Leucoraja erinaceus (little skate): 129707160
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Entry
129707160 CDS
T09122
Symbol
chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
leri03036
]
129707160 (chd6)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129707160 (chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
MUN
Motif
Other DBs
NCBI-GeneID:
129707160
NCBI-ProteinID:
XP_055507926
LinkDB
All DBs
Position
21:1313339..1500063
Genome browser
AA seq
2757 aa
AA seq
DB search
MACFLMGVDTALAYPGEVRYQPFTSKTSKQPLTPSASSVGEHAVQFSHTSTKDQPSPHSP
ASTPDAASYLVESSSKKVALCAQLDVSVDQPPPLTKAEDVGMGIKKKRKKKELKEDVSSE
MVTDAPKPKKKRKEPKCDKEPKEGKAAKEPKGSKGARNRGEPKEPKGTKGAKEPKEPKGA
KEPKQLKEPKCKSNATPKSKTSKKASKEQGPTPAEKKKKGKRKTAAPAENSEHKHSAEKT
PVATEELTDAQKRRSGRQVKRRKYNEDLDFKVVDDAGETIAVLGTGRISPSSGSSQKGNQ
TTESQEEDESAVIEKILAQRMLPKETPGASIEEVEEFYVKYRNYSYLHCKWATLEELQRD
KRIHQKIKRFRAKQAQMKNLFVEPDEEPFNPDYIEVDRILDVAHTIDSDTSEPVTHYLVK
WCSLPYEESTWELVEDIDPVKIQEYEELQIVPEISHVERPPADTWKKLELTRPYKADNNL
REYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLYEIYLMGIRGPFLIIAPLSTI
ANWEREFRTWTEVNVIVYHGSQISRQMIHQYEMHYKDSEGLPIQGIFKFNAIITTFEMIL
ADCPELRKIQWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNTVEELFSLL
NFLEPVHFPSESMFMEEFGDLKTNEQVKKLQAVLKPMMLRRLKDDVEKNLAPKEETIIEV
ELTNIQKKYYRAILERNFSFLAKGANQANMPNLLNTMMELRKCCNHPYLINGAEEKILDE
FREVHNPEAPYFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIH
RRYTYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDW
NPQNDLQAQARCHRIGQSKAVQVYRLITRNSYEREMFDKASLKLGLDRAVLQAMNRRGNT
NGVQPLSKIEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTRTITIESEGKGSTF
AKASFVASGNRTDISLDDPNFWQKWAKIAELDIESKNGKDSLVIDTPRVRKQTKHYNSFE
DDELMEFSELDSDSEDKPSRSRRLHDKTRRYLRAECFRVEKNLLIFGWGRWKDILSHGRF
KWHLTEKDMETVCRTLLVYCLKHYKGDEKIKSFIWDLITPTKDGQNQALHNHSGLSAPVP
RGRKGKKLKTPLSQPELKNADWMASCNPEVLFHDDGYKKHLKQHCNKVLLRVRMLYYLKQ
EVLGEAADKALDGVDASKLEVWMPEVDYNDIPVEWWDGDCDKSMLIGVYKHGYERYNAMR
ADPALCFLERVGMPDETSLAAEQGGVDLPADISEGVDLCKGDDSELKSDGQFKDQPDEDV
NSCIESGILEKGEDSILGQNGADMDRPQWPVASVLTARLRRLITAYQRCNRKELVRMESQ
ARNNRRRWYPQDEIWGRVSEMDIVTMEIQQRWTRREQTDFYRVVSTFGVVYDPDKKQFDW
NQFRSFARLERKTDGSLERYFRSFVAMCRNVCRLPQRKEEASDPSIFVEPITEERASRTL
YRIELLRKVREQVLRSPQLSERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLSRTDYY
ILNDPQLSFREAHRNYVQNGNTYFQTVPAPCSQSSLNFSQSASPASTVLTLGEKDNIEQM
DAEQEKLEEVLDVPSPSAGTLRDCAEVKNEEGAADPVNKCSAAQSSLSLSEAVAAGNEWG
