Leucoraja erinaceus (little skate): 129707706
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Entry
129707706 CDS
T09122
Name
(RefSeq) non-muscle caldesmon-like isoform X1
KO
K12327
caldesmon
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
129707706
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
leri04812
]
129707706
Cytoskeleton proteins [BR:
leri04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
129707706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
129707706
NCBI-ProteinID:
XP_055508902
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Position
22:complement(9940033..10115572)
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AA seq
598 aa
AA seq
DB search
MDMDEFERRREERRKKREDMRREVERMTNQRTDDDEEELAKERRRKARQERLRDSALNQD
TVEFNSQSSSAMEEESKVSRAPTIMDGDDEMAERLQKREERRQKRLQEAMELQSAFDPTI
RETQDTSGELQGNEREEEEERESNRRNEWRQEPEPEPEPEPEPEPEPEPEPEVEPEPELE
PEPEPEPELEPELEPEPELEPEPEPEPELEPEPEHKPKPEEKKKVIVEEKFEKPKFQIEK
KSQVWKEEFVERSEKNLSKVGSENGEALHEEIAQKYKKTERVSSHSDAKLAQEAEEAAAK
LEAERKLEELRRRQDEKESEEFEKMKQKQQVAVVELEELKKKREGRKKVREEEEQKRQQD
EAERKAREEEEKRKLKEEIERRRAEAAEKRQKPEDTEIGNEKEPFKCVSPRGSALKIGER
ADFLNKSAKKSTTTKVARPVLGVSKIDSKLEQYTNAIEGAKTTKGGKPLASDLPLTAEGV
RNIKSMWETGDVYGSASPTNKGTPNKEVAGLKVGVAGRINQWLTKTPETNKSPAAKPSDV
RPGDVSSKRNLWENKTDTSNGKPTTPSKITTGSKLTAGSTGVHGGYINAGMAPYENGP
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggatatggatgagtttgagcgtcgcagggaggaacgcaggaaaaagcgcgaggacatg
cgacgagaggtggaaagaatgaccaaccagcgcacagatgatgacgaggaagaactggcc
aaagaacgtcgtcgcaaggcacgccaggagcggctgcgggattctgcgctcaatcaggac
accgtggaattcaattcccaaagcagcagtgcaatggaggaagagagcaaggtttccaga
gctccgaccataatggacggtgacgatgagatggcagagaggttgcaaaaacgagaggaa
cggcgtcagaagcgtcttcaagaggccatggagctccaaagcgcgttcgacccgacaata
agagaaactcaagacacttctggagagctgcagggaaacgagagagaggaggaggaagag
agggagagcaaccgaaggaacgagtggcggcaagagcctgaacctgaacccgaacctgaa
cctgaacccgaacccgaacctgagccggaaccagaagtggaaccggagccggaattggaa
ccggaacctgagcctgaaccggaactggagcctgaactggaaccagaacctgaactggaa
ccagagcccgagcctgaaccggaactggagcctgaaccagagcacaagcccaagccggaa
gagaaaaagaaggtgatagtagaagaaaagtttgaaaagccaaagttccaaattgagaag
aagagccaggtttggaaggaagaatttgtcgaacgcagcgagaagaatttgtcaaaggtg
ggctctgagaacggggaggctctccacgaggagatcgcacagaaatataaaaagacggag
agagtgtcgagccactcagatgccaagttggcccaagaggcagaggaagcagcagccaag
ctggaggcggagaggaagctggaggagctgaggcggcgtcaggacgagaaggagagcgag
gagtttgagaagatgaagcagaagcagcaggtggcggtggtggagctggaggagctgaag
aagaagcgggaggggcgcaagaaggtgcgggaggaggaggagcagaagaggcagcaggac
gaagctgagagaaaggcgagggaagaggaggagaagaggaagctgaaggaagagatcgag
agacgaagggcagaggcggcggagaaacgccagaagcctgaagatacggagataggcaat
gagaaggagccattcaaatgtgtcagcccccgcggctccgccctcaagattggcgaaaga
gcagattttttgaataaatcagcgaaaaagagcacaaccaccaaggtagcacgtcctgta
ctgggggtgtccaagattgacagcaaattggagcagtacaccaacgcaattgagggtgcc
aaaaccaccaaggggggcaagcctttggcatcggacctcccgctgacagctgagggggtg
cggaacattaagagcatgtgggaaactggtgatgtctatggttctgcttccccaactaat
aaggggacacccaacaaggaagtagcaggtctgaaagttggcgtggccggtcgcatcaac
cagtggctcaccaaaactcctgaaacaaacaaatcacctgcagctaaaccctcagacgtg
aggccaggagatgtatcaagcaagcgcaacctatgggagaataaaactgacacttccaat
ggaaaaccaaccaccccttctaagattacaactggaagtaagttgacagcaggttcaaca
ggggttcatggcggttacattaatgcagggatggcaccttatgaaaatgggccttaa
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