KEGG   Leucoraja erinaceus (little skate): 129707722
Entry
129707722         CDS       T09122                                 
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
  KO
K06245  laminin, beta 4
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri04510  Focal adhesion
leri04512  ECM-receptor interaction
leri04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:leri00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129707722 (lamb4)
   04518 Integrin signaling
    129707722 (lamb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129707722 (lamb4)
SSDB
Motif
Pfam: EGF_laminin Laminin_N LAMININ_IV_B EGF_LMN_ATRN LAMB1 LAMB4 CCDC39 Alanine_zipper F5_F8_type_C
Other DBs
NCBI-GeneID: 129707722
NCBI-ProteinID: XP_055508928
LinkDB
Position
22:13905060..13976053
AA seq 1796 aa
MRLEAVALLVLISFAYSQDDCDIGSCYPPLGDLLVGRNSRLSASSTCGQNGPETYCILSH
LQDDKKCFTCDSRLPFNPVSSTFSHRIENVITAFEPDRKKKWWQSKNGVHHVSIQLDLET
LFQFSHLILSFKTFRPAAMLVEKSSDYGHTWKALRYFAYDCVRSFPNINTAPAQKVGDII
CDSKYSDLEPSTDGEIVLKALDPHFEIHNPYSPEIQAQISFTNLRINFTQLHTLGDTRLR
RRQARPDEKYYYALYEMVVRGSCFCFGHASHCIPVDNIRGDVFNQQGMVQGKCVCQHNTE
GINCERCKDLFNDSPWQPARGTEANECKRCNCNGHSERCHFDIAVYLASGSVSGGVCEDC
QHNTMGQNCDQCRPFFHQDHGRTISDPYTCVPCNCDPEGSVNNGMCEGHTDLHLRTVAGH
CICKRNVEGRRCDHCRSGYFGLNAANVDGCEDCGCDPRGSVLTHSACDPVTGECQCQRTA
IGRNCDQCLPNYWGLGNSLYGCSPCDCDIGGAYDNICSQQDGQCRCLPNIISLQCNEPAP
GYFFPPLDYYLYEAEFAQPLGNSASFVVRPTSMPSCDEYLRQQGYNYRVDEGRLILQRIA
KRHLRHRRKRQTVTPGFQVQIIPREATPDRPATWTGLGFARVPHGTGLRFRVDNIPYPVD
FTAAIRYETETSEDWTAHVRVQPINQRESQCRNNVPSAYTLTLPATARMAILQAPICLEP
HVQYMVDIYFNRSPARNNQPINHILIDSLGLIPKIDSLENFCTKTDLDEYSRYQCVEIAS
QIGAEALPEVCEKLITSMSAWIHGGAVACRCNPEGSVSPTCSTFGGQCQCKHGVIGRCCD
SCAPGFYGFGANGCSACDCNRQGSVDSVCDQITGQCGCHRNIVDRTCDRCLPGHHVFPSC
LPCQCNGYSEYCDSWTGVCQNCRAFTSGNNCERCADGFYGNPTLNEPCQPCMCPDIPNSG
LYFAHSCYEDTQNKEQICNCLEGYTGLHCERCSPGFYGSLSGIGDRCLPCRCNDNIDERD
PDACDHRTGECLKCLYNTFGENCQICRPGYYGLAVNKECKECSCNGIGVDARQCLSNGLC
ICDQDTGHCPCLPHMIGRNCEKCAPGFWNLPSRRGCEPCHCDPQNSDSTQCDEFTGQCQC
KDGYGEKTCSECQDNYYGDPKVQCNPCNCNFGGTERPACNKTTGVCNCREGVSGQHCNKC
AWGHCKEFPKCTECHPCFKLLDEEICALIPAMERLSNKTSTVSGKLGPLYDEQFKELEKK
ITEIAKILNGSVASPEAFQETKNYFDKIRNNKMQIDPNVNVSKDPNELNRVIDDLNKELD
QLIEDLNHFKKKPTVKINLNGSFDDIEMFYQISKASQEKANVSELLNISESIREKASALL
DNATFTDKDKLNELKQNTELLDLRVANNLICGAQGNLSCDNDPCGGALCHDDAGNKKCGG
PNCNSTLFMASDAKKRAEETTDQMAQLLNKLHYTISKIDSIRNITLETKEKATKLSDQLA
KTKDELEKEKEETKDIIRMVKEFLTADGVSSEDLEKIANYVLSIKIPITPEELKNKSKQI
QDILSEIKGIDKDVERLNDRSQEAKMLLSRAIKAEKAAREIPSPAELLKELDKIKEVQLK
VVDTVRKITSDLNNSKTKLSQFDGKIKSITDNLMHVMNNIRTFQNEIEELKNKTQSNKIS
TENAMEKANEARIHADEAEQEFKTMNEMYVKLSKLKIQEIPVDGKQKAEQLQQEANNLVK
DLEDKMRRITELEKKIKDGNRKLKEKSDYLFDLEMNVTSIKEFIDDKIYFYNNCLP
NT seq 5391 nt   +upstreamnt  +downstreamnt
atgaggctggaggctgtggctctgcttgtgttgataagctttgcttactctcaagacgat
