Leucoraja erinaceus (little skate): 129707722
Help
Entry
129707722 CDS
T09122
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04510
Focal adhesion
leri04512
ECM-receptor interaction
leri04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129707722 (lamb4)
04518 Integrin signaling
129707722 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129707722 (lamb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
LAMB4
CCDC39
Alanine_zipper
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
129707722
NCBI-ProteinID:
XP_055508928
LinkDB
All DBs
Position
22:13905060..13976053
Genome browser
AA seq
1796 aa
AA seq
DB search
MRLEAVALLVLISFAYSQDDCDIGSCYPPLGDLLVGRNSRLSASSTCGQNGPETYCILSH
LQDDKKCFTCDSRLPFNPVSSTFSHRIENVITAFEPDRKKKWWQSKNGVHHVSIQLDLET
LFQFSHLILSFKTFRPAAMLVEKSSDYGHTWKALRYFAYDCVRSFPNINTAPAQKVGDII
CDSKYSDLEPSTDGEIVLKALDPHFEIHNPYSPEIQAQISFTNLRINFTQLHTLGDTRLR
RRQARPDEKYYYALYEMVVRGSCFCFGHASHCIPVDNIRGDVFNQQGMVQGKCVCQHNTE
GINCERCKDLFNDSPWQPARGTEANECKRCNCNGHSERCHFDIAVYLASGSVSGGVCEDC
QHNTMGQNCDQCRPFFHQDHGRTISDPYTCVPCNCDPEGSVNNGMCEGHTDLHLRTVAGH
CICKRNVEGRRCDHCRSGYFGLNAANVDGCEDCGCDPRGSVLTHSACDPVTGECQCQRTA
IGRNCDQCLPNYWGLGNSLYGCSPCDCDIGGAYDNICSQQDGQCRCLPNIISLQCNEPAP
GYFFPPLDYYLYEAEFAQPLGNSASFVVRPTSMPSCDEYLRQQGYNYRVDEGRLILQRIA
KRHLRHRRKRQTVTPGFQVQIIPREATPDRPATWTGLGFARVPHGTGLRFRVDNIPYPVD
FTAAIRYETETSEDWTAHVRVQPINQRESQCRNNVPSAYTLTLPATARMAILQAPICLEP
HVQYMVDIYFNRSPARNNQPINHILIDSLGLIPKIDSLENFCTKTDLDEYSRYQCVEIAS
QIGAEALPEVCEKLITSMSAWIHGGAVACRCNPEGSVSPTCSTFGGQCQCKHGVIGRCCD
SCAPGFYGFGANGCSACDCNRQGSVDSVCDQITGQCGCHRNIVDRTCDRCLPGHHVFPSC
LPCQCNGYSEYCDSWTGVCQNCRAFTSGNNCERCADGFYGNPTLNEPCQPCMCPDIPNSG
LYFAHSCYEDTQNKEQICNCLEGYTGLHCERCSPGFYGSLSGIGDRCLPCRCNDNIDERD
PDACDHRTGECLKCLYNTFGENCQICRPGYYGLAVNKECKECSCNGIGVDARQCLSNGLC
ICDQDTGHCPCLPHMIGRNCEKCAPGFWNLPSRRGCEPCHCDPQNSDSTQCDEFTGQCQC
KDGYGEKTCSECQDNYYGDPKVQCNPCNCNFGGTERPACNKTTGVCNCREGVSGQHCNKC
AWGHCKEFPKCTECHPCFKLLDEEICALIPAMERLSNKTSTVSGKLGPLYDEQFKELEKK
ITEIAKILNGSVASPEAFQETKNYFDKIRNNKMQIDPNVNVSKDPNELNRVIDDLNKELD
QLIEDLNHFKKKPTVKINLNGSFDDIEMFYQISKASQEKANVSELLNISESIREKASALL
DNATFTDKDKLNELKQNTELLDLRVANNLICGAQGNLSCDNDPCGGALCHDDAGNKKCGG
PNCNSTLFMASDAKKRAEETTDQMAQLLNKLHYTISKIDSIRNITLETKEKATKLSDQLA
KTKDELEKEKEETKDIIRMVKEFLTADGVSSEDLEKIANYVLSIKIPITPEELKNKSKQI
QDILSEIKGIDKDVERLNDRSQEAKMLLSRAIKAEKAAREIPSPAELLKELDKIKEVQLK
VVDTVRKITSDLNNSKTKLSQFDGKIKSITDNLMHVMNNIRTFQNEIEELKNKTQSNKIS
TENAMEKANEARIHADEAEQEFKTMNEMYVKLSKLKIQEIPVDGKQKAEQLQQEANNLVK
DLEDKMRRITELEKKIKDGNRKLKEKSDYLFDLEMNVTSIKEFIDDKIYFYNNCLP
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggaggctgtggctctgcttgtgttgataagctttgcttactctcaagacgat
tgcgatattggctcatgctatccacctcttggagacttgcttgtgggtcgcaacagtcgg
ctctctgcctcctcaacctgtggccagaatggacctgaaacatattgcatcctaagtcac