AVNCTQTKFYPMPTTHVKSEETNAVDGMCAEGDGEEGLLKPVLESCSRGETMFQRNLQPV
CVAAASPINCLNLLLVQSNGVLEVPSVPEEMMDSSAPVCGVQPVDPVPGAVPPCHLVHDK
QVKAENESSMEVSGGESPIGEHVYDLQANCPGVCLTQTTANSSNRPWNRASQLAESNSPV
TAPVSPQATNGLKLTEAVAGTDQQGVAVNETCSAETEELVAFTNAESDHPPFVKVAVQSL
TSTPSLGTAYSLMKTVQAEPDPSSAHDGIVPIKRELTIRHLLEDCMKDDLCKTEEKSEED
NSQPEVIPLKSFDEESNTSASLVQDEIQDTLLQDIREPTIAQLLQEKTLYSSAEWPKDRV
IINRIDNICHAVLKGKWPSAQQQNLEAAGVMYSMAAPADSLNVRSCLSVPVQAAHTLSFA
DGSVSSHQFSKESLLALTFPRDQRRRRRKYEFETDRGAKRKSQEEAASILTHPPIILNGW
QETAMDLSKAAEEVPGSVPVIISASTPRLSSLDPSAAFRADMAGILQAGLVHPVTGQVIN
GAYRGEDTSRRKRGRRKNVEGVDILFMKEKKPEMLVGFKESGLSKQLFSGVAHSTDNMAG
MMIKLPQGKQQLGNEEEEKNKSLIEWLRQHPTYTMDVSNLAPNCTAILHSLSERPKQRRH
RCKDPSKLDINSLTGEERVPVVHKGSGRKLGGAMAPLLKELATWLDANPEYAVAPEWAEI
VKHSGFLPENKFGRILTEPVVKETGARKRGRRPRSEMVKPGVLMGDTTSAMGPMFMNGLI
AGMDLVSLQNLRNIHNLQLAGLMGFPAGFAAIPSGEDGKNSLNMLPMMLPGMAGMSHVFG
VGGLLNSPSMMSNTSTSCTSTLTTSVSSKANKGSEQHSGAAESRKHEDGSLSGEKPGPSS
SFPDSGEARVTTSNALPINPFLLHSMPAGLIYPSMFLPHGVGMAMPGFAHSEGDTTGSPK
KKRKKAKDEAATEGTEPCPQLINVEESMRNSTDFTAVQDSSVQETQKNSVDGTQNAE
NT seq
8274 nt
NT seq
+upstream
nt +downstream
nt
atggcctgctttttaatgggggtcgacactgctctagcttaccccggtgaggttagatat
cagcctttcacttcaaagacctccaagcagcctctgacacccagtgcctcatctgtcggt
gaacacgcagtccagttctcgcacaccagcaccaaggaccaaccaagcccacacagtcca
gccagcactccagatgctgccagttacctggttgagagcagcagcaaaaaagttgcactt
tgtgcacagttggatgtgagtgtggaccaaccaccgccgctcaccaaggccgaggatgtc
ggtatggggattaagaaaaagagaaagaaaaaagaactaaaggaggatgtcagcagtgaa
atggtaaccgatgcacccaaaccaaagaagaagagaaaagagcctaagtgtgataaggaa
ccgaaagagggcaaagctgcaaaagagcctaagggctcaaaaggagcaaggaaccgtggg
gaacctaaggaacctaaaggtaccaagggggccaaagagccgaaggaacctaagggtgcc
aaggaacccaagcagctgaaagagccaaaatgtaaatctaacgctacacccaaaagcaag
accagcaagaaagccagcaaagaacaaggcccaacaccagctgaaaagaagaagaaaggg
aaaaggaaaactgctgctccggcagagaattctgaacataagcattcggcggaaaagaca
cctgtggccacagaggagctgacagatgcacagaagcgacgatcaggccgtcaagtaaaa
cgaaggaagtacaatgaagacttggacttcaaagttgtcgatgatgccggtgaaacaatt
gctgtactgggaacagggcggatttctccgagctctgggtcctcacagaaaggaaatcag
acgacggaaagtcaggaggaggacgagtctgctgtcattgagaagatcctggctcagcga
atgttaccgaaagagacccctggtgcgagcatagaggaagtcgaagaattttacgtcaaa
tacaggaattactcatacctgcattgtaaatgggccacattggaggagctgcaaagggat
aaaaggattcaccagaagatcaagcgtttcagagccaagcaggctcagatgaagaacctt
tttgttgagcctgatgaagagccctttaatccggattacatagaggttgatcggatcttg
gacgtcgcacataccatagactctgacacttcagagcctgtgactcattacttggtgaag
tggtgctctctaccctacgaagaaagcacttgggagctagtggaagacatcgaccccgta
