Leucoraja erinaceus (little skate): 129707723
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Entry
129707723 CDS
T09122
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04510
Focal adhesion
leri04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129707723 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129707723 (lamb1a)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
129707723
NCBI-ProteinID:
XP_055508929
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Position
22:13993834..14072467
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AA seq
1782 aa
AA seq
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MAMLTFGSLSVLVTLWHSALSQEPEFSYGCAEGSCYPATGDLLIGRADKISATSTCGLNK
PEPFCIVSHLQEEKKCFSCESQTPFAENPSSHRIANVVTTFAFNRLNTWWQSENGIENVS
LQLDLEAEFHFTHLIMTFKTFRPAAMMIERSSDSGKTWQVYRYYAYDCESSFPGVSTGSL
KKVDDIICDSRYSDIEPSTEGEVIYRVLDPAFKIEDPYSRRIQNMLKITNLRIRFTKLHT
LGDNLLDSRVEIKEKYYYAIYDMVVRGNCFCYGHASECAPVDESNNQNVEGKVHGRCVCR
HNTKGLNCELCQEFHQDVPWKPAEGRNSNACKRCNCNGHAHKCHFDMAVYLATGNVSGGV
CDGCQNNTMGQHCEQCKPFYYQHPERGIRATDICEPCNCDPAGSLNGGICDSHTDLTANL
IAGQCRCKMNVEGERCDLCKEGFFGLSENDPLGCQPCACNHLGTHPGGSPCDDVTGSCFC
KRLVMGRNCDQCLSQHWGLSNDLDGCRPCDCDLGGAYNNDCSAETGQCQCKGHMVARRCN
EVESGFYFIALDHYTHEAEEADLGPGVMIIQRQYPQDRSPTWTGIGFGRVPQGAYLEFHI
NAIPHSMEYNILIRYEPQLPKNWEVAKITVLRPGEIHTGSRCVNTIPDDDNQVFSLPSGS
RYVVLPRPVCFEKGLNYTIRLELTKYASGDEMETPYILIDSLVLMPHCRSLDIFSTGESG
EIITNSIWDTFQRYRCLESSQSVTKTPMTDVCRGILSSISSIIHEGALPCNCDPQGSLSS
ICNSNGGQCQCRSNVVGRNCDRCAPATYGFGPSGCRPCDCNPEGSVNEFCHHATGQCECK
EGVYGRRCDQCQPGFWGFPICHPCHCNGHADHCDLETGECLNCRDHTSGQNCESCMTGYY
GDPVLGSGDHCRPCPCPDGPDSQRQFATGCYQDPYTLNIVCLCQNGYTGARCDECASGFY
GNPNETRGYCQGCQCNNNIDVTDPQSCDKRTGECLKCLYHTEGEHCNLCKPGYYGNAVQQ
NCIMCVCNYLGTIQCPSADECHCNQTTGQCPCLSNVVGLTCDHCAPNTWKLASGTGCELC
NCNEVHSRAASCNEFTGQCQCLAGFGGRTCSDCQEFFWGDPDVECMKCDCNELGIETQQC
NQTNGRCVCRKGIAGERCDRCARGYFGTFPHCEQCHACFNLWDKIIDELTTQSRQLVEQA
DTVKANGVIGPYQETVNAVQEKINEIQSLLAANPATQPLDNIEDLLEEAKKKVADLAKKV
NSMESGLAATEDQNNVTATELNDLQSDTEGLKAIVTELAERLEYIKNSDIHGALDSVQKY
YKQSVEAEEKVNASTTDPDNTLLESSTIREKVDEIITEREGQFGEQQKEHSQSLEELADK
LESLDLSPLSEKVCGSPAGIPCDEAKCGGPNCRADDKTRKCGGPGCDGLVTLAHNAWQNS
MDFDTDILNALAEVDQLSKMVTDAKVKADEAKLNAQKVLLKTNATKEKVDKSNEDLRNLI
KQIREFLTQDGADLESIEAVANEVLKLEMPTTPEQLQNLTNDIRVRVESLSDVEIILNQS
AADIERAEMLLDEARKSRIHATDLKVTADRVKVALNEAERAQNSATKAIKQANEDIEGTQ
NLLTSIVSETVASEQSLNNATVRLAQIEKDIDELKQKTTDNTNAAENIEETAERVKQAAT
EAKQVLDTVLKEKYNIIEDTIEKKSDMASDAQKKAKMLQSEAESLLLDASRKLELLKKLE
KNYEDNQKALEDKAQQLVKLEEDVRTLLQTISQKVAIYSTCL
