Leucoraja erinaceus (little skate): 129707163
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Entry
129707163 CDS
T09122
Symbol
rbl1
Name
(RefSeq) LOW QUALITY PROTEIN: retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04110
Cell cycle
leri04218
Cellular senescence
leri04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129707163 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129707163 (rbl1)
04218 Cellular senescence
129707163 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129707163 (rbl1)
Transcription factors [BR:
leri03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
129707163 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
TFIIB
Motif
Other DBs
NCBI-GeneID:
129707163
NCBI-ProteinID:
XP_055507938
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All DBs
Position
21:1501959..1561471
Genome browser
AA seq
1093 aa
AA seq
DB search
MPSGEERKASESFDKLCQDLNLDPETGAEAWGSFQRIGSTYTLEGETLHWLACALYVACR
KSITPTVGKGTMEGNGVSLTRILRSSKLSLIQFFSKMKKWTDMANLSQDFRKRVEQLERN
FEVSTVIFRKFEPIFLDMFQNRHQDPPRLQRSRKQRRLPCSVRDAFSFCWTLFVYIKGNF
RMIGDDLVNSYHLLLCCLDLVFGNALLCPNRKDLLNQGFEGLPPGFGSQDYKPPVHPPCI
IEKLCDLHDGLIVEAKGIKEHYWKPYIKKLFERKILKGNSELFADLLDVSNFTDNNKAVN
REYEEYVLTVGDFDERIFLGDDADEEIGTPRKATADIPVGNLSARMQVECNLQQHFEKTR
SLAPSTPLTGRRYLKEKEPVVTPVSSATQSVSRLQTMVMGLKNTPSEHLLQIFNSCSRNP
IEAVSARVKEIGDIFCQHYSQPTENQAGSHIDFAIKRWRLAEILYWKILETVMVQESRRN
PGKDMTVLLEQDIFHCSLMACCQEIVLSSYSSQRTFPWIIDILNLSPFYFYKVIEVLIRA
EEGLSRGIVKHLNNIEEQILESRAWTHDSALWKALHGVDNKVPTCEEVTFPSNFESGNSG
PTHLPLMSMSPIVHPRVKEVRTDIAGSFNKRELPPPASPLSVHDRFTSPSAGSAKRRLFG
DDCSMDARVTIAQNKINVTQLSGRSIIQTQSTTNENITLAPGQTVVTMATATVTTTNGQM
LTIPVQGVTYETGGIAFIPMQMSVPRQAQVAEDTAQVPLSAQALINSSPKGVGGASVQEP
QLTAVVKPKKTGSLALFFRKVYHLASVRLRDLCLKLDVSAELRRKIWTCFEYSLVHCTDL
MTNRHLDQLLLCAVYIMAKITKEDRSFTDIMKCYRSQPQASSHVYRSVLLDGKGSKSADV
TENAGGDGSMECQVSDCDPSITNNSQHPVETSISAVTATSLSRSLDAVEEERGDLIKFYN
TIYVTRIKEFALKYSNVKLECGVEAPPLSPFPNVKPHPVSPRRISQQHAVYISPHKNGTS
LTPRTAMMYRFNRSPSKNLRDINCMIKQGERLSRKRAFTMESDSESPTKYLCQENDDILL
KRLQDVVSERANR
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcggcgaggagcggaaggccagcgagagcttcgacaaactctgccaggacttg
aacctggacccggagacgggcgccgaggcttggggcagcttccagcgcatcggcagcacc
tacaccctggagggagaaactctacattggctggcttgtgctctatatgtggcatgtcga
aaaagcatcaccccaactgtcggcaaggggacgatggaagggaatggtgtttcgttgaca
agaattcttcgctcgtcaaagttaagcctaattcaattcttcagcaagatgaagaaatgg
accgatatggcaaacttatcccaagacttccgaaagcgagtagagcagttggaaaggaat
tttgaagtttcaactgttatattcaggaaatttgagcctatctttttggatatgtttcaa
aatcgtcaccaggatccgccccggcttcagcgaagcagaaaacagaggcgccttccatgc
agtgtaagagatgcttttagtttttgctggaccttattcgtatacattaaaggaaacttc
cgtatgattggtgatgaccttgtaaattcttaccaccttttgctctgctgcttggacctc
gtgtttggaaatgcattattgtgccctaacagaaaagatttacttaaccaaggatttgaa
