Leucoraja erinaceus (little skate): 129707267
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Entry
129707267 CDS
T09122
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129707267 (dhx35)
Enzymes [BR:
leri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129707267 (dhx35)
Spliceosome [BR:
leri03041
]
Complex C
Other components
Complex C specific factors
129707267 (dhx35)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
ABC_tran
DEAD
Cas3-like_C_2
AAA_19
AAA_30
UPF0203
Motif
Other DBs
NCBI-GeneID:
129707267
NCBI-ProteinID:
XP_055508154
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All DBs
Position
21:complement(15062461..15127616)
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AA seq
701 aa
AA seq
DB search
MAAPMTAPKFWKPGTEGPGLGISEERISSAEASGTAVIHNRYASLSIEQQRQKLPIFKHR
NHVLYLVENYQTLVIVGETGCGKSTQIPQYLLEAGWTAEGRVIGVTQPRRVAAVSVAGRV
AEERGAMLGHEVGYCIRFDDCTDSQATRIKFLTDGMLVREMMADPLLKKYSVLLLDEAHE
RTLYTDVAIGLLRKIQKKRGDLRLIVSSATLDAEKFRNFFNLNETKDPSKDTCGILTVEG
RMFPVDIFYTLSPVPDYLKATVDTVTKIHQNEADGDILAFLTGQEEVEMVVSMVIEQARA
LSRSGMKKHLRVLPMYAGLPSSEQMKVFERMSPNCRKIVVATNIAETSITISGIVFVIDC
GFVKLRAYNPRTGIESLVVTPVSQASATQRAGRAGRNRSGKCYRLCTEETFEKLPESTVP
EMQRSNLAPVVLQLKALGIDNVLRFNFLSPPPAQSMVQALELLYALGGLNDQCFLTDPLG
LRMAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVVPPNQKSAAAREHRKFAV
AEGDHLTMLNIYEAFIKHNKNSQWCQKHFLNYRGLVRATTVREQLKKLLSKFRVPKKSSE
GDPDPILRCIVLGFFANAAKFHYSGFYRTIRDDYELHIHPTSVLYGEKEPQWVVYNEIIQ
TSKYFMRDVTAIESSWLIELAPHFYQQKTSISQMAKKSRIT
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccatgaccgctccgaagttttggaaaccaggcactgagggccctggtctg
ggtatatccgaagaaagaattagttctgcagaagcaagtggaactgcagtgattcacaat
cgatatgcttccctctccatagagcagcagaggcaaaagctgccaatctttaagcacaga
aatcatgttctttacttggtcgagaactatcagacgctggtgattgtcggtgaaacaggc
tgtggaaagagcactcagatccctcagtacttattagaagctggttggactgcggaaggc
cgagtgattggtgtgacacaacctcgtagagtggctgcagtttcggtggcgggacgggtg
gcagaggagcgaggtgcaatgttgggtcacgaggttggatattgcatccgttttgatgac
tgcacagattcccaagccaccagaataaagttccttacagatgggatgctcgtcagggaa
atgatggctgaccctttattgaagaaatacagtgttcttctcctcgacgaggcccatgaa
agaactctgtacaccgatgtggccattggtttactaagaaagattcagaagaaaagaggc
gatttacgactgattgtgtcttctgctacactggatgccgagaaatttcgaaatttcttc
aatctgaatgagaccaaggaccccagtaaggacacatgtggtatcctcaccgtcgagggc
cggatgtttcctgttgatattttttatacattaagcccagttcctgattatctgaaagcc
acagttgacacggttacaaagatccaccagaatgaggccgatggggatatcttggcgttt
ctaacaggacaggaggaagtggagatggtggtttccatggtgatcgagcaggcccgtgct
ctttcccgcagtgggatgaaaaagcacctccgtgttcttcctatgtatgcagggttgcct
tccagcgaacagatgaaagtctttgaaagaatgtccccgaactgcaggaagatagtggtg
gccacgaacatagcagaaacctcgatcactatcagcgggatcgtttttgtcatcgactgt
ggctttgtgaagctgagagcctacaatcccaggacaggtatcgagtctcttgtggtaact
cctgtatcccaggcatctgcaacccagcgagcgggtcgggctggtcgaaaccgctcgggg
aagtgctacagattgtgcacagaagaaacatttgagaagcttccggaatccacagtgcca
gagatgcaacgcagtaatcttgccccagtcgtacttcagctgaaagcactgggcattgac
aacgtgctgaggtttaattttctgtctcctcctccagcccagtcaatggttcaggctctg
gaactgctctatgcgctcggaggtttgaatgatcagtgcttcctcactgacccccttggt
ctacgcatggctgaatttcctctaaatccgatgtttgctaaaatgctgctggaatcaggg
aactttgggtgttcgcaggagatcttgagcatagcggccatgatgcagatacagaatgtg
tttgtggtacccccgaaccagaaaagtgctgcggcaagagaacacaggaagtttgctgtc
gctgagggcgatcatctcacaatgctcaacatctatgaggccttcattaagcacaataag
aactcgcagtggtgtcagaaacacttcttaaattacagaggacttgtcagagccacaaca
gtccgggaacaactgaaaaaattgctgtcaaagttcagagtgccaaagaagtcaagtgaa
ggtgacccagaccccatcctccgatgtattgttttgggcttctttgcgaatgcagcaaag
tttcattacagtggattctacaggaccattcgagatgattatgagctccacattcatcca
acatcggtgctatatggggaaaaggagccacagtgggttgtatacaatgagatcatccag
acgtccaagtacttcatgagggatgtgactgcaatcgagtcttcatggttgatagagctt
gccccacacttctaccagcagaaaacctccatttcacagatggcaaagaaatctcggatt
acctga
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