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgttgaccttcgggagtttaagtgttctggttaccctttggcacagtgccctc
tctcaagagccagagttcagttatggttgcgctgaggggagctgttatcctgccacagga
gatctattgattgggcgagcagataagatttctgccacttccacttgtggtttgaacaaa
cctgagcccttctgtatcgtcagccacctccaggaagaaaagaaatgcttttcatgcgaa
tcccagactccttttgctgaaaatccaagcagtcaccgaattgcgaatgtggtcacaact
tttgcgttcaaccgactgaatacctggtggcagtctgaaaatggcattgaaaatgtttct
ctccagttggatctggaggctgaattccattttacccacctcatcatgaccttcaagaca
tttcgtccagctgctatgatgattgaacgatcttcagattctggaaagacctggcaggtg
tatcgatattacgcttacgactgtgaatcatcctttcctggcgtttcaacaggatcattg
aaaaaagtggatgacatcatctgcgattctcgatattctgatattgaaccttcgacagaa
ggagaggttatctatcgtgtgttggacccagcgtttaaaattgaagatccatacagccgg
agaatacaaaatatgctgaagatcacaaacctgaggataaggtttactaaactccatact
ctgggtgacaatttactggactcgagagtagaaatcaaagaaaaatattactatgccatc
tacgacatggtggttcggggcaattgtttctgctatggacatgctagtgagtgtgctccc
gttgatgaatctaacaatcagaatgtagaagggaaggtacacggtcgatgtgtgtgccgg
cacaacacaaaaggtctaaactgtgagctgtgtcaagagttccaccaggatgtgccttgg
aaaccagctgaaggacgcaacagcaatgcttgcaaaaggtgtaactgcaatggacatgct
cataaatgtcactttgacatggctgtgtatttagccacgggtaatgtcagtggtggtgtg
tgtgatggctgtcagaataatacaatggggcagcactgtgaacaatgcaaacctttctac
taccagcatccagaacgaggtattcgtgccactgacatctgtgagccttgtaactgtgac
cctgctggatcattgaatggtgggatttgtgatagtcacaccgatttgacagctaatctc
atagcggggcaatgccgttgtaagatgaatgttgagggtgagcgctgcgatctgtgcaaa
gagggtttctttggactaagtgaaaatgatccactaggttgccaaccctgcgcctgtaac
catttgggaactcatccaggaggatctccatgtgatgatgtaacaggaagctgcttctgt
aaacgtctggtgatgggcaggaactgtgatcagtgtctgtctcaacactgggggctaagc
aatgatctagacggatgtcgcccttgtgattgtgatcttgggggtgcctacaataatgac
tgttcggcagagacaggccagtgtcaatgcaaagggcatatggttgcacgtcgctgcaac
gaggttgagtctggattttactttattgcactggaccattacacacacgaagcagaggaa
gctgacctgggtcctggagttatgattatccaacgacaatatccacaggatcgttcccca
acctggacaggaattggatttggacgtgttcctcaaggagcatatctagaattccatata
aatgctattccacattccatggaatacaacatattgattcggtatgaaccacagctgcca
aagaactgggaagtggcaaaaataacggtgttgcgacctggtgaaattcatactggcagt
cgatgtgtgaatactattcctgatgatgataaccaagtgttctctctaccatcaggatca
aggtatgtggttctacctcgacctgtatgctttgaaaaaggactaaactacaccattcgg
ctagaattaacaaaatatgcctctggtgatgaaatggagactccttatattttaattgat
tcgctcgtactcatgccccactgcaggtctttggatatattctctacaggagaatcgggc
gagattatcacaaatagcatatgggataccttccagcggtaccgctgcttggagagcagt
caaagtgttaccaagactccaatgactgatgtctgcagaggcattctttccagcatttct
tctataatccatgaaggagctttgccatgcaattgtgaccctcaaggctctctcagttct
atctgtaattcaaatggtggacagtgccagtgtcgttccaatgtagtcggccgaaactgt
gatcgatgtgctcctgccacttatgggtttggtcctagtggctgcagaccatgtgactgt
