Leucoraja erinaceus (little skate): 129707544
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Entry
129707544 CDS
T09122
Name
(RefSeq) transforming acidic coiled-coil-containing protein 3-like
KO
K14283
transforming acidic coiled-coil-containing protein 3
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129707544
03036 Chromosome and associated proteins [BR:
leri03036
]
129707544
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129707544
mRNA cycle factors
P-body specific factors
129707544
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Sister chromatid separation proteins
TACC proteins
129707544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TACC_C
Motif
Other DBs
NCBI-GeneID:
129707544
NCBI-ProteinID:
XP_055508690
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All DBs
Position
1:13747549..13783925
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AA seq
892 aa
AA seq
DB search
MDLQSSTIMDEQCNPSTPVMNTGTSTFRSTQKENFPPKNATKLSKVSFQTPARDPVTRKV
LSPQLTNVLSPKVGENEQSLWNTEAPGRLEDKWHKDSRRSSEMSNLEFEVRLKQVTETNR
SANEVGPGNEEQGSSHGAYTLDLDMLDVMNPFTSNSKVMNSPDQSDNELDSREQCLKIIP
VNNQVLAKKTEKRSITPPYNMNTDRRMIISNDILLQVENQNNDMDQDPEVIISQALCSFD
VDCPEKIDPCGNQMKVEIPLPPAEHLSNLNSDNTDTDSSLQMGGQNLLNPPVLDKDLVSE
TSQKDVADSLQPLKLEIEFDGDRKKKPPPRKLGERLGSQLQRKKSGGTKERTAPSKIKND
KEQKIALEQSKEVGKLEETGPVDPLREPNHEVAWDKLEDLNVNPFGGMSKVCNSPSSVML
PAADSAPHALPDKKENGEPTPNKLEGFQKPDNIPGPSNFSGKTKEFQKQPVKKNTCKVKP
MVEVSAIPLFQDSQVFAVGDVLESRPVSNAERISDGLLHMRNVQSSHGMDNHFIAGSSDF
IDCIMEGDAEEFRPADQIPAFNEPIEIDYLEQFGHSLFHASALRKQSLYLKFDPLLRESP
AKVSVKPLENEPDAAEPTTRISDILDLEPVPGVHPDEGIVDNALVPGLYSILNDPVADFL
SAVPAEGAIVEVLKYSQKDLDAAIQVVKREADTKIMAVRQELVRQEALTLEWKQKHKESL
AQCAEMKNIVNEYTDMTFQMMEASDKNNQTSKAELEKVNEEKLQALKELNSVELSFSELF
KRFEKQKEVLEGYKKNEESLKKCAMDYMARIGKEEQRYQALKAHAEEKLNRASEEIALFR
TKYKAEVGALQALQRKEQMKAHSLESSLEDMTKQNAELSKLCDDLISKMEKI
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggatcttcaaagttccactataatggatgaacagtgtaacccatcgacaccggttatg
aacactgggacatcaacttttcgatctacacaaaaggaaaatttccctcctaaaaatgca
acaaaactttccaaggtgtccttccaaacccctgcaagagatcctgttacccgcaaagtg
ctgagtccacagctcaccaacgttttgtctccgaaggttggtgaaaatgaacaaagtttg
tggaatactgaggctccaggaaggcttgaggataaatggcataaagattccagacgtagt
tccgaaatgtctaatttggaatttgaagtacgacttaagcaagtgacagagactaaccga
tctgccaatgaagttggtcctggcaacgaggagcaaggttcatctcatggagcttatacg
cttgatcttgacatgcttgatgtgatgaatccatttacaagtaattcaaaagtcatgaat
tcgccagaccagagtgacaacgaacttgactctcgggagcaatgtctcaaaattatccca
gtgaataatcaagtgcttgcgaagaaaactgagaaaaggtcaataacccctccctataac
atgaacacagatcggagaatgattatctcaaatgacatccttttacaagtagaaaatcaa
aacaatgacatggaccaggatcccgaggtgatcatatcacaggcgctgtgcagctttgac
gtggattgtcctgagaagattgatccttgtggaaatcagatgaaagtggaaattccactg
cctcctgcagaacacctgtccaatctcaacagcgacaatacagacactgacagctcactc
caaatgggagggcaaaatcttcttaatcctccagtacttgataaagatcttgtgtctgaa
acgtctcagaaagatgttgctgattctttacaacctttgaaattggagattgaatttgat
ggtgacaggaagaagaagcctcccccaagaaagttgggggaaagacttggaagccagtta
cagcgtaagaaatctggtggcacgaaagagagaaccgcacctagcaaaataaaaaatgac
aaagaacagaagattgcactggaacagagcaaggaagttggaaagttggaagaaactggc
cctgtggatcccttgcgagagccaaaccacgaagttgcctgggacaaactggaggatctg
aatgtcaacccttttggtggcatgtcaaaagtttgcaattctcccagttctgttatgctg
ccagctgctgactctgcaccacatgcattgccagataagaaagagaatggggagcctact
ccaaacaaattggaaggatttcagaagccagataacattccaggaccaagcaacttcagt
ggaaaaactaaggagtttcaaaaacaacctgttaagaagaacacttgcaaggttaaaccc
atggtggaggtctcagcaattcctttatttcaggattctcaagtttttgctgttggagat
gtacttgagtccagacctgtatccaatgctgaaagaatttctgatgggctattacacatg
aggaatgtacaaagttcacatggcatggataatcatttcatagctggatcctcagacttt
attgattgtatcatggaaggtgacgctgaagaattcaggccagctgaccaaattccagca
tttaacgaaccaattgaaattgattacctggaacagtttggtcattcactgtttcatgcg
tctgctttgaggaagcagtctctgtacctgaagtttgatcctttgctgagggaaagtcct
gcaaaagtgtctgttaaacccctggagaatgaacctgatgcagcagagccaacaaccaga
atttctgacattttagatcttgaacctgttcctggtgtgcatccagatgagggaattgtg
gataatgccttagtgcctggtctgtactctattcttaatgatccagttgctgatttttta
tctgctgttcctgctgagggtgctattgttgaagtgctaaaatacagccaaaaagacttg
gatgctgcaattcaagttgtaaaacgagaagcagatactaaaatcatggctgtaagacaa
gagcttgttcgtcaggaagctttgactttggaatggaagcagaagcacaaggaaagcctt
gcacagtgtgcagaaatgaagaacattgttaatgaatatacagatatgacttttcaaatg
atggaggcatctgacaaaaataatcaaacgtccaaggctgagctagagaaagtaaatgag
gagaagctgcaggccttaaaggaactgaattcagtcgaactgtcattttctgaactgttt
aaacgatttgagaagcagaaagaagtactggagggttacaaaaagaatgaagagagttta
aagaaatgtgctatggattatatggcaaggattgggaaggaagaacagagatatcaggcg
ctgaaagctcatgctgaagaaaaattgaatcgagcaagtgaagaaattgcactatttcgc
actaaatacaaggcagaggtcggcgctctccaggctctacagcgcaaggaacaaatgaaa
gcccattccttggaaagcagtctcgaagatatgactaaacaaaatgcagaactatcaaag
ctctgtgatgacctaatttccaagatggaaaaaatctga
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