KEGG   Leucoraja erinaceus (little skate): 129707327
Entry
129707327         CDS       T09122                                 
Symbol
sdc4
Name
(RefSeq) syndecan-4
  KO
K16338  syndecan 4
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri04512  ECM-receptor interaction
leri04514  Cell adhesion molecule (CAM) interaction
leri04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:leri00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129707327 (sdc4)
   04514 Cell adhesion molecule (CAM) interaction
    129707327 (sdc4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129707327 (sdc4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:leri00535]
    129707327 (sdc4)
Proteoglycans [BR:leri00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   129707327 (sdc4)
SSDB
Motif
Pfam: Syndecan HAT_Syf1_M GP1BB_C Glycophorin_A MtrF
Other DBs
NCBI-GeneID: 129707327
NCBI-ProteinID: XP_055508255
LinkDB
Position
21:complement(18185386..18212023)
AA seq 187 aa
MSKIWALATVFVIFTWNFTSAKTLKDVDTSHLNELEGSGYEESSPYPGHVNEYGSGYGSG
DDVDSDEEDDPIDDEDDDERDNNIPDLDVAVVEESPVLSNEVLLNKNAPSNDDVNNRIAL
ASTNNNSSVFASTEMLAAMIAGGTIGLLFAILLILLLVYRMRKKDEGSYDLSKKPIYKKA
PTTEFYA
NT seq 564 nt   +upstreamnt  +downstreamnt
atgtcgaaaatctgggcactagctaccgtgttcgtcattttcacttggaacttcacatca
gctaagacactaaaggatgttgacacgagtcatctcaatgagctggaaggttctggttat
gaggagtccagtccgtaccctggccacgtgaatgaatatggttctggatatggttctgga
gatgacgttgacagtgatgaagaagacgatccaatcgatgatgaggatgacgatgaacgg
gacaataacatccctgaccttgatgtggccgtggttgaagagagccctgtgctgagcaac
gaggtactcctgaacaaaaatgccccgtcaaatgatgatgtcaacaaccggattgctttg
gccagcaccaacaacaactccagcgtgtttgcaagcacggaaatgctagcagccatgatc
gctggtgggaccataggcctcctgtttgccatcctgctcatcttgctgctggtctaccgc
atgcggaagaaggacgaaggcagctacgacttgagcaagaagcccatctacaagaaggcg
cccaccactgagttctacgcataa

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