Leucoraja erinacea (little skate): 129707179
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Entry
129707179 CDS
T09122
Name
(RefSeq) AP-1 complex subunit gamma-1-like
KO
K12391
AP-1 complex subunit gamma-1
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129707179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129707179
Membrane trafficking [BR:
leri04131
]
Endosome - Golgi transport
Others
AP-1 complex
129707179
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
Peptidase_M73
DUF5609
V-ATPase_H_N
Motif
Other DBs
NCBI-GeneID:
129707179
NCBI-ProteinID:
XP_055507960
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All DBs
Position
21:5662725..5760662
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AA seq
814 aa
AA seq
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MPAPVRLRELIRTIRAARTQAEERDVIQKECALIRSSFREEDNTYRCRNVAKLIYMHMLG
YPAHFGQLECLKLIASQRFTDKRIGYLGAMLLLDERQDVHLLMTNCLKNDLNHSTQFVQG
LSLCTLGCMGSSDMCRDLAGEVEKLLKNSNSYIRKKAALAAVHVIRKVPELLEMFLPATK
NLLNDKNHGVLHAAVVLVIEMCKHSPDTHTYFRKVVPQLVKSLKNLIMSGYSPEHDVSGI
SDPFLQVQILRLLRMLGKSDDEASEQMNDILAQVATNTETSKNVGNAILYETVLTVMDIK
SESGLRVLAVNILGRFLLNNDKNIRYVALTSLLKMVQTDHNAVQRHRSTIVDCLTDLDVS
IKRRAMDLCFALVNGSNVRGMMKELLYFLDHCDPEFKADCASGIFLAAEKYAPNKRWHID
TIMRVLTTAGSYVRDDSVPLLIQLISNANSLHAYIVQKLHQAIRVDISQQPLVQVAVWCV
GEYGDLLLSGEFEEETPVQVTEDEVLDVLEKILHSSLSALSTREYALTAIMKLSTRLQSS
TNRIRKAVSIYGSSLDVELQQRAVEYSALFMRFDHMRPALLERMPLIQKTGTNGPMNATL
HGDEKEEGGNLPAQEQLSQQAQVNNLLDLLDDSKPTVSLPEASKVHQARGELLDLLDGLN
MPDLQSSGLSAGQPQLLPDGIAPPSFQNASNSKQGIPSITAFNQNGLKIEFSFERSKANP
NMLFITLCASNSTEMDMSNFVLQAAVPKSFQLQLMSPSGSIIPAKNSGAITQLMRVLNSQ
KHPLRMRLKLMYNHKEVPFEVMTDVNEFPTQAWE
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgccagctcctgttcgattgcgagaactaattcgcacaatccgtgctgccagaacacaa
gcagaagaacgagacgtaattcagaaagaatgtgcacttatcagatcatccttcagagag
gaagacaacacatatcgttgccgaaatgtagcaaaactcatctacatgcatatgcttggg
tacccagcgcactttggccagctggaatgtttaaagctaatagcatcacagagattcaca
gacaagcgaattggctaccttggagcaatgctgttactagatgagagacaagatgtccat
ctactgatgacaaactgccttaagaacgatttgaatcacagcacgcaatttgtccagggc
ctctctctttgtacactgggctgcatgggatcatcagatatgtgcagagatctggctgga
gaagtggagaaactactgaaaaattccaattcttacattcgtaaaaaggctgcactggct
gctgtacatgttataaggaaagtaccagagctgctggaaatgtttctacctgctacaaaa
aaccttcttaatgataagaaccatggtgtcctccatgctgctgttgtccttgtcatagaa
atgtgtaaacatagccctgacacacacacttattttcgcaaggttgttccacaactggtc
aaatccctgaagaatctaataatgtcgggttactcaccggaacatgatgtgtctggaatt
agtgacccattccttcaggtgcagattttaaggttgttgagaatgctggggaaaagtgat
gacgaagctagtgaacaaatgaatgatattctcgctcaggtggcaaccaacactgaaacc
agtaaaaatgtaggcaatgccattttatatgaaacggtgttaacagtgatggatatcaag
tctgaaagtgggttaagggttctagctgtaaatattttgggtagatttttactaaacaat
gataaaaatattaggtatgttgcattgacgtcacttttgaagatggtgcagacagaccac
aatgcagtacagagacaccggagtacgatcgtagactgtcttactgacctcgatgtctcc
attaaaagacgtgcgatggatttgtgctttgccctggttaatggcagcaatgtccgagga
atgatgaaagaattactctattttctggaccactgtgacccagagtttaaggcagactgt
gcttcaggaatattcctcgcagcagaaaaatacgctccaaacaaacgatggcacattgac
accatcatgagagttctcaccacagctggaagttatgttcgagacgactcggtgcctctg
ttgattcaactcatcagtaatgcaaactcccttcatgcatacattgtgcagaagctccac
caggccattcgtgtggatatttcacagcaacctcttgtgcaagttgcagtgtggtgtgtt
ggagaatatggggatcttcttttgtcgggggagtttgaggaggaaacaccagttcaggtt
acagaagatgaggtgttggatgttttggaaaaaattctgcactccagcctctcagcactg
tcaacccgtgaatatgctctaactgccattatgaagcttagcacacgactgcagagcagc
acaaatcgcatcagaaaggcagtttctatctatggaagcagcttggacgttgagcttcaa
cagcgagcagtggagtacagtgcactcttcatgaggttcgaccacatgagaccagcttta
ctggagcgcatgcctctcattcaaaagactggtaccaatggacctatgaatgctacgctt
catggtgatgaaaaggaggaaggggggaacttaccagcacaagagcagctgtcccagcaa
gcccaggttaacaatttgttggatctgcttgatgacagcaagccaactgtatcactgcct
gaagcaagcaaagtacatcaagcaaggggagagctgctagatcttttagatgggttgaac
atgccagatttgcagtcatcaggtctgtcagctgggcagccacaattacttccagatggc
attgctcctcccagttttcagaatgcttccaattcaaagcaaggtattccttccatcacc
gccttcaatcaaaatgggctgaaaatagagttttcttttgaacgttccaaagcaaaccct
aatatgctgttcattaccctgtgcgcatcaaattccactgagatggatatgagcaacttt
gttttgcaagctgctgtaccaaagtctttccaacttcaattgatgtctcccagtggcagc
atcattcctgctaagaattctggagcaatcacacagctgatgagagttctcaactcccaa
aagcacccattgaggatgagactgaagctaatgtacaatcacaaggaagtaccgtttgaa
gtaatgacagacgtcaatgaattcccgacccaagcctgggaatga
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