Leucoraja erinaceus (little skate): 129707214
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Entry
129707214 CDS
T09122
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129707214
03036 Chromosome and associated proteins [BR:
leri03036
]
129707214
Transcription factors [BR:
leri03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129707214
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129707214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2H2_15
zf-C2HE
zf-C2H2_ZN142
GAGA
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
129707214
NCBI-ProteinID:
XP_055508021
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All DBs
Position
21:8189605..8226494
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AA seq
625 aa
AA seq
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MMESEILFHETTLFLTKSEEDIVEYSVERGSSDKMHVITLQVVNMDDHVQPCLNEVNLMT
VHQEGIEIIPTGVNQALESEGEIMHTLPLPEGVQVFKVGPNGEMQNVEHTDLGTATTEAD
YMGTLVYQDHNPANKEKSTLPLNMQVGNTTDVSICEHRETLLEGSRPDVIVENIGLVNSN
RPIKIKTKGVKKTFPCNLCSRTFPQRSSVDRHMRSHTNERPHKCHLCDKAFRTITLLQNH
INTHTGTRPHKCPDCAMAFVTSGEVVRHRRYKHTHEKPFKCSICDYASVEVSKLKRHIRS
HTGERPFPCTFCSYASRDTYKLKRHMRTHSGEKPYKCHICQANFTQSGTMKMHIRQKHMD
NVPKYHCPHCNAIIARKSDLGVHLRKQHSYTSSGMKCRYCETMFHERYTLIQHQKTHRNE
KRFKCDECDYACKQKRHMIMHRRIHTGEKPFNCTQCDKSFRQKQLLDLHFKKHHDPSFVP
EAHVCSWCCKSFTRKNIMKKHAEKCRSQRVQDKDAAVTAKKIKSSKMMLDSRNPKKAKED
EPPVEQKTSKIIERTNDAHIGKYVQTNTVEEVENIKGKSADMNPGPQDPAESVSSHMDNS
RKLDTQHTQAKKEITPEMILKEMVL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaagtgaaattttattccatgaaacaactttatttttgacaaaatcagaggag
gacattgtggaatattctgtagagcggggaagttctgacaaaatgcacgtcatcacatta
caggtggtgaatatggatgatcacgtccaaccttgcctgaatgaggttaatttaatgaca
gtgcatcaagaagggattgaaatcattccaactggtgtgaaccaagcattggaaagtgag
ggagagataatgcatactcttccgctccctgagggagtacaagtgtttaaggttggtcca
aatggagaaatgcagaacgttgagcatacagatctgggtactgctactactgaagcagat
tacatgggcacactggtgtatcaggatcataatcctgctaacaaggaaaaaagtacattg
ccacttaacatgcaagttggaaatactacagatgtgtccatttgtgaacatcgagagaca
cttttggaagggtcacgaccagatgtaattgtagaaaatattggtcttgtcaatagcaac
agacctatcaaaattaaaactaaaggcgttaagaagacttttccgtgtaatctatgttca
cgcaccttccctcaacgatctagtgtagaccgtcatatgagaagccatacaaatgaacgg
ccacataaatgtcatctatgtgataaagctttccgaaccatcaccctcctccaaaaccat
atcaatactcatacaggcactcgaccacacaagtgtccagactgtgctatggcgtttgtt
acaagcggggaagtagtgcgacatagacgttacaagcacactcatgagaagcccttcaaa
tgctcaatctgtgattatgccagcgtggaggtaagtaagctgaagcgacacatccgctcg
cacaccggcgagcgtcctttcccatgcacattttgcagctacgctagcagagatacatac
aagttgaagagacacatgagaactcactcaggtgagaaaccttacaaatgccatatttgc
caggctaatttcacacagagtggtacaatgaagatgcacatccggcagaagcacatggac
aatgtgcccaagtaccactgtcctcactgtaatgctataattgcaagaaaaagtgacttg
ggcgtccatttacgaaagcagcattcctatacaagctctggcatgaagtgccgttactgt
gagactatgttccatgagcgctacacacttattcagcatcaaaagacccacaggaatgag
aaacgctttaagtgtgacgagtgtgattatgcatgtaaacagaaacgtcacatgataatg
cataggcgtatccacactggagagaaaccatttaactgcactcagtgtgataaaagtttc
agacagaagcagctgctggatctgcatttcaagaaacatcatgatcccagttttgttcca
gaggcgcacgtttgctcctggtgttgcaaaagctttacacgcaagaacatcatgaaaaaa
catgccgagaagtgcaggagtcagagggtgcaagataaagatgcggcagtgacagcaaag
aaaatcaagagtagcaagatgatgctggactccagaaaccccaaaaaagcaaaagaagat
gagcctccagttgagcaaaagacctcgaagatcattgaaagaacaaatgatgctcacatt
ggaaagtatgtccagacaaacacagttgaagaggtggaaaatattaaaggaaagtcagct
gacatgaaccctggcccacaggatcctgcagagagtgtttccagccacatggacaacagc
agaaagctggatacacagcatactcaagccaagaaagagattactcctgagatgatccta
aaagaaatggtcctttga
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