Leucoraja erinaceus (little skate): 129707613
Help
Entry
129707613 CDS
T09122
Name
(RefSeq) cilia- and flagella-associated protein 54-like isoform X1
KO
K25553
cilia- and flagella-associated protein 54
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
leri03037
]
129707613
Cilium and associated proteins [BR:
leri03037
]
Motile cilia and associated proteins
Sperm associated proteins
129707613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
Motif
Other DBs
NCBI-GeneID:
129707613
NCBI-ProteinID:
XP_055508713
LinkDB
All DBs
Position
22:132318..429385
Genome browser
AA seq
2282 aa
AA seq
DB search
MEPLPATFYGKLDQKNPVVSALDLELNDFKKYMEKTSSDDSYTRGANNLFYIWNTYEKLF
PVNYFEEKLLMIGDFLVRMKLYKLAVWQCYGRYLQQFGSFRIEDITDINEFKTVFFGNGI
DVKNSSFTLHALQMNCVCRYQMVKKVDPKLLNLESKRKCMSILKFLRFIMQVALPKEHLF
WLIFNGTTYIYTICRHFMVLALYAQTFARRALGKISELSHLEIINSSPQTPETRQAFREA
TVKVSLMIFKRAVFESRRKPKGYFRPKTKTNYKENQNQPWPHNATECLLAEMFNGSAAQF
LAISETLSGGNQRILQTKPPVPAEQEVFDVTMELFLAGLLLLSGGGGNTQLNSAACTDPV
GGIKLSSSLIELAAAGEDGVTVEAAVRFAKSAFCFEYFDIFDTIITPLRSFLKKQDYIAW
KSFELDLDVLIAMETFVSSRKPKHGLPLGENCAIGSPGGATNLCDDLVMLAETMFAYTCT
LFQVNFPDMDIVVDAVLFLWQKCKAVLHRDIIRSSGLIKYLKKVDGFEKWIHIMSILQEV
AHWCNIGNVDPILMIDIALYTAGVLENLADSSMKSTTKSGMRGSRSETATSTQTPTSIQT
EYCSPTNLLVKHPSEQLAITCKILKKAIDSIATARSLAALPDGHLLIDNNLLKELIQQPT
GELDTDKYDELQREDPYKKGAIQTLIMDLHLEIFQVYYRVAFKLLRINFDLLDSRSSCLG
SSSLGSQCGYAIITEADILKKVKKNKVLKALFLIQKVNYLHSKQEDTALQKTLLEEIVTL
LKKTEAEERKLYLLNTQPDSSDNEKLDVVPPPMLVSRTHNSLTFKPAPFVSSKQVCWYQI
FGRSATGSIFKVRVMDLHLHGTGREVPASQECLLEVKGLKTNEHYIFAVAAYSKDGKIIG
KEIGETTKPILVFHALPLFTTWSYLCQAAYQLGHYPVAKIAFSVLWDHFVSDVSSPRPDP
WYTSNKTEWYIIQKRLDNVAVSLASPILLRGFLCNIFIDSDINCKEDAAFCDSVCDNGPL
YKGQLSRLAKCAKVMVAIDLASWLNDSNQALQAVAQCYGLLAPMIFHRIPSAPVVQILIK
CLCVLQEVAVLKQKKTSAVTESVQHMIGCITYYLAKVLRSWKEYDLALEVAAIGKETLLS
TLRLPNVDPKTLGSGETTQVVEPTQGQESKLEKPTVEDKLTVQNTSEQLKAMDEVLVDLT
KDVTFPVKTEELTQSERSTALYMTILFGPINTAHHKVMSMKGQNRFLEFFVLLMQRLVRE
ENFKPVSRWASEVVAFLKRRNRSLLGLKGTESKSKKSMRNTAVVVEYHNTPMTKKPKDKV
KLKDLLDEFLNNPMLKMDPTAQRKQKEKLEKKAREIFRTQLRPHVHSYFQRKRFHQYCIN
EMPWHSQLHKLVGIRHFTAFMKCYEEEGWTSKTISRYSFLDPDIFILHNSGALIVDTERG
DSETMFEFNLFTDKAKEDSSETSSVDTSENSESDQSPSPTHDQEYHTSPDEPGMPSSSTS
FIISQLSKAFLHFRKAVVLAHRGGHWTILQNTCQLLWNCAHIAMMYITGMDTAIEGVLSS
DNVKLILCTPFNLAALDLLDMILHLQNSNNYVKFIDPDGIFHVPSCVGPIADDEGGFNLK
FEHPFDDVNVVDLHWVCAMVLYALELLCNQKKWESLVHLAIYFNIVTHERYSMQVTPLLV
HAQGQLQARISECQGPAPPQPHFVKASLDSGTVINCRNFIEHQLTVATSTYGEGPVDPEQ
QDDEVTNLEVKRANALISVPVDMKDTLNCFRETLVITNYISCAFRHSRKLHALFLAYTQQ
RRKEIMRATPGRVGFTTTPTLIENSKPADLSNEDFLFFSSVLSKPLSWSQVLLVIISYDN
