Leucoraja erinacea (little skate): 129707194
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Entry
129707194 CDS
T09122
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D isoform X1
KO
K15181
negative elongation factor C/D
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129707194 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leri03021
]
129707194 (nelfcd)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
129707194 (nelfcd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
129707194
NCBI-ProteinID:
XP_055507992
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All DBs
Position
21:6669973..6724356
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AA seq
629 aa
AA seq
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MALRREVSLSCRRPGFPPRRLFTPGPMGESSGRSGGSAGAGGGLRAKGISDEYFGSAADW
EEQDGSMHDEDDGDGEDDAEVQQECLQKFSSRDYIMEPPIFNTLKRYFQAGGSPEHVIQM
LSENYTAVAQTVNLLAEWLIQTAGVEPSHVQETVENHLKSLLIKHFDPRKADSIFTEEGE
TPAWLEQMIAHVTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVSTACQQLEVF
SRVLRTSLATLVDGGEEHLEKNLPEFAKMVCHGEHTYLYAQSIMSVLAQEEQGGAAVRRI
AQEVQRYAHEKGHDASQITLALGTAASYPRACQALGAMLSKGALNPADITVLYKMFTSMD
PPPVELIRVPAFLDLFMQSLFKPGSKINPEHKHKYIYILAYAASVVESWKKNKRFNINKD
ELKSTSKAIETVHNLCCNENKGASELVAELGTLYQCIRFPVVAMGVLKWVDWTVSESSYF
QLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVMEQLELKKTLLDRMV
HLLSRGYVLPVVSYMRKCLEKLNTDISLIRYFVTEVLDVIAAPYTSDFVHLFLPILENDS
IVGTIKTEGECDAVAEFIAHCKSNFIMMN
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgccgggaggtcagcctctcctgccgcaggcccggtttccctccgcggcgt
ctgtttactccgggacccatgggcgagagcagtggacggagtggcggtagcgccggcgct
ggcggcggcctccgggccaaggggataagcgatgagtacttcgggagcgcggcggactgg
gaagaacaggatggctccatgcacgatgaagacgatggggacggtgaagatgatgcggag
gtgcagcaggaatgcctgcagaagttctccagtcgagattacataatggagccacctatt
ttcaacacattgaaaagatatttccaggccgggggctctccagagcatgtgatccaaatg
ctgtctgagaattacacggcagtagcacagactgtaaatctgctggcagagtggcttatc
cagacagcaggggtggaaccatcacatgtacaggaaactgtggagaaccatttgaagagt
ttgctcattaagcactttgatcctcggaaagccgattccattttcacagaggagggggag
acaccagcttggctagaacaaatgattgctcatgtaacttggagagacctcttttataaa
ctggcagaagctcaccccgactgcttgatgctcaattttactgttaagctaatttcagac
gctggataccagggtgaaataaccagcgtgtcaacggcctgccagcagctcgaggtcttc
tcccgtgttctccgcacctctcttgccacacttgttgatgggggtgaagaacatttggag
aaaaacctgcctgaatttgcaaaaatggtatgtcacggggagcatacatacctttacgct
cagtctataatgtctgtgttggctcaagaagaacaaggtggggcagctgtccgaagaatt
gcacaggaagttcagagatatgcacatgagaaaggtcatgatgccagtcagattaccctg
gcgttaggcacagctgcatcctacccccgagcttgtcaggcactgggtgccatgctgtcc
aaaggagctctgaatcctgctgatatcacagtgttatataaaatgttcaccagcatggat
ccaccgcctgtagaattgattagagtcccggctttccttgatctttttatgcaatctctc
ttcaaaccgggctccaaaatcaatcccgagcataagcacaagtacatctacatcttagct
tatgcagccagtgtggtggaatcgtggaaaaagaacaaaagatttaacatcaacaaagat
gagctgaaatccacctcaaaggcaattgagaccgtccacaatctgtgctgcaatgaaaac
aaaggggcttcagagctggttgctgagttgggaacgctttatcaatgtattcggtttccg
gtggtggcgatgggagtgctgaaatgggttgattggactgtgtctgagtccagctatttt
cagttgcagacggaccatacacccgttcacttggccttactggatgagatcagtacctgc
caccagcttctccatccccaggtcctgcagctgcttgttaaactgtttgagactgaacat
tcccagcttgatgtcatggagcagttggagctgaagaaaaccctgctggacaggatggtt
cacctgctgagtcgtggctatgtcctgcccgtggtcagctatatgcgcaagtgcctggag
aagctcaacacagacatctcactgatcagatactttgtgacagaggtcctggatgtcatt
gccgcaccgtacacctcagatttcgtccacctttttctcccaattctggagaacgacagc
attgttggcacaattaaaactgaaggggagtgtgatgctgtggcagagtttatcgcacac
tgcaaatccaacttcatcatgatgaactaa
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