Leucoraja erinaceus (little skate): 129707467
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Entry
129707467 CDS
T09122
Symbol
rtel1
Name
(RefSeq) regulator of telomere elongation helicase 1 isoform X1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
leri03032
]
129707467 (rtel1)
Enzymes [BR:
leri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129707467 (rtel1)
DNA replication proteins [BR:
leri03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
129707467 (rtel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
ARCH_RTEL1
Helicase_C_2
HHD_RTEL1
ResIII
DEAD
zf-RING_4
PAH
zf-UDP
Motif
Other DBs
NCBI-GeneID:
129707467
NCBI-ProteinID:
XP_055508489
LinkDB
All DBs
Position
21:31142964..31220984
Genome browser
AA seq
1353 aa
AA seq
DB search
MPQIQLDGIDINFPYVPYKCQEDYMSKVIECLQKKVNGVLESPTGTGKTLCLLCASLAWR
QHLKDSISATKIINKLNGEELFDSRSLSSWGRGLEDIDLGYREIPKIIYASRTHTQLTQV
INELKATSYRPKMCVLGSREQLCIHPEVMKLESNHAKIHMCRAKVSMRTCHYYNKVDEKS
TDKEFTEPILDVEDLVKGGHKHRVCPYYLSRAMKQNAEIIFMPYNYLLDPKSRKTHDIDL
QGTVVIFDEAHNVEKMCEEYASFDLAPYDLASGIEAVNLILEEEAKKFQHIVNTDDNPES
INSGMKMDLSDLAKIKKILLDLESTIDSIELSSDGSGVTKPGSFIYELFAKAQITFQNKS
AIFEALEQIITAMSENTGIFTNTNGLQKIADILQIVFCINPPEGTTADTMGQSAAKHYKV
HIHPDNSGNKKQQRTDLWTSSVTKKQGKTLSYWCFSPGYSMAELVRHGIRSIILTSGTLA
PLSSFTSEMQIPFPVTLENPHVIDKHQIWIGIVPKGPDGVQLSSAYNNRFTPEYMSSLGK
TMVNLCRVVPNGLLVFFPSYPVMEKSLQYWKEEGISSRIEEIKPIFVEVKGKGLFTEVMD
AYYDKVNNPQSNGACFCAVCRGKASEGLDFADMNGRGVIVTGLPFPPRMDPRIILKMQFL
DEMRRKCIGNVKYLSGQEWYRQQASRAVNQAIGRVIRHRNDYGAIFLCDHRFTGTEAKSQ
LPSWLQPHVKVYDNFGHIIRDVSQFFRVAQKVMPPPKPKLVPCSAQSSEVNSAASSFFTA
PGPVLKKAKTLDSHVPSLKRKRAGEPAGEDLFCCTDEPSGKDGMAKLCIEYEKVSKSTRK
KPVSLLDALEHSELKPNEGKSQCEKKAVKMTTTSLKQMSGEPRGGRKKITLVNSYGFDVL
SATEKTKSEKAKFLIMAVKEALSKANYERFTEAMQKYKMTDDFDTMLGEMAALFTEDVRK
NNLLREFYQFVRPHHKKMFDEACYNLTGEGCGFKPEHVVPREERQKVEQEANAGSESEWK
FEPALSDVNKRTTSSQQLNACTHLNKGGQHLTNGPVSKGEIYNHEPTSFSDGSSKTSATT
AEQKKQQLLAAYVNDAKKALGPCKYSTFSTILQTYKRTDNYENMVSEIAALFTEKSEDFH
LLRRFYMFVRTHHKIHFNQMCKDLTGMDCKQSIEKEPQPDGQGESLNKNQQEPPKHALVT
KNEIASNSENVGEGSVSTQSKISAFFPKSEKLKQTSAPGTSSSWHCVYDCSVKNSLSNVQ
EIPTKSIRPATSNESLPPFSSNLKLGFHCILCRVDATMPFSCQNCEFTCCMCCWKQLLKE
NKMCPNCKVTTTRRHLRQVLFARDESRSSDGRS
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaatacagctcgatgggatcgacataaattttccttatgttccctataaatgt
caagaggattatatgtccaaggtgatagaatgcctacaaaagaaagtaaatggggttctg
gaaagccctacagggactggaaaaacactttgccttttgtgtgcttccctagcttggagg
cagcatttaaaagacagcatttcagcaactaaaataatcaataagttaaatggtgaagaa
cttttcgatagcaggtctctatcctcatggggcagaggacttgaagatattgatttaggt
tatcgtgaaattccaaagatcatttatgcctcaaggacccatacacagctcactcaggtt
ataaatgaactaaaggctacatcatacagaccaaagatgtgtgtacttggatctcgagaa
cagctctgtatccatcctgaagtaatgaaactggaaagcaatcatgcaaagatccatatg
tgtcgagcgaaagtatccatgcgcacttgtcactactataacaaggttgacgaaaagagt
actgataaagaatttacggagcccattcttgacgtagaagatcttgttaaaggtggccac
aagcacagggtttgtccttactatttgtctcgagcgatgaagcagaacgctgaaataatc
ttcatgccatacaactatttacttgatccaaagagtcgcaaaactcatgatatagacctt
caaggcacagtcgttatttttgatgaagcacataatgtggaaaaaatgtgcgaagagtat
gcttcgtttgaccttgctccctatgaccttgcttctggaattgaagctgttaatctgatc
ctggaggaagaagcaaagaagtttcaacacattgtcaacacggatgacaatcctgaatca
atcaactcgggaatgaaaatggatttgagtgatctagccaaaataaaaaaaatcctcctt
