Leucoraja erinaceus (little skate): 129707115
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Entry
129707115 CDS
T09122
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
129707115 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129707115 (srebf1)
04131 Membrane trafficking [BR:
leri04131
]
129707115 (srebf1)
Transcription factors [BR:
leri03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
129707115 (srebf1)
Membrane trafficking [BR:
leri04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
129707115 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
129707115 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
129707115
NCBI-ProteinID:
XP_055507880
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All DBs
Position
20:complement(17045481..17089226)
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AA seq
1171 aa
AA seq
DB search
MNNVGHLQTLPDAGMMFEDSSMDNLDPSLPEGSEIDNALLSDIDDMLQLINNQDGEFSGL
FDNHFGTSTPLQDSSSSALALDSLLGNSSKTQIPVKMFQGPPLQQQLQLPQQSQLLQAPS
TQHVKQDAVQLQQGQQQQPLIMAQSFTASPQSQPQFVQQQQPLLGYQNSNGFTALQQGMP
TQQLQGLAVPQQMQPMTIQAQVQNISTQHLLTTATASSTPTVSAQLQQVPVLFQPQFIKA
DSLLLTALKPDGCTVVTSVNSSAITTLPTTTTPIQTTSLQMPTLVSGNTILTTVPLMVDA
DKLPINRILASGRPGNASMKGEKRTAHNAIEKRYRSSINDKIMELKDLVVGAEGKLNKSA
ILRKAVDHIRFLKQANQKLKQENMVLRLATQKNQSLKDIVASSGISLDTMTNGFKQEPDL
LSPPPSDAGSPPQNSPFSVSSSDSETDSPFFDDTKMSVKQEQTLPTSVGMLDRSRVVLCT
FVFLCLSFNPLASLMGGSDIRSMENEEYHGAGRSMLGLSVEVSSSWFSWLWPTLILWLIN
GIIVLIVFIKIFVYGEPVTRLHSESSVLFWRHRKQADLDLARGDFAQASQNLWICLKALG
RPLPTSNLDFACSLMWNVIRHILQRLWIGRWFAAQAGGFRRDQELKDDMKKCTEEAALVY
HKLQQLHMTGKLVGSYLTAINMALSAVNLAECAGDAISVATMAEMYVAAAIRIKISLHRR
LHFMTRIFLSSARQICLSQRGTIPPAMKWLCHPQGHRFFVDEDWTVKSTPKDSIYSVTGN
PGTRECRETHRGLGEFKGSTSIGALMAGEKKCRLWGPGLAEEAWYQGPSLIQVTQAFREH
LLEKALYCIAKPENSKPVTGEGGEFSDALEYLQLLNSCSDAAAITTQTFAIGSSMATVTG
TDPVTKWWASMIAVAINWLQGDDEAAERLYPMVECMPKPLHATESQLPRAALFAFKAVRA
ILGKQDGSQMSFLHCEKASGYLRDSLNMASSTCNTVDKAVQLLLCDLLLVTRTSVWQQQF
NGSQPMSGMHHASPLELRGFQQDLSSLRKLSQTFKPALRRVFLHEATARLMAGASPTRTH
QLLDRSLRRRVTNPMPKDGETETHPGRREHAEALLLACRYLPPSFLSAPGQRVGMLAEAA
HTLEKIGDKRTLHDCQQMIMKLGSGTTVTTS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgtggggcatctccagacactccctgacgcgggcatgatgttcgaggattct
tccatggacaacctggacccgtctctgcccgagggcagcgagatcgataatgcgctgctc
agtgacattgatgatatgttgcagctgattaacaaccaggatggagagttctctgggttg
tttgacaaccactttggcacgagcacccctttgcaagatagtagttcatcagccctagcc
cttgacagcctcttggggaatagcagtaagactcaaattcctgtgaaaatgttccaaggg
cctccgctccaacagcagcttcaacttccgcagcagtcacaacttcttcaagccccttct
acacaacacgtcaagcaagatgctgttcagttgcaacagggccagcaacagcagcctctc
atcatggcacagagttttacagcttctccacaatcacagcctcagtttgtgcaacaacag
cagcctttgctgggttatcaaaactccaatggatttacagcactacaacaggggatgccc
acacagcagctccagggtcttgcagttcctcagcagatgcagcccatgaccatccaggcc
caggtacagaatatttctacccagcatcttttaacaactgcaacagccagttctacacca
actgtttcagcacagctccagcaagtaccagtactcttccagcctcagttcattaaagct
gactccttgcttctgacggctttgaagccagatggatgtactgttgtgacatcagtaaac