ggtttgccaccggggtttggcagccaggactataagcctcctgtacatccaccgtgtatc
attgagaaactatgtgatttgcatgatgggctcatagtagaagcaaaaggtatcaaggag
cactactggaaaccttacattaagaaattatttgaaaggaagattctaaaaggaaacagt
gagctatttgccgatcttctggatgttagcaatttcacagacaacaacaaagcagtaaac
agagaatatgaagaatacgttttgacagtgggtgattttgatgaacggatatttttggga
gacgatgctgatgaggaaatagggacacctcgtaaagctacagcagatattccagttggc
aacctatcagcacgaatgcaagttgagtgcaacctgcaacaacactttgaaaagacaaga
tctttggcaccatcaactccattgacaggaagacgctacttgaaagaaaaggagcctgtt
gtgacaccagtatcctcagcaacgcagagtgtaagtcgtttgcagaccatggtaatggga
ctgaagaatactccaagcgagcatctgctgcaaatcttcaactcctgttcacgaaatcca
attgaggccgtatcagcccgggtcaaggagattggtgatatcttctgccagcactactcc
cagcctacagaaaaccaggctggttctcatatagattttgccatcaagcggtggcggctt
gctgaaatcctgtattggaagatcctggagaccgtgatggtgcaggaaagtcgacgaaac
cctgggaaggacatgactgtgttgctggagcaggatatcttccattgctccctgatggct
tgctgccaggagatcgtcctctcctcctacagttcccagcgcacgttcccatggattatt
gacatcctcaacctgagtcccttttatttttacaaggttatcgaggtgttgattcgggca
gaggagggtctatcacgaggcatagtgaagcacctgaacaacatcgaagagcagatcttg
gagagtcgagcttggacacacgattcagccctctggaaggctttacatggagtggacaat
aaggttcccacttgtgaggaggtgacgtttccttccaattttgaaagtggtaatagtggt
cccacccacctgccactgatgtccatgtcacctatagtccatcctcgggtgaaggaagtc
cgcacagatattgctgggagtttcaacaaacgtgaacttcctcctccagcatcgccgctc
tctgtccacgatcggttcacctctccctctgcgggaagtgccaagaggaggctcttcggg
gatgattgttcaatggatgctcgcgtgactattgcacagaataagattaatgtcacccag
ttatctggacggagtattattcaaacccaaagcaccaccaatgaaaacattactctcgct
cctggtcagactgttgtaaccatggcaactgctactgtaaccaccaccaatggtcagatg
ctcactatacccgtgcaaggagttacgtatgagactggagggatcgccttcatccccatg
cagatgagcgtcccccggcaagcacaggttgcagaagacacagcccaggtgcccctgtct
gcccaggccttaatcaactcttcccccaagggagtgggaggtgcatcggtgcaagagcct
cagctcacagcagtcgttaagccaaagaaaactggctccctggcattattcttcagaaag
gtgtatcatttggccagcgtccgtctgcgtgacctgtgtctaaaactggatgtgtccgca
gagctccggagaaagatatggacttgctttgagtattctttggtccattgcacagatttg
atgacaaataggcaccttgatcaacttctcctttgtgctgtctacataatggcaaagatt
actaaggaagacaggtctttcacagatatcatgaagtgttacagaagccagccacaagcc
agcagccatgtgtacagaagtgttctgctggatggtaaaggatccaagagtgctgatgtt
actgagaatgcagggggagatggaagcatggaatgccaagtgtccgactgtgatcccagc
ataacaaacaacagtcagcatcccgttgagacaagcatctctgcggtgactgcaaccagc
ttgtccaggagtctagatgctgtggaggaggaacggggtgacctcattaagttctataac
actatctatgtgactagaattaaagagtttgcactgaagtactccaatgtaaaactggag
tgtggggtggaagccccacccctctcgccctttccaaacgttaagcctcaccctgtatct
ccccggcggatatctcaacagcatgcagtatatatctcccctcataagaatggcacttcc
ctcactccacgtaccgcaatgatgtacaggtttaacagaagcccctcaaagaacctgcgg
gatatcaactgcatgatcaaacagggggagcggctgagcagaaaacgagcgttcaccatg
gagagtgacagcgagtcgccgactaaatatctctgccaagaaaacgacgacattttgttg
aaaaggttgcaggatgttgtcagcgaacgggcaaaccgctga
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