aatccagaaggttctgtcaatgaattttgccatcatgccactggccagtgtgagtgtaag
gaaggagtctatggtcgaagatgtgaccagtgtcagcctgggttttggggatttcctatt
tgccacccatgccattgcaatgggcatgcagatcattgtgacttggaaaccggtgaatgt
ctgaactgcagagatcataccagtggacagaactgtgagagctgtatgacgggttattac
ggggaccctgtacttgggtcaggtgaccattgccgcccatgcccctgcccagatggacca
gatagtcaacggcagtttgccactggctgttaccaggatccttataccctcaatattgtt
tgcctttgtcaaaatggatacacaggtgctagatgtgatgaatgtgcatctgggttttat
ggtaaccctaatgagaccagagggtattgtcaggggtgtcaatgcaacaacaacatcgat
gtgactgacccccagtcctgtgacaagcgaactggagagtgtctaaaatgtctgtatcat
accgagggtgaacactgcaacctctgcaagcctggctattatgggaatgcagtgcaacag
aactgcataatgtgtgtctgtaattacttgggcacaatacagtgcccatcagcagatgaa
tgccattgcaatcaaaccactggtcaatgtccttgcctttccaatgtggttggtttaaca
tgtgatcactgcgcacctaatacctggaagctggcaagtggaacaggctgtgaactctgc
aattgcaatgaagtccactcacgtgcagcatcttgcaatgagtttacagggcagtgtcaa
tgcctggctggatttggaggacgaacttgcagtgactgccaagaattcttctggggagat
cccgacgtggaatgtatgaaatgtgactgcaacgaacttggcatcgagacacagcaatgt
aaccagacaaatggacgctgcgtctgtcgaaaaggaattgcaggtgaacggtgtgataga
tgtgcccgaggctactttggaacattccctcattgtgaacaatgccacgcatgcttcaat
ctctgggataaaataattgacgagctgaccactcaaagtagacaacttgtagagcaagcc
gatacagtcaaagccaatggagttattggtccttaccaagaaacagttaatgccgtgcag
gaaaagattaatgagatacaatctctgctcgctgcaaatcctgcaacacaaccacttgac
aatattgaagatcttttggaagaagccaagaagaaagtagctgatcttgcaaaaaaggtg
aattcaatggaatcaggtcttgcagcaacagaagaccaaaacaatgtgactgccacagaa
ctaaatgatcttcagagtgacactgagggtttgaaagctattgtaactgagctagcagag
cgactggaatacattaagaactctgatatccacggcgccttggacagtgtgcagaaatac
tataagcaatctgtagaggctgaggaaaaagttaatgcttccaccaccgatcctgacaat
acactgctggaatcttccaccattcgagaaaaggtggatgaaattattacagagagagag
ggtcagtttggggaacagcaaaaggaacattcacagagcctggaagaattggcggataaa
ttggagagcctggacctttcaccattaagtgaaaaggtttgtgggagtcctgccggtata
ccttgtgatgaggcaaagtgcggaggtccaaattgtcgagctgatgacaaaactaggaag
tgtggaggaccaggctgtgatggactcgtaactttagcacacaacgcatggcagaattct
atggattttgatacagatatcctcaacgctctggcagaagtggatcagctctccaaaatg
gtcactgatgcaaaagtgaaagcagatgaggctaagctaaatgcacaaaaagtactgtta
aaaacaaatgcaacaaaagaaaaagtggataagagcaatgaagatttgagaaatctaatc
aaacaaatcagagaatttcttacacaggatggtgctgacttggagagcattgaagcagtt
gccaatgaagtattgaaactagaaatgccaactactcctgagcagctgcagaatctgacc
aatgacattcgtgtccgggtagagagtctgtcagatgtggagataatcctaaaccagagt
gcagcagacattgaacgagcagaaatgctactggatgaggccaggaaatccagaattcat
gcaacagatcttaaagtcacagctgatcgtgtaaaggtggctttgaatgaagctgaaagg
gcacaaaattcagcaacaaaagccattaaacaagccaatgaagacattgagggaacacag
aacctgctgacttcaattgtatctgaaactