAQYFINHGPEKIALMSLENFEPQQPLEDVIT
PQPEARSQRKSLPKQMCTGDRKAVLLGTKKAMELMIHQGAWHKIECETDKEVVQCTRINT
TAAILSLIHFTSYADYTESDLHMEINVGRQHEKMKQMLSEMCTVYAGPVCKDFCLKSVKR
AFRRCGSIRSFSITTETYQPYVRIQYEVPESALVAVETLNGSIVAERPIKVQRPMGEKSL
DCDTILKKLERDVTNQAVIYVAGIRQSLSMEDLTAKFSEFGHIEAVISVVNKTNAKNKDC
FIKYGNPESALKAQATMNGTEMKESKLNVQRALTPYHLQTWAAQGSYLAVSPSGAADTLQ
LSSQSSGSTTEELSQCEQEVKNVLRTLDRRVGRLVRGISSDTLCIILLPGINSDPCSVPG
LCLF
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataacactcagacactcgggaagtgcaaaagacaggatcatgagaatttagag
gaatccaagcggaagcgaatcaaggtcgaaaatgagaccaccgaaagtgacaaacagcat
aatcaaggaatgcttaaggatggttcaattttctctctaaattccaagagtaaccactgt
gccattacttatgaccaacttcgtgagctaataaattatgttgcatcgacagaggagaga
actccacccagttggtgccagattcaggggcagaatcaaactaaagtagcagtcgtagtt
ctacgtggtgtaagtcagatgcacttctacagatattatcttcactttaagcagctgaga
aaaaggtttaaatggagattcagcatgccccctcctcctgaagattttctgcgtcgtatt
tttgaaatagagaacagtccgtcatgtggatgcgatggaagtggtgaaggagctgctcct
gaatcttgtggcagtccggttgtgaacggtcattcccttgcagcggagagcgaaagttgt
agatctcctgcttttgcgaatcatcccatcattattaaatatggcagaaagaaacaagga
ctgagcaaatacttgctgagtgtagaagagcggattcagaatggctttcctgttgtaggc
gttcgaggttatgaaggcttcgtttggagtggatgcacaactgaagtaactgatagcagt
ccgttatttggcctagactgtgaaatgtgcctgactagaaacggaagggaattaacgcgt
gtctctttggtcaatgcaaaaggatgctgtttgatggatgagctggtgaagccaagcaac
ccgattctcaactacctcaccaagttctctggcattacgtgggaaatgcttgcacctgtg
aaaacaaaactgaaggatattcagatccggattaagaagatcttgccccctgatgctgtc
ctcgtggggcactccttaaacaatgatttgaaagcactgcaaatgatttatccatatgta
cttgacacatcactcctttttgtcggagattcgggtcgaaagtttaaattgaagatttta
gtaaaaaatatactgggaagggaaattcagtcaaaggaaatgagtggccacgatccatca
gaagatgcagaaggagctttgcagttggctcaatatttcattaaccatggacctgagaag
atagcgctgatgagtctggagaatttcgagcctcagcagccattggaagatgttatcacc
ccacagcctgaagccagaagtcagaggaaaagtttgccaaaacaaatgtgtacaggtgat
cgaaaagctgtgctattaggcacaaagaaagcaatggagttgatgatacaccaaggagcc
tggcataaaattgaatgcgaaacagacaaagaggttgttcagtgtactcggatcaatact
acagctgctatcctaagtttaattcactttacctcttatgctgactacactgaaagtgat
ctacatatggaaatcaatgtaggacgacaacatgaaaagatgaaacaaatgttatcggag
atgtgtacagtgtatgccgggccagtttgtaaggatttctgtttaaaatccgttaaaaga
gcgttcagaaggtgtggttccatccgttccttcagcattaccacggaaacataccagcct
tatgtgcggattcagtatgaggtgcctgaaagtgcactggttgctgtggaaacattgaat
ggaagcattgtggctgagcgccccattaaggttcaaaggcctatgggggaaaaatccctc
gattgtgacacaatcttaaagaaactggagagagacgtcacaaatcaagctgttatttat
gtggctggaattcgacaaagcctatcaatggaagacctgactgcgaaatttagtgaattt
ggacacattgaagctgtaatctcagtggttaataaaaccaatgcgaagaataaggattgt
tttatcaaatatggaaaccctgagagtgccctgaaggcccaagcaaccatgaatggaacg
gaaatgaaggaaagtaaattaaacgttcaaagagcactcactccttaccatcttcagacc
tgggctgctcagggatcttaccttgctgtgagccccagcggtgctgccgatactctgcaa
ctgagcagtcagtcctctgggagcacaacagaggaactttctcaatgtgagcaagaagtg
aaaaacgtgctacgaactctagatcgacgtgtgggacgactcgtcagaggaatatccagt
gacacactttgcatcatcctactgcctggaataaatagtgatccctgttcagtgcctgga
ctctgcctcttttaa
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