tcctctgctataacaactttaccaacaaccactactcccattcaaactacatcccttcag
atgccgactcttgtcagtgggaacacaattttaaccacagtcccactgatggtagatgca
gacaagcttcccatcaatcgtatacttgcaagtggcagacctggcaatgcatcaatgaaa
ggggaaaaacgcacagcacacaatgccattgagaaacgttacaggtcgtctatcaatgac
aagattatggagctgaaagatcttgttgttggcgctgaaggaaagttgaacaagtcagca
atactcaggaaagctgttgatcatatccgcttcttgaaacaagccaatcagaagttgaaa
caagagaacatggtgttaagattggctacccaaaaaaaccagtctttgaaagacattgtg
gcttcctctggaataagtctggacacaatgacaaatgggttcaagcaggaacctgatcta
ctcagcccaccaccatctgatgccggttcaccacctcagaacagcccgttctctgtgagc
agcagtgattctgagacagacagcccgttttttgatgataccaagatgtctgttaaacaa
gagcaaacgctgcctaccagtgttggtatgttggatcgatccagggtagtactctgtacc
tttgtattcctttgcctttcttttaacccactggcgtcattgatgggtgggtcagacatc
aggtcaatggagaatgaagaatatcatggagcaggcagaagcatgctgggattatctgtg
gaagtttcttctagctggttttcctggctgtggccaacactgatcctatggttaattaat
gggataattgtcctgatcgtgttcattaagatctttgtctacggcgagccggtcacgagg
ctacactctgagtcgtctgtcttgttttggaggcaccgaaagcaggcggatctggaccta
gcaaggggagattttgcacaggcttcccagaacctctggatttgtttgaaagcgttgggg
cgccccctgccaacttccaatttagattttgcctgcagcctaatgtggaacgtcatccga
catattctgcagcgactgtggatcggccgctggtttgctgcacaggctggtggtttcaga
cgggaccaagagctgaaggacgacatgaagaaatgcactgaagaggctgcgctggtctat
cacaagctgcagcagcttcatatgactggcaaattggttggcagctacttaaccgcaatt
aacatggcattgagtgcagtaaaccttgctgaatgtgctggagatgctatctctgttgcc
actatggcagagatgtacgtggcagcagcaattcgtattaaaatcagcctgcacagaagg
ctccatttcatgacccgaatctttctgagcagtgccaggcagatctgtctgtcacagagg
ggaaccataccaccagctatgaaatggctgtgccatcctcagggccacaggttctttgtt
gatgaggactggactgttaaaagcaccccaaaagacagcatttatagtgttactggaaac
ccaggaactagagagtgcagggaaactcacaggggcctcggtgagtttaaaggaagtacc
agtatcggggcactgatggctggggaaaaaaagtgcagattatggggtcctggtttagca
gaggaagcatggtaccagggcccctcattgattcaggttactcaggctttccgagaacat
ctcctggagaaagcattatattgcattgccaaaccagagaacagcaagccggtgactgga
gagggaggagaattctcagatgctcttgagtacttacaactcctgaatagttgctctgat
gcggccgcaatcaccacacaaacctttgccatcggctctagtatggcaactgtcacaggc
acggatccagtcacaaagtggtgggcatccatgattgcggttgccatcaactggttgcaa
ggtgatgatgaggcagcagaacgtctgtatcctatggtggaatgcatgccaaaaccatta
catgcaacagagagtcaattgccaagggctgcgctgtttgcattcaaggctgtacgtgca
atattgggtaaacaggatggcagtcagatgagcttcttgcactgtgagaaggccagtggg
tacctgagggacagtctcaatatggcatcctccacatgcaacaccgttgataaggcagtg
cagctgttgctgtgtgatctcttgctcgtcaccaggaccagtgtatggcagcaacagttc
aatgggagtcagcccatgagtggcatgcatcacgcatccccgctagaactcagaggcttt
cagcaggaccttagcagtctcaggaagttgtctcagactttcaaacctgccctccgtagg
gtgttcctacatgaagcaacagccaggttaatggcaggagccagtccaacccgtactcac
caactgttagaccgcagtctcaggagacgggtcacaaacccaatgcccaaagatggcgag
acagagacgcaccctggcaggcgtgaacatgctgaagctctcctactagcgtgccgctat
cttccaccaagcttcttgtctgcaccgggccagcgagttggcatgctggcagaagcagcc
cacacactggaaaagattggtgacaaaaggactcttcatgactgtcagcagatgatcatg
aaactgggcagtggcaccacagtcaccacaagttga
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integrated database retrieval system
