Leucoraja erinaceus (little skate): 129707320
Help
Entry
129707320 CDS
T09122
Symbol
rbm39a
Name
(RefSeq) RNA-binding protein 39a isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129707320 (rbm39a)
Spliceosome [BR:
leri03041
]
Common components
Common spliceosomal components
General mRNP proteins
129707320 (rbm39a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
PRP38_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
129707320
NCBI-ProteinID:
XP_055508243
LinkDB
All DBs
Position
21:17730135..17769306
Genome browser
AA seq
555 aa
AA seq
DB search
MADDLDIEAMLEAPYRKEDENKSSKANGQEERSKKKKKSRSRSHSRERKRSRSKERRRSK
ERERRRSRSRERKSSKNREHRRSRSKDRRRVERGRYRSPFSGPKFSSGGSSRGKIGMQPG
IKISRRRSRSRSPHKKDKSPIREPIDNISPEERDARTVFCMQLAARIRPRDLEEFFSSVG
KVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQKLLGVPIIVQASQAEKNRAAA
LANNLQKGTAGPMRLYVGSLHFNITEEMLRGIFEPFGRIENIQLMMDSETGRSKGYGFIT
FSDAECAKKALEQLNGFELAGRPMKVGHVTERSDSSNASSFLDSDELERTGIDLGTTGRL
QLMARLAEGTGLQIPPAAQQALQMSGNISLGAMAAAADQGCNDVWSRVVLGEPKLNINEQ
VLDLQTRIMQQTEALNPPMAVNAPPIATQCFQLSNMFNPQSEDDPAWDQEIRDDVIEECN
KHGGVIHIFVDKNSPQGNVYVKCPTIAAAAAAVGALHGRWFAGKMITAAYVPLPTYHNLF
PDSMTTAQLLTPARR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacctggatattgaagcaatgctggaagcaccgtatagaaaggaggatgag
aacaaatcgagcaaagctaatggacaagaggaacgtagtaaaaagaaaaagaagagccga
agtcgtagccacagccgtgaaaggaagagaagtagaagcaaagagcgtaggcgtagcaag
gaacgagaaaggaggagaagcaggagcagagagagaaaaagcagcaagaatagggaacat
cgtcgcagccgaagcaaggaccgaaggagggtagaaagaggccgttacaggagtcctttt
tctggtccaaaattcagcagtggtggtagcagcagagggaagattggcatgcaacctggt
atcaaaataagtcgaaggcgatctcgaagcagaagcccacacaaaaaggataaaagtcca
ataagagagccaatcgataacatttcacctgaagaaagagatgcccgcacagtgttttgt
atgcagttggcagcacggatacgacccagagacttggaggaatttttttcttctgtagga
aaggttcgtgatgtaagaatgatatcagataggaactctagacgctcaaaaggaattgct
tatgtagaatttgtcgatgtgagctctgttccactcgcaataggtttgacggggcaaaag
ctgcttggtgtgccaattattgttcaggcttcacaggctgagaagaacagagctgcagcg
ctggctaacaacctccagaaaggaacggcaggaccaatgaggctatatgtaggatctttg
cacttcaatatcactgaagaaatgttgagaggaatttttgaaccctttggtagaattgaa
aatatacaactgatgatggatagtgaaactggccgatcgaaaggctatggattcataacg
ttttctgatgctgaatgtgcaaagaaggctttggaacaattaaatgggttcgagcttgcc
ggtagaccaatgaaggttggccatgtgacagaacgatctgattcttccaatgccagctca
tttctagacagcgatgaattggaaaggactggtattgaccttggaacaacggggcgtctg
caactgatggctaggctggcagaaggaacaggattgcaaatacctccggcagcacaacag
gctttgcagatgagtggcaacatttcattgggtgccatggcagcagcagcagaccaagga
tgcaatgatgtctggagcagagtggtcctgggggaacccaagctgaacatcaatgaacag
gttcttgatttgcagaccagaattatgcagcagactgaagcattgaatcctcctatggct
gtaaatgccccaccaatagcgacacagtgtttccagttgtccaacatgtttaacccacag
tcggaagatgatccagcctgggaccaagaaatccgagatgatgtaattgaagaatgcaat
aaacatggaggagtaattcacatatttgtggataaaaattcaccccagggaaatgtctat
gtgaaatgtcccactattgccgctgctgctgcagctgttggcgccttacacggaaggtgg
tttgctggaaaaatgatcaccgctgcctatgtgccacttccaacctaccacaacctcttt
ccagactcgatgacaacagcccagctgctgactccggcaagacgatag
DBGET
integrated database retrieval system