tgcgatattggctcatgctatccacctcttggagacttgcttgtgggtcgcaacagtcgg
ctctctgcctcctcaacctgtggccagaatggacctgaaacatattgcatcctaagtcac
ttacaggatgataaaaagtgttttacatgcgattcaagattacctttcaatcctgtcagc
tccaccttcagccatcgcattgaaaatgtgatcacagcttttgaacctgatcggaaaaag
aaatggtggcagtcaaaaaatggtgtgcaccatgttagtatccagctggacctggagaca
ctttttcaattcagtcatctgattctttccttcaagacttttcgtccggcagcgatgctc
gtggagaaatcatcagattacggtcatacatggaaagccctacgatactttgcatatgac
tgtgtgcgctccttcccaaacatcaatactgcccctgcgcagaaagtgggtgacataata
tgcgattcaaaatactctgaccttgaaccctctacagatggagagattgttctgaaagca
ttggatccacatttcgaaatccataatccatacagtcccgagatacaagctcaaatatca
tttaccaatctgcggataaatttcacccaactgcacactctgggtgatacacgattgcgg
cgaaggcaagctagaccggatgaaaagtattattatgctctgtatgagatggttgttcga
ggaagctgcttctgctttggacatgccagccactgtattccagttgataatataaggggt
gatgttttcaaccaacaaggaatggttcagggaaaatgcgtctgtcagcacaatacagaa
ggtataaactgcgagaggtgtaaggacttgttcaacgattcaccgtggcaaccagctaga
ggaacagaggcaaatgaatgtaaaagatgtaactgcaatggacattcggaaagatgtcat
tttgacatagctgtatacttggccagtggaagtgtaagtggtggggtctgtgaggattgt
caacacaatacaatgggtcaaaactgtgaccagtgcaggcccttcttccatcaggaccat
ggaagaacaatttctgacccatatacgtgtgtcccctgcaactgtgatcctgaaggctcg
gtgaacaatgggatgtgtgaaggtcacacagatctgcatcttcgtacagttgctggccat
tgcatttgtaaaagaaatgtagaaggaagaagatgtgatcattgtcgttctgggtatttt
ggcctgaatgctgccaatgttgatggatgtgaggattgtgggtgtgatcccaggggcagt
gtgttaacacactcggcctgtgacccagtcactggagagtgccagtgtcaacgaactgcc
attggaaggaattgtgatcagtgtctgccaaactactggggacttggcaatagtctctat
ggttgttccccctgtgactgtgacattggaggggcctatgataatatttgttcccagcaa
gatggacaatgtcggtgtctacccaacatcatcagcctccagtgtaatgaaccagcgcct
ggttactttttccctccgctggattactacttgtacgaagctgagtttgcacaaccatta
ggcaacagcgcttccttcgtggtgaggccaacatctatgccgtcatgtgatgagtattta
cggcagcaaggctacaactatcgggtggatgaaggcagactgatacttcaaaggattgct
aaacgtcatttgaggcatcggaggaagaggcaaacagtgactccaggtttccaggtgcag
attattcctagggaagctacacctgatcggcctgctacctggactggcctgggatttgcc
cgtgtaccccatggaacaggactgcggtttagagtggataatattccatacccagtggat
ttcacagctgccattcgctatgagacagagacgtctgaggattggacagctcatgttcgg
gttcagccaatcaaccagcgtgagagccagtgcagaaataacgtgccctcagcttatact
ctcaccttgccagccacagccagaatggcaattcttcaagcccccatctgtctggagcca
catgtacagtatatggtggacatttatttcaaccgttctcctgctcggaacaatcagccc
atcaatcacatcttgatcgattctttgggtttgattccaaagattgactccctggagaat
ttttgcaccaaaacagacttggatgagtacagtcgataccaatgtgttgagattgcttct
caaatcggagccgaggcactgccagaagtgtgtgagaagctgataaccagcatgtctgct
tggatccatggtggagccgttgcctgccgctgtaaccctgaggggtcagtcagtcccacg
tgtagtacatttggtgggcagtgccagtgtaagcacggtgtcatcgggcgatgctgtgac
tcctgcgcaccagggttttatggatttggggccaatggctgttcagcctgtgactgtaac
aggcaaggatctgttgattctgtctgtgatcagataactggacaatgtggttgccacagg
aatattgtagatcgtacttgtgaccgttgcctacctggtcatcatgtgtttcccagttgc
ctgccatgtcagtgcaatggctattccgagtactgtgattcttggacaggcgtctgccag
