Leucoraja erinaceus (little skate): 129707246
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Entry
129707246 CDS
T09122
Name
(RefSeq) calcium-responsive transactivator-like isoform X1
KO
K15623
protein SSXT
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129707246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
leri03036
]
129707246
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129707246
GBAF(ncBAF) complex
129707246
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
129707246
NCBI-ProteinID:
XP_055508096
LinkDB
All DBs
Position
21:complement(11491155..11567686)
Genome browser
AA seq
456 aa
AA seq
DB search
MSVAFASARQRGKGEVTQAIIQKMLDENNHLIQCIMDYQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAPPSQNLSMGPGGMNLPGSNQALHSQNVPNDTMGGGIPPSTLMQ
NQMSNGPTHVSVQQSGPATMPSTSMNMPVSNHGTPGGYSHSVPSSQGMQMQGQNQSLANY
GSRTNMSMQTSQVPMIHQQAATPHYNTPQGGGQHYQGQSTMGMMGQSNQGSNIMGQRPIG
PYRSTQQGSSQQYIGQEDYYGEQYGHAQGPTDTINQQYYPDGHSEYAYQQSYAEQGYERS
FEESSQHYYEGETVAQLPGLIKGNSQYAQQQSAYQQAPTQQQTYSQQQYPTQQSYPGQQQ
GYGATQGASSQYPGYQQGQGQQYGSYRTAQPGPSAQQQRPYGYEQCNNPAEVLDVSVGLQ
INTASTMTSSQKRASGTALEVLHTGTVRKLPAIGNS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggcctttgcatcagctcgccagcgggggaaaggggaggtcactcaagctatc
attcaaaagatgttggatgagaacaatcatttgatacagtgtatcatggattaccagagt
aaaggcaaaactgcagaatgttctcaatatcaacagatgctgcacagaaatttggtttac
ttggcaactatagcagattctaatcaaaacatgcagtccttgctacctgctccaccatcc
caaaacctgtcaatgggaccaggaggaatgaatctgcctggatcaaatcaagctttgcat
tcgcaaaatgttcctaatgacactatgggaggagggattcctccttccacactaatgcag
aaccagatgagcaatggtcctactcatgtttccgttcaacagtcaggaccagccacaatg
ccaagtacttcaatgaatatgcctgtaagtaaccatggaacaccaggtggctatagtcat
tctgtgccctcttcacaagggatgcagatgcagggtcagaatcagtcgctggcaaactat
ggatcccggacaaacatgagcatgcaaaccagtcaagttccaatgatacaccagcaagct
gcaacgccacattacaatacaccacaaggaggtggacaacattaccagggacagtcgact
atgggaatgatgggacagagtaaccaaggcagcaacataatgggccaaaggccaataggg
ccttatagatcaacacaacaagggtcttctcaacaatacattggacaggaagattactat
ggtgagcaatatggacatgcccaaggacccacagataccattaatcaacaatattatcct
gatggtcacagtgaatatgcataccaacaatcatatgcagaacaaggatatgagaggtca
tttgaggaatcctcacagcattactacgaaggagagaccgttgcgcaactccctggcttg
ataaaaggaaactcacaatatgcccaacagcaatcggcttaccagcaggcaccaacccag
cagcagacttactcccagcagcaatatcctacccaacagagttatcctggccaacaacaa
ggatatggtgcaacacagggagcctcttctcaatatccaggttaccaacagggtcaaggc
cagcaatatggaagttataggaccgctcaaccagggccctcagctcagcaacagaggcct
tatggatatgaacagtgcaataatccagctgaggtgctagacgtgagtgtgggactgcaa
atcaacacagccagcaccatgacttcaagtcagaaacgggcctctggcacagctttggag
gtactgcatacaggcacagtacggaaactaccagcaataggcaacagctga
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