aagattcaggaatatgaggagttgcagattgtgcctgaaatctcacatgtggagcggcct
cctgctgacacatggaagaaactggagctgacacggccgtacaaagcggacaataacctc
agggaataccagctggagggaatgaactggctgctgttcaactggtacaacagaaaaaat
tgcatcctggcggatgaaatgggtctggggaagacaatccaatcaattacatttctgtat
gaaatatacttgatgggaatccggggccctttcctcattattgcacctctctccacaata
gccaactgggagcgggagttccgcacatggacggaggtaaatgtcatcgtgtaccacggc
agtcagatcagccgccagatgatccaccagtatgaaatgcactacaaagattctgagggc
ctccccatccagggcattttcaagtttaatgcaataattaccacttttgaaatgattttg
gctgactgccctgagctgcgaaaaatccagtggagttgtgtgatcatcgatgaggcccat
aggctgaagaacaggaactgtaaactgctggagggtctcaagctcatggctttggaacat
aaagttctactgactggaacccctttgcagaatacagtggaagagctattcagcttatta
aattttcttgaacccgttcactttccttctgagtccatgttcatggaggagtttggagac
ctgaagaccaatgagcaggtgaagaagctacaagcagtattgaaacccatgatgcttcga
agactgaaagatgatgtggagaaaaatctggctccaaaggaggagaccatcattgaggtg
gaactgactaacatccagaaaaagtattacagggccatcctggagaggaacttctctttc
ttggctaaaggagctaaccaggctaacatgccaaacctgctgaataccatgatggaactg
agaaaatgctgtaaccatccctacttgatcaatggtgctgaggagaaaatcctggatgag
ttccgtgaagtgcacaatcctgaggctccttatttccaactgcaggccatgatccaggct
gcaggaaagttggtgctgatcgacaagctgttgcccaaactgatagcaggtgggcacaaa
gtgctgatcttctctcagatggttcgctgcttggatatacttgaagattatctcatccac
cgacggtacacctatgagcggatcgatggcagggtacgggggaacttgagacaggctgcc
attgatcgcttctccaaaccagactcggaccgctttgtgtttctgctgtgcaccagggca
ggaggtcttggtattaatcttactgctgcagacacttgtatcatctttgattcggattgg
aacccacagaacgacctgcaggctcaggctcgttgtcaccggataggacagagtaaagca
gttcaagtgtatcgcctcataacccgtaactcgtacgagcgagagatgttcgacaaggcc
agcctcaagctgggtctagacagagcagtcttgcaagcaatgaaccgcagaggaaacacc
aacggggtgcagccattgtccaagattgaagtagaggatcttcttcgtaaaggagcatat
ggagccctaatggatgaggaggatgaaggatcaaagttttgtgaagaagacattgaccag
atcttgcttcggcgaactcgcacaatcaccattgaatcagaagggaagggttcaacattt
gcaaaggccagttttgtagcttcgggcaataggacggacatctccctggatgaccccaac
ttttggcaaaaatgggccaaaattgcagagctggatatagagtcaaagaacggcaaggac
agtttggtcatcgacacaccacgtgtcaggaaacagaccaaacactacaattcgtttgag
gatgatgaattgatggagttctctgagcttgacagtgatagtgaagataaaccttcaagg
tctcgccgtctccacgacaagacacggcggtatctccgggccgaatgctttcgggtggaa
aagaacctgttgatattcgggtgggggcgatggaaggacatcctgtcgcatggacgcttc
aaatggcacttgacagagaaggacatggagaccgtttgtcgcaccctcctggtctattgc
ctgaagcattacaaaggagacgagaagattaaaagtttcatctgggaccttatcactcct
acaaaagatggacagaatcaagcactgcacaatcactcagggttgtcagctcctgtgccc
aggggcaggaaaggcaagaagctgaaaaccccactgtcccaaccagagctgaagaacgct