TIDVLRSNGLNSLCAQALHEQGNLHFYRGKRRNAFKCWSQAIDAIVNVTDFINNWQDMES
SGISFKHSKDFSETLLQRAGIWGCVLAGILSAKIAQFITFSDFKFRTDCCILSSFFFKGL
LRTTLPHPRSDCEYASYEIGLDCDVVELIPGIDLFSNRFRADIRTMVGSMNFLLHELHAA
KQNLLALPLFTLYQYVVTSICRDVQKSVEARILKMRALTELGLFAEAFAEHHIMINGEKI
PCLLLGGFRPSEPMVQMKFNQSIPLLSDNLQVLDEVLKTELPSALHTLYGSRLAKKFELG
RTYLIIKLAETIKHIPQLAGGVCLNAVGQGNAPGNAPGKFTIAVTDMIQRDDWRREVSVR
GGSRGVGLRIDRIDWRREASWWSKDHRAELELARSWGLSSLGAAQNRPRDLPPPHSQIAV
SR
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atggagcccctgcccgccaccttttatggaaagctggaccagaaaaacccagttgtgtcc
gcgctggaccttgagctgaacgacttcaagaaatacatggagaaaacgtcgtccgacgac
tcgtacaccagaggagccaacaatttattttacatctggaacacgtatgaaaaattgttt
ccagttaactattttgaagaaaaattgctgatgattggagattttctagtacggatgaag
ctatataaattggccgtgtggcagtgttatggacgatacctgcagcaattcggttccttc
agaattgaagacatcacagacataaatgagtttaaaaccgtattctttggaaatggaatt
gatgtgaaaaattctagttttacgcttcatgcgttgcaaatgaactgcgtttgccgttac
caaatggtgaagaaagttgacccaaaactgctgaatctggagtcaaagaggaagtgcatg
agtattcttaaatttcttcgattcattatgcaagttgccttgcccaaagaacaccttttc
tggctcattttcaacggtacaacttatatttacaccatctgcagacattttatggtttta
gcactctatgctcagacatttgcacgccgtgctttagggaagatcagtgaattaagccat
ctggaaattattaactcatctcctcaaactcctgagacaagacaagcctttagggaggca
actgtcaaggtatctttaatgatctttaaaagagcagtttttgaaagcagaagaaaacca
aaaggatatttccggcctaaaacaaaaactaactacaaagaaaaccaaaatcaaccctgg
ccccacaatgccactgaatgtctgttggcagaaatgtttaatggcagtgcagcccaattc
cttgctatttcagagactttatccggtggtaatcaacgtattctgcagaccaagccccct
gttccagctgagcaggaagtatttgatgtgacaatggaacttttcctggcaggcttgcta
ctcctttcaggtggtggtggaaatacccaacttaattccgctgcatgcactgatccagtt
ggtggaataaagctatcaagttccctcatagagcttgctgctgctggtgaagatggtgtg
actgtggaggctgctgtgagatttgccaagtctgcattctgctttgagtactttgatata
tttgatactatcattacgccgcttcgctcttttttaaagaaacaggattacattgcttgg
aagagttttgaattggatttggatgtactgatcgcaatggaaacatttgtttcatctcgc
aagcccaagcatggtcttcctttgggagaaaactgtgcaataggatcacctggtggggct
acaaatttgtgtgatgaccttgtgatgctagcagaaacaatgtttgcatacacctgcact
ctgtttcaggttaattttccagatatggacattgttgtggatgcagttcttttcctgtgg
cagaaatgcaaggctgttctgcatagagacatcattaggtcaagtggtttaattaaatat
ctgaaaaaggtggatggctttgagaagtggattcatatcatgtccattcttcaggaagtg
gctcactggtgcaacatagggaacgttgacccaattttgatgatagatattgcactgtac
actgcaggggtgctggaaaatctggcagattcaagtatgaaatccacaacaaagtcaggt
atgcgtggaagcagaagtgaaacagcaacatctacacaaactccaacatcaatccaaacc
gaatattgtagtccaactaatttactagtgaaacatccatctgaacaacttgccattaca
tgcaaaatactcaagaaggcaatagatagcatagctacagctcgctcgctcgctgcttta
ccagatggacatttgttgattgacaataatcttttaaaggaacttattcagcaaccaact