ttacaggatgataaaaagtgttttacatgcgattcaagattacctttcaatcctgtcagc
tccaccttcagccatcgcattgaaaatgtgatcacagcttttgaacctgatcggaaaaag
aaatggtggcagtcaaaaaatggtgtgcaccatgttagtatccagctggacctggagaca
ctttttcaattcagtcatctgattctttccttcaagacttttcgtccggcagcgatgctc
gtggagaaatcatcagattacggtcatacatggaaagccctacgatactttgcatatgac
tgtgtgcgctccttcccaaacatcaatactgcccctgcgcagaaagtgggtgacataata
tgcgattcaaaatactctgaccttgaaccctctacagatggagagattgttctgaaagca
ttggatccacatttcgaaatccataatccatacagtcccgagatacaagctcaaatatca
tttaccaatctgcggataaatttcacccaactgcacactctgggtgatacacgattgcgg
cgaaggcaagctagaccggatgaaaagtattattatgctctgtatgagatggttgttcga
ggaagctgcttctgctttggacatgccagccactgtattccagttgataatataaggggt
gatgttttcaaccaacaaggaatggttcagggaaaatgcgtctgtcagcacaatacagaa
ggtataaactgcgagaggtgtaaggacttgttcaacgattcaccgtggcaaccagctaga
ggaacagaggcaaatgaatgtaaaagatgtaactgcaatggacattcggaaagatgtcat
tttgacatagctgtatacttggccagtggaagtgtaagtggtggggtctgtgaggattgt
caacacaatacaatgggtcaaaactgtgaccagtgcaggcccttcttccatcaggaccat
ggaagaacaatttctgacccatatacgtgtgtcccctgcaactgtgatcctgaaggctcg
gtgaacaatgggatgtgtgaaggtcacacagatctgcatcttcgtacagttgctggccat
tgcatttgtaaaagaaatgtagaaggaagaagatgtgatcattgtcgttctgggtatttt
ggcctgaatgctgccaatgttgatggatgtgaggattgtgggtgtgatcccaggggcagt
gtgttaacacactcggcctgtgacccagtcactggagagtgccagtgtcaacgaactgcc
attggaaggaattgtgatcagtgtctgccaaactactggggacttggcaatagtctctat
ggttgttccccctgtgactgtgacattggaggggcctatgataatatttgttcccagcaa
gatggacaatgtcggtgtctacccaacatcatcagcctccagtgtaatgaaccagcgcct
ggttactttttccctccgctggattactacttgtacgaagctgagtttgcacaaccatta
ggcaacagcgcttccttcgtggtgaggccaacatctatgccgtcatgtgatgagtattta
cggcagcaaggctacaactatcgggtggatgaaggcagactgatacttcaaaggattgct
aaacgtcatttgaggcatcggaggaagaggcaaacagtgactccaggtttccaggtgcag
attattcctagggaagctacacctgatcggcctgctacctggactggcctgggatttgcc
cgtgtaccccatggaacaggactgcggtttagagtggataatattccatacccagtggat
ttcacagctgccattcgctatgagacagagacgtctgaggattggacagctcatgttcgg
gttcagccaatcaaccagcgtgagagccagtgcagaaataacgtgccctcagcttatact
ctcaccttgccagccacagccagaatggcaattcttcaagcccccatctgtctggagcca
catgtacagtatatggtggacatttatttcaaccgttctcctgctcggaacaatcagccc
atcaatcacatcttgatcgattctttgggtttgattccaaagattgactccctggagaat
ttttgcaccaaaacagacttggatgagtacagtcgataccaatgtgttgagattgcttct
caaatcggagccgaggcactgccagaagtgtgtgagaagctgataaccagcatgtctgct
tggatccatggtggagccgttgcctgccgctgtaaccctgaggggtcagtcagtcccacg
tgtagtacatttggtgggcagtgccagtgtaagcacggtgtcatcgggcgatgctgtgac
tcctgcgcaccagggttttatggatttggggccaatggctgttcagcctgtgactgtaac
aggcaaggatctgttgattctgtctgtgatcagataactggacaatgtggttgccacagg
aatattgtagatcgtacttgtgaccgttgcctacctggtcatcatgtgtttcccagttgc
ctgccatgtcagtgcaatggctattccgagtactgtgattcttggacaggcgtctgccag
aactgtagagcatttaccagtggaaacaattgtgaacgatgtgcagatggtttctatgga