gacctggaaagcacaatagattctattgaattgtcatcagatggaagtggagtgactaaa
ccaggaagtttcatctatgaattatttgcaaaagcacaaattaccttccaaaacaagtct
gcaatttttgaagcactggaacagattataactgccatgtcagaaaatactggaatattc
accaatacaaatggattgcaaaaaatagctgatattctgcagattgttttttgcataaat
cctcctgagggtactactgcggacaccatgggtcagagtgctgccaagcattacaaggtt
cacatacacccagataacagtgggaacaagaaacagcagcgaactgatttatggacttcg
tcagttacaaaaaaacaaggaaaaacgttaagctattggtgcttctcccctggctacagt
atggctgagttggttcgccatggtattcggtccatcatcctcacaagtggcactcttgct
ccgctgtcctccttcacatcagaaatgcaaattcctttccctgtaactctggaaaatcct
catgtaattgataaacatcagatatggattgggattgttccaaaaggccctgatggagta
cagttgagctctgcgtacaacaatagatttacacccgagtacatgtcttccctaggaaaa
acaatggtaaacctgtgcagagtggtgccaaatggtttgttggtgttcttcccatcatat
ccagtcatggaaaaaagcctacagtattggaaggaagagggaatttccagcagaatagag
gagatcaagcctatctttgtggaagtcaaaggcaaaggattatttacagaggttatggat
gcgtactatgataaagtaaataatccacaatcaaatggcgcatgtttctgtgcagtctgt
agaggaaaggccagcgaaggcttggattttgctgatatgaatggacggggtgtgattgtc
actggtttgccatttcctccacgaatggatcccagaataatactaaagatgcaattcctt
gatgaaatgagaagaaaatgtattggaaatgttaagtatttatctggacaagaatggtat
aggcagcaagcttcgcgagctgtcaatcaagctattggaagggtaattcgtcaccgaaat
gactacggagccatttttctgtgtgatcatagatttacaggcactgaagcgaaatcacag
ttgccgtcatggttacagccacatgttaaagtgtatgataactttggacacattattcga
gatgtatcgcagttttttcgagttgctcaaaaagttatgcctccaccaaaaccaaagttg
gtgccttgcagtgcccaatcctcagaagtcaattctgctgcgtcgtctttttttactgct
cctgggccagtgctgaagaaagcaaaaacattagattctcatgtgccaagcctcaaaaga
aagcgtgctggcgagcctgctggggaagatttgttttgttgtacagatgagccttctggg
aaagatggtatggctaagctctgcattgaatatgaaaaagtctctaaaagcacaagaaag
aagcctgtgagtctccttgatgctttagaacacagtgagctcaaacccaatgaagggaag
tcccagtgtgagaaaaaggcagttaagatgacaactacatctctgaaacagatgagtgga
gaaccgaggggcggcagaaaaaaaatcacccttgtgaatagttatggattcgatgtgctt
tcagcaacggagaagacaaaatcagaaaaggctaaatttttaatcatggctgtaaaagag
gctctgagcaaggccaactacgagcgtttcacagaagcgatgcaaaagtacaaaatgact
gatgattttgacaccatgctcggtgaaatggcagctctttttacagaagatgtgagaaaa
aacaatcttctgcgagaattttatcagtttgttcgaccacatcataaaaaaatgtttgat
gaagcctgctacaatttgactggtgaaggttgtgggtttaaacctgaacatgtagtacca
cgagaagagaggcagaaagtagaacaagaggcaaacgcaggcagtgaaagtgagtggaaa
tttgagcctgcattatctgatgtgaataaacgcacaacctcatctcaacagctaaatgca
tgcacacaccttaacaaagggggacaacacttaaccaatggacctgttagcaaaggtgaa
atctataatcacgaaccaaccagtttttcagatggatcttcaaaaacatcagcgaccaca
gcagaacagaaaaaacagcaattacttgctgcttatgttaacgatgctaagaaagcttta
ggaccttgtaaatacagcacattctcaacaatacttcagacgtataaaaggaccgataac
tatgaaaacatggtgtctgaaatagcagccctatttacagaaaaatctgaggactttcat
ttgctaagaaggttttatatgtttgttagaacacatcataagatacattttaatcagatg
tgcaaggacctaacgggaatggactgcaagcagtcgattgagaaggagccgcagcctgat
ggacaaggggaaagtctgaacaagaatcaacaggagccccctaaacatgcacttgtgaca
aaaaatgagattgccagtaatagtgagaatgtaggtgaaggatctgtttcgacacaaagt
aagatttctgcgttctttccaaagagtgagaaattaaagcaaacaagtgcccctgggaca
tcgagttcttggcattgtgtttatgattgttcagtaaaaaacagcctctcgaacgttcag
gaaattccaacaaaaagtatacgccctgcaacatcaaatgaatcattgccgcctttctcc
tcaaatttaaagcttggtttccactgcatactttgtagagttgatgcaacaatgccattt
agttgtcaaaactgtgaattcacctgctgcatgtgctgctggaagcagttattaaaggaa
aataagatgtgtccaaattgcaaagtaaccaccacaagaagacacttgaggcaagttttg
tttgcgagagatgaatcacggagttctgatggacgttcttga
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