ggtgaattagatacagataaatatgatgaattacaaagagaagatccttacaaaaaagga
gctatccaaactcttatcatggatttacatctggaaatttttcaggtttattacagagtg
gcatttaaacttttgagaatcaattttgatttactggattccagaagcagctgtctagga
agcagcagccttggttcacaatgcggctatgccattataacagaagcagacatcttgaag
aaagtgaagaagaacaaagtgctgaaggcactatttctaattcaaaaagtgaattatttg
catagtaaacaagaggatactgctttacaaaaaaccctcctcgaggaaattgtgactctg
ctaaagaaaacagaagctgaagagaggaagctatatttgttaaacacacaaccggattct
tcagataacgagaagcttgatgttgtaccacctcccatgctggtctccagaacacataat
tcactgacattcaagccagctccttttgtttcatctaaacaggtttgctggtatcagata
tttggtcgaagtgcaacaggatccatttttaaagtcagggtgatggatttacaccttcac
ggtacaggacgagaggtgccagcctctcaagagtgtttactggaggttaaaggcctcaaa
actaatgaacactacatttttgctgtcgctgcttactcaaaagatggaaaaatcattggg
aaagaaatcggagagaccacaaagccaattctagtatttcatgcacttcccctttttacc
acatggtcctacctttgtcaggctgcatatcaattgggacattatccagtggcgaagatt
gctttctcagtgctgtgggatcactttgtctcagacgtatcttcacctagaccagatcca
tggtatacatctaataaaactgaatggtatatcattcagaaaagattagacaatgttgct
gtatctctggcatcccccattcttctccgaggctttctgtgcaatatcttcattgattct
gatattaattgcaaggaagatgcagctttctgtgactcagtctgcgataatggaccactc
tacaaaggacaactcagtagactggctaagtgtgcaaaggtgatggtggctattgatctt
gctagctggctcaatgacagcaatcaagcactgcaagcagttgcccagtgctatggactt
ctggcacccatgatctttcacaggattccttcagctccagttgtgcagattctcatcaaa
tgcctctgtgtcctgcaagaggttgctgttctcaagcagaaaaaaacatctgcagtcact
gaaagtgtgcaacatatgattggttgcatcacgtattacttggcaaaggtattacgatct
tggaaagaatacgatcttgcattagaagtcgcggcaattggaaaggagactctgctctca
acactccgtttgcccaatgtggatccaaagactttgggaagtggagaaactacgcaagtg
gttgaaccaacgcaaggacaagagagcaaattggaaaaacctactgttgaggacaaatta
acagttcagaacacttcagaacagttgaaggcaatggatgaagttttggttgatctgaca
aaagatgttacctttccagtgaaaacagaagaattgacacaaagtgaacgctccactgca
ctttatatgaccattttatttgggccaataaataccgctcatcacaaagtaatgagtatg
aaaggtcaaaatcgattcctggagttctttgttcttctaatgcaaagattggtacgagaa
gagaattttaaaccagtttccagatgggcaagtgaagttgtagcgtttttaaaaaggcgt
aacagatctcttcttggcctcaaaggaacagagagcaaatcaaagaaatccatgaggaac
acagcagttgtggtggagtatcacaatacacctatgaccaaaaaaccaaaagacaaagta
aaattgaaagatcttctggatgaatttctcaacaatccaatgcttaagatggatccaact
gcacaaaggaaacagaaggaaaaattggaaaagaaggccagagaaattttccgaacacag
ctcagaccacatgtgcacagttactttcaacgtaaaagattccatcagtattgtattaat
gaaatgccatggcatagtcagctgcacaagctagtgggaattaggcactttactgcattc
atgaagtgctacgaagaagaaggctggacttcaaagaccattagcagatactcctttctg
gacccagatatctttattctccataattctggggctctaattgttgacacagagcgtggt
gattcagaaactatgttcgaatttaatctgtttacagacaaagccaaagaagattcatca
gaaacatcatcagtggatacttctgaaaactctgaaagtgatcagtcaccatcaccaact