aacccaactttaaatgaaccctgtcagccctgtatgtgccccgatattccaaacagtgga
ctctattttgcccattcttgttatgaagacactcaaaataaagaacagatctgtaactgc
ttggagggctacacaggactccattgtgagagatgttcccctggtttctatggctctctt
tctgggattggtgatcgctgtctgccttgtagatgtaatgataacatagatgagagagat
ccagacgcttgtgaccatcggacgggcgagtgcttgaaatgcctgtataatacctttggt
gaaaattgccagatttgcaggccagggtattatggattggcagtgaacaaggaatgcaaa
gagtgttcttgcaatggcattggagttgatgcgaggcagtgtctttccaatggtttatgt
atatgtgatcaggacaccggccactgtccgtgcctgcctcatatgatcgggagaaattgc
gaaaaatgtgctccgggtttctggaatctgcccagcagaagagggtgtgaaccatgtcat
tgtgacccacagaattctgacagcactcagtgtgatgagtttactggacaatgccagtgc
aaagatggctatggggaaaagacatgttctgaatgccaggataattattatggtgatcca
aaggtgcagtgtaacccatgtaactgcaattttggaggaaccgaaaggccagcctgtaac
aagacaacaggggtctgtaactgtcgtgaaggggtgtcgggacaacactgcaacaaatgt
gcctggggtcactgcaaggagtttccaaaatgcacggagtgtcacccttgctttaaattg
ctagatgaagagatttgtgcactaatcccagcaatggaacgactgtccaataagacctcc
acagtcagtggaaagctggggcctctctacgatgaacagtttaaagaactcgaaaaaaaa
attactgagatcgccaaaattctgaatggttctgttgcttcccctgaggcattccaagag
acaaagaattactttgataagatcaggaacaacaaaatgcagattgatccaaatgtgaat
gtctccaaagacccgaatgagctcaacagagtaattgatgatcttaacaaggaacttgac
cagctcatagaggatttgaatcattttaaaaagaagcccacagtaaaaatcaacttgaac
ggaagctttgacgatattgaaatgttctaccagatttcaaaagcctctcaagaaaaagcg
aatgtttcagaattactaaatatttcagaatctataagagaaaaagcatctgccttgtta
gacaatgcaacgtttactgataaagataaacttaatgaactgaagcaaaatactgaacta
ttggatttgagagtggcaaataatctgatttgtggagcacagggaaatctatcctgtgac
aatgatccatgcggaggagctttatgtcatgatgatgctgggaataaaaaatgtggcggc
ccaaactgtaacagcacattgtttatggcaagtgatgcaaaaaaacgtgctgaggaaaca
accgatcagatggcccagctccttaacaaactgcattatacaattagcaagattgattct
atcagaaacatcacactagaaactaaggaaaaggcaaccaagttgtcagatcagttagct
aagaccaaggacgaacttgaaaaggagaaagaagaaactaaagacatcatcagaatggtg
aaagagtttctcacagctgatggtgtatcttctgaggatctggaaaaaattgcgaactat
gttctttctatcaagatacccataactcccgaggagttgaagaacaaaagcaagcaaatt
caggacattctttctgaaattaaaggcattgataaagatgtggaaagactaaatgaccgc
tctcaagaagccaagatgctattgagccgtgcaataaaagccgagaaagcagctcgagag
attccaagccctgcagaactgctgaaagaactggataaaataaaagaagtacaactcaaa
gttgtggacaccgtgagaaagatcaccagtgatctaaacaattccaagacaaaactttca
cagtttgatggcaaaataaaatcaattactgacaacctcatgcatgtcatgaacaatata
agaacgtttcaaaatgaaattgaagaattgaagaacaagacccaaagcaataagatatca
actgaaaatgcaatggaaaaagcaaatgaagccagaattcatgctgatgaagctgaacaa
gaatttaaaacaatgaatgagatgtacgtaaaattaagcaaactgaagatacaagagatt
ccagttgatggaaaacaaaaagcagaacaattacaacaagaggcaaataatctggtaaaa
gacttggaagacaaaatgaggaggattacagaactggaaaagaagataaaagatggaaat
aggaaactaaaggaaaaatctgattatttgtttgatttagaaatgaacgtgacaagcatt
aaagaatttattgacgataaaatctacttttacaataattgtctcccataa
DBGET
integrated database retrieval system