Leucoraja erinaceus (little skate): 129707220
Help
Entry
129707220 CDS
T09122
Symbol
pcif1
Name
(RefSeq) mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase isoform X1
KO
K17584
phosphorylated CTD-interacting factor 1
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
leri01009
]
129707220 (pcif1)
Protein phosphatases and associated proteins [BR:
leri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129707220 (pcif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCIF1_WW
WW
Motif
Other DBs
NCBI-GeneID:
129707220
NCBI-ProteinID:
XP_055508035
LinkDB
All DBs
Position
21:9479476..9579828
Genome browser
AA seq
887 aa
AA seq
DB search
MPRDESGTAHLTSVRNSRQDARRREPGRQWRRCERAPCRRHLEAITVTPLGSAVCSSVGA
DALPPLPIKEKPLAYASVLNCRESNGYFKVCRANANKMASENHSSLQAGDPTTIIRPAST
SEQGQPSSPKSVKPLVQDLPDELVQAGWSKCWSRRENRPYYFNKFTNQSLWEMPVFGQHD
IISDPLGLNATVESGDGDSIADNAQRKRRHSEETQQQSTNSFKRPRVHGEVVQPRRKWSH
CSVSKTDASLTPTTPISPIVSGAPSTPISRTSGSKSSDEKPQPAPSSLVPPASAPASAPA
PAPAPAPAAAPAPAPAAAATSAATSAATSAATSAPSSSSSSSSSSSSAVHTPASVRPTAV
YWDLDIPTNAVIKERAPFELLPPHPDVEMLRSQLTIKLRQHYQELCQQREGIEPPRDSFN
RWLLERKVIDKGMDPLLPSDCDPIVSPSMFREVMNDIPIRLSRIKYREEARRLLFKYAES
AKRMIESRNATPDIRKTVKWNVEDTFNWLRKEPSATKEDYMERLDHLRKQCGPHVAAVAK
DSVEAICGKIYCISGEYVKRVRDKHLAVLSECNMSEELERPEVTDRLVYCYPSRLAYSTI
PLPRVEMHFENDIACVRYKGEVRKISRNYLNKLEQLYRYSCIDDPRFDKFLARVWCLLRR
YQTMFGPGTHEGTGLQGALPVSVFETLNKQFGVTFECFASPLNCYFRQYCSAFPDTDGYF
GSRGSFLTFSPVGGSFEANPPFGEELMDSMVAHMENLLGNSNEPLSFIVFVPEWRNPPTP
ALVRMEESKFKRHQVLIPAYEHEYRSGAQHICKKEDIYYKAVHSTALIFLQNDAGFAKWE
PAQERVQELMAAYKIAGKSSSSSSSSVTPGDKDQEQNRDQSSNTEHL
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtgacgagagcggtaccgcgcacctcaccagtgtccgtaactcccgccaggac
gcgaggaggagagagccggggaggcagtggcggcgctgcgagcgggctccctgccgtcgc
catcttgaggctattactgtgacaccactcgggagcgcggtctgctcgtccgtcggcgcc
gatgctctgcctcctctcccgattaaagaaaagccattagcctatgcatctgtccttaat
tgtcgagaaagtaatgggtatttcaaagtttgcagggcaaatgcaaacaaaatggcaagt
gaaaatcacagcagcctgcaagcaggggatcccacgacaattatccgtccagcgagtact
tctgaacaaggacaaccctcatcaccaaagtctgtaaaacctttggtgcaggatttgcca
gatgagctggtgcaggcaggatggtcgaagtgttggagtaggagagaaaataggccatat
tacttcaacaagttcaccaaccagtcgctctgggagatgcctgtatttggacagcatgac
atcatttctgatcctcttgggttaaatgcaactgtggaatcaggtgacggagattcaata
gctgacaatgcacaacggaagagacgacattctgaagaaacccagcagcaatcaacaaat
agcttcaaaagacccagagtacatggagaagtggtgcaaccgaggaggaaatggtcccac
tgcagcgtttcaaagacagatgcctccttaactccgacaactcctatttctcccattgtt
tctggtgctccaagcacacctatatcccgaacaagtggatccaaatcatctgatgaaaaa
ccccaacctgcgccttcatcattggtgccaccggcatcagcaccggcatcagcaccggca
ccggcaccggcaccagcaccggcagcggcaccagcaccagcaccggcagcagcagctaca
tcggcagcgacatcggcagcgacatcagcagcgacatcagcaccgtcatcgtcctcgtcc
tcatcctcatcctcgtcatcagctgttcatacacctgcatctgtccgtccaacagctgtt
tactgggaccttgatattccaacaaatgcagtaattaaggagcgtgctccatttgagcta
cttccgccacacccggatgtagaaatgctacgatcacaattgacaataaaactgagacaa
cactatcaagagctgtgtcaacagagagaagggattgaaccgcctcgtgactcatttaat
cgctggcttttggagcgcaaggtgatcgacaagggcatggatcctttgttgcccagtgat
tgtgatcctattgtatctccttccatgtttcgagaagtaatgaatgatattcctatcaga
ttgtctcgtattaagtacagggaagaagcccgaagattacttttcaaatatgcagaatca
gcaaagcggatgattgaatcgaggaatgctacaccagatatcaggaaaactgtaaaatgg
aacgttgaagataccttcaattggctacgaaaggagccatctgcgacaaaagaagactat
atggagcggcttgaccatttgcggaagcaatgtggacctcatgtagcagcagtggctaaa
gattcagtagaagcaatctgtgggaagatctattgcatatctggtgaatatgtgaagcgt
gtccgagacaagcatttagcagtactgagtgaatgcaatatgtcagaagagttggagagg
cccgaggtaacggacagattggtgtattgttatccgtcaaggcttgcatactctacgatt
ccactcccacgcgttgaaatgcactttgagaatgatattgcatgtgtacgatataaagga
gaagttaggaaaatcagccggaattacttaaataaattggaacagttgtataggtacagt
tgtattgatgatccacggtttgacaagtttttggcaagagtctggtgtttactcaggcga
taccagaccatgtttggtcctggaacacatgaaggcactgggctgcaaggggcattacca
gtatctgtatttgaaacattgaacaagcagtttggtgtgacgttcgagtgctttgcatca
ccattgaactgttacttcagacagtattgctctgcgttccctgacactgatggctacttt
ggttccaggggctcattcttgactttctcaccagtcggcggctcctttgaagcaaatcct
ccgtttggtgaagagctgatggacagtatggtcgcacatatggagaaccttctgggcaat
tcaaacgagccactctccttcattgtgtttgtcccagaatggagaaaccctccaacaccg
gctttggtccgaatggaggagagcaagtttaagcggcaccaggttctcatcccagcctat
gagcatgagtacaggagcggagcacagcacatctgcaaaaaggaagacatctattataaa
gctgtgcactcaacagctctcatcttcctgcagaatgatgctggatttgcaaaatgggaa
cctgcgcaggagcgggtgcaggaattaatggcagcttataaaatagcaggaaagtcatca
tcttcttcgtcctcctctgtgacacctggtgataaagatcaggaacagaatcgggaccaa
agcagcaacaccgagcacctttga
DBGET
integrated database retrieval system