catgaccaggaatatcacacctctccagatgaaccaggcatgccaagcagttctaccagc
tttattataagccaactgagcaaggcgttcttgcacttcagaaaagcagtggtgctcgca
caccgtggaggccattggacaattctgcagaatacttgtcaacttctatggaattgtgca
cacattgcaatgatgtacatcaccggcatggacacggcaatagaaggtgttttaagctca
gacaatgtcaagctgatcctctgtacaccatttaacttagctgcactggatctccttgat
atgatactgcatctacagaactccaataattatgtaaagtttattgatccagatggcata
tttcacgtcccaagctgtgtggggcccatagcagatgatgaaggtggatttaatctgaaa
tttgaacacccgtttgatgatgtgaatgtagttgacttacactgggtgtgtgccatggtg
ttatatgctttagagttgctgtgcaatcaaaagaagtgggaatccttagtccatttggcc
atctacttcaacattgttacacatgaacggtactctatgcaagtcactcccctcttggtt
cacgcccagggccagcttcaggcaaggatcagtgagtgccagggtcctgctcctccacag
cctcattttgtgaaggcctcacttgactcaggaactgttataaattgcaggaactttata
gaacatcagttgacagttgcaacatctacatatggcgaaggccctgttgaccctgagcag
caggatgatgaagtcactaatttagaagtgaagagagcaaatgccttgatctcggtacca
gtggatatgaaggatacactcaactgcttcagggagacattggtcatcacaaactatatc
agttgtgccttccggcacagcagaaagctgcatgcattattcctggcttacacacaacaa
agacggaaggaaataatgagagccacacctggaagagttggcttcactacaacaccaaca
cttattgaaaattccaaaccagcggacctgtcgaacgaagattttcttttttttagtagc
gttttgagtaagccactgtcgtggtcacaagttttgcttgtcatcatatcatatgacaat
accattgacgtacttcgatcaaatggcctgaacagtttgtgtgcacaggccctccatgaa
caaggaaatcttcacttctatagaggaaagaggaggaacgcttttaaatgctggtcgcaa
gcaattgatgcaattgtaaatgtgaccgactttatcaataactggcaagacatggaaagt
agcggcatttcatttaaacattcaaaagatttcagtgaaactctgctacagcgagctggt
atctggggctgtgtgctggctggaatcttatctgcaaaaatagctcaatttattacattc
tcggacttcaaattcagaactgattgctgcatcttatcaagctttttctttaagggcctg
ctcagaactactcttccacacccacgaagtgactgtgaatatgcgtcatatgaaattggg
cttgattgtgacgttgttgagctcattcctgggatcgaccttttctcaaaccgtttcaga
gctgatatacggacaatggtgggaagtatgaacttcctgctccacgaactacatgctgca
aagcaaaacctattggctttaccactgttcacactctaccaatatgttgtcacttcaatc
tgccgtgatgtacagaagagtgttgaagcaagaatattgaagatgagagctttgacggag
ttgggactcttcgcagaagcttttgctgaacaccatatcatgattaatggtgaaaagatt
ccatgtttactgttgggaggtttcagaccttcagagcccatggttcaaatgaagtttaat
caatcaataccacttctcagcgataatttacaggtgcttgatgaggtattgaagacagaa
ctaccttcggcattacacacactttatggctctcgccttgcaaaaaaatttgaacttgga
cgaacgtatcttatcatcaaacttgctgaaactataaagcacatcccacagttggctggc
ggtgtctgtttaaacgcagtgggacaagggaatgctccagggaatgctccaggcaagttt
acgatagcggttacggacatgattcagcgcgatgattggaggagggaggtgtcggtcaga
ggcggaagtaggggggtgggactgcggatagaccgcattgattggaggagggaggcatcc
tggtggagcaaagatcatagagcggagcttgaattggcccgttcatggggcctttcatcg
ctcggcgcggctcaaaatcggccgcgggatcttccaccgccccacagtcaaattgctgtg
tcgaggtga
DBGET
integrated database retrieval system