aactgtagagcatttaccagtggaaacaattgtgaacgatgtgcagatggtttctatgga
aacccaactttaaatgaaccctgtcagccctgtatgtgccccgatattccaaacagtgga
ctctattttgcccattcttgttatgaagacactcaaaataaagaacagatctgtaactgc
ttggagggctacacaggactccattgtgagagatgttcccctggtttctatggctctctt
tctgggattggtgatcgctgtctgccttgtagatgtaatgataacatagatgagagagat
ccagacgcttgtgaccatcggacgggcgagtgcttgaaatgcctgtataatacctttggt
gaaaattgccagatttgcaggccagggtattatggattggcagtgaacaaggaatgcaaa
gagtgttcttgcaatggcattggagttgatgcgaggcagtgtctttccaatggtttatgt
atatgtgatcaggacaccggccactgtccgtgcctgcctcatatgatcgggagaaattgc
gaaaaatgtgctccgggtttctggaatctgcccagcagaagagggtgtgaaccatgtcat
tgtgacccacagaattctgacagcactcagtgtgatgagtttactggacaatgccagtgc
aaagatggctatggggaaaagacatgttctgaatgccaggataattattatggtgatcca
aaggtgcagtgtaacccatgtaactgcaattttggaggaaccgaaaggccagcctgtaac
aagacaacaggggtctgtaactgtcgtgaaggggtgtcgggacaacactgcaacaaatgt
gcctggggtcactgcaaggagtttccaaaatgcacggagtgtcacccttgctttaaattg
ctagatgaagagatttgtgcactaatcccagcaatggaacgactgtccaataagacctcc
acagtcagtggaaagctggggcctctctacgatgaacagtttaaagaactcgaaaaaaaa
attactgagatcgccaaaattctgaatggttctgttgcttcccctgaggcattccaagag
acaaagaattactttgataagatcaggaacaacaaaatgcagattgatccaaatgtgaat
gtctccaaagacccgaatgagctcaacagagtaattgatgatcttaacaaggaacttgac
cagctcatagaggatttgaatcattttaaaaagaagcccacagtaaaaatcaacttgaac
ggaagctttgacgatattgaaatgttctaccagatttcaaaagcctctcaagaaaaagcg
aatgtttcagaattactaaatatttcagaatctataagagaaaaagcatctgccttgtta
gacaatgcaacgtttactgataaagataaacttaatgaactgaagcaaaatactgaacta
ttggatttgagagtggcaaataatctgatttgtggagcacagggaaatctatcctgtgac
aatgatccatgcggaggagctttatgtcatgatgatgctgggaataaaaaatgtggcggc
ccaaactgtaacagcacattgtttatggcaagtgatgcaaaaaaacgtgctgaggaaaca
accgatcagatggcccagctccttaacaaactgcattatacaattagcaagattgattct
atcagaaacatcacactagaaactaaggaaaaggcaaccaagttgtcagatcagttagct
aagaccaaggacgaacttgaaaaggagaaagaagaaactaaagacatcatcagaatggtg
aaagagtttctcacagctgatggtgtatcttctgaggatctggaaaaaattgcgaactat
gttctttctatcaagatacccataactcccgaggagttgaagaacaaaagcaagcaaatt
caggacattctttctgaaattaaaggcattgataaagatgtggaaagactaaatgaccgc
tctcaagaagccaagatgctattgagccgtgcaataaaagccgagaaagcagctcgagag
attccaagccctgcagaactgctgaaagaactggataaaataaaagaagtacaactcaaa
gttgtggacaccgtgagaaagatcaccagtgatctaaacaattccaagacaaaactttca
cagtttgatggcaaaataaaatcaattactgacaacctcatgcatgtcatgaacaatata
agaacgtttcaaaatgaaattgaagaattgaagaacaagacccaaagcaataagatatca
actgaaaatgcaatggaaaaagcaaatgaagccagaattcatgctgatgaagctgaacaa
gaatttaaaacaatgaatgagatgtacgtaaaattaagcaaactgaagatacaagagatt
ccagttgatggaaaacaaaaagcagaacaattacaacaagaggcaaataatctggtaaaa
gacttggaagacaaaatgaggaggattacagaactggaaaagaagataaaagatggaaat
aggaaactaaaggaaaaatctgattatttgtttgatttagaaatgaacgtgacaagcatt
aaagaatttattgacgataaaatctacttttacaataattgtctcccataa

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