gactggatggccagctgtaacccagaggtgcttttccatgatgatggctataagaaacat
ctcaaacagcactgcaacaaggtcttgctgagagtccgaatgttatattatctcaagcag
gaggtgctgggggaggccgctgacaaagctttggatggtgttgatgcaagtaagctggaa
gtctggatgcctgaggttgactacaatgatatcccagttgaatggtgggatggagattgt
gacaagtccatgctcattggagtttacaaacatggttatgagcgatataatgcgatgaga
gctgacccagcactctgcttccttgagagggtgggcatgcctgatgagacctcactggca
gccgagcaaggaggtgttgacctgccagcagacataagcgaaggggttgacctttgtaaa
ggtgatgactccgagttgaagtctgatggccagttcaaagatcagccagatgaagatgta
aattcctgcattgaatctgggattttggagaaaggggaagactcaattttaggtcagaat
ggtgcagacatggaccgtccccagtggccggtggcttcagtgctcacagctcgtcttcgt
cgcctcataaccgcctaccaacgctgcaatcgcaaggagctggtgagaatggagtcgcag
gcgcgcaataaccggcgtcgctggtatccacaggatgagatctggggaagggtgtcagaa
atggacattgttaccatggaaatccagcaaaggtggacaaggagggaacagacagatttc
taccgtgtggtctcgacgttcggtgtggtgtatgatccagacaagaagcagtttgactgg
aaccagttccgcagctttgccaggttggagagaaaaacggatggaagcctagagaggtat
ttccgaagcttcgtggccatgtgccggaatgtttgcaggctgcctcagaggaaagaagag
gcttcagatccaagcatttttgtggagcccatcacggaggaacgagcttcgcggactctg
taccggatagagttgctgcgcaaggttcgtgagcaagttctgcggagcccgcagctgagc
gagcggctgaagctgtgccgccccagcctgtacctgccggtgtggtgggaatgcggtaaa
catgaccgtgacttgctcataggcactgccaagcacggcctcagcaggacggactactac
atcctcaacgaccctcagctttccttccgcgaggctcacaggaactacgtacagaacggg
aacacctacttccagacagtgccggctccttgcagccagtcctccctcaatttcagccag
tctgcttctcctgcctccactgtgctcactctgggggagaaggacaacattgagcagatg
gacgcggagcaggagaagctggaggaggttttggatgtgccgagcccctcggcaggaacg
ctcagagactgtgccgaagtgaagaatgaagagggtgcagctgaccctgtaaacaagtgc
agcgctgctcaatctagtctcagtctgtctgaggcagtggctgcagggaacgaatgggga
gctgtcaactgcacacagaccaagttttaccctatgccaacaacacacgtcaaatctgaa
gagacgaatgccgtggacggaatgtgtgcagagggtgatggcgaggaaggtttactgaag
cctgtgctggaatcttgcagccgtggagaaaccatgttccagagaaatctacagcctgtg
tgtgttgctgctgcctcaccaataaactgtctgaacttgctgctggtacaatccaatggt
gtgttggaagtgccgtctgtaccagaggagatgatggatagttcggcaccagtgtgtggt
gtgcagcctgtggacccggtgcctggtgccgtccctccgtgtcaccttgtgcacgacaag
caggttaaagctgagaatgagagctcgatggaagtcagtggtggggagagccccataggt
gaacacgtttatgatctgcaggctaactgcccgggcgtgtgcctcacacagaccacagcc
aatagttccaatagaccatggaatagagccagccagctggctgagtccaactctccagtt
actgcacctgtaagtccacaagccaccaatgggttgaagctgactgaagctgtggcgggc
acagaccagcaaggtgtggctgtgaatgagacctgttcagcagaaacggaggagctcgtg
gcctttacaaatgctgaatcagaccatcctccgttcgtgaaggtagccgtgcaaagccta
acgagcactccgtcgctcggaactgcttactcgttaatgaagacggtgcaggctgagcca
gatccatcctcagcccatgatggcatcgttcccataaagcgggagctgacaatcaggcac
ctcctcgaggactgcatgaaggatgatctctgtaaaacagaagagaaatccgaggaagat
aattcacaacctgaagttatcccgctgaagagttttgatgaggagagcaacacatctgcc
agcctggtccaagatgagatccaggacaccctcctgcaggacatccgcgagccaaccatc
gcacaactgctgcaggagaaaacactctactcgtctgctgagtggcccaaggatcgagtt
atcataaaccgcatcgacaacatctgccacgctgtgctgaaaggaaaatggccatcagca
caacagcagaacctggaagctgctggtgtaatgtactccatggctgccccagcagacagt
ctgaacgtgaggagctgcctcagtgtccctgtgcaggctgcacacactctcagctttgct
gacggctctgtctcctcccatcaattttcaaaggagagcctacttgcattaacgttcccg
agggatcagaggaggagaaggcggaagtatgagtttgagacagatcgaggtgcaaagagg
aagagccaggaggaggctgcctccatcctcactcatccgcctatcattttgaatggatgg
caggagactgccatggacctttccaaggcagcggaagaggtgcctggctctgtgccagtc
atcatcagtgcgagcacccccaggctgagctcgctggacccctcggctgctttcagagca
gatatggccgggatcctgcaggcaggcctcgtccatcccgtcacaggtcaggtgatcaac
ggcgcctacagaggagaagacacctcgcgcagaaagagaggacggaggaagaacgtcgaa
ggtgttgatatcctcttcatgaaggagaagaaaccagagatgttggtaggtttcaaggag
agcggtctgtcgaagcagcttttctctggggtagctcactccaccgacaacatggccggc
atgatgattaaactgcctcagggcaagcagcaactgggaaacgaggaggaagagaaaaac
aagagtctgattgagtggctaaggcagcatcccacctacaccatggatgtgtccaacctg
gctcccaattgcacggctattttacacagcctttcggagcgaccaaaacaaaggaggcat
cgctgcaaggatcctagtaaactggacatcaactcgctgactggggaggaaagggtgcct
gtcgtgcataagggaagtggaaggaagctggggggcgcgatggcaccgttgctgaaggag
ctggcaacatggctggacgcaaacccagagtacgctgtcgcacccgagtgggcggaaatc
gtgaaacactcgggctttctaccggagaacaagtttggccgcatcttgacggagcccgtg
gtgaaagagacgggtgccaggaagcggggaaggagaccgcggagtgagatggtcaaacct
ggcgtccttatgggtgacaccacctcggcaatgggaccaatgttcatgaacgggctcatc
gctgggatggatctcgtgagccttcagaacctgagaaacattcataaccttcagctggcc
gggttgatgggattcccagcgggatttgctgctatcccctcgggagaggatggcaagaac
agcctgaacatgttgcctatgatgctccctgggatggctgggatgtcgcacgtgtttggc
gtagggggattgttgaacagcccatcgatgatgtcaaataccagcacttcatgtacgtct
acgttgacgacaagtgtttcctctaaagcaaataaaggcagcgaacagcacagtggtgct
gccgagtcaaggaaacacgaggatggatctttgtcaggggagaaaccaggtccgagttca
tctttccctgactctggagaagccagagtcaccaccagcaatgcgttacccatcaaccca
ttcctgctgcacagtatgcctgctggattaatatacccttccatgttccttccgcacggt
gttggcatggcaatgcctggctttgcacactctgagggagacaccactggaagcccaaag
aagaagaggaagaaagccaaggacgaggctgcaactgagggaactgaaccctgcccacag
ctcataaacgttgaggagagcatgagaaattcaacagacttcactgccgtacaggacagt
tctgtgcaggaaactcagaaaaactctgtagatggtacccagaatgccgagtag
DBGET
integrated database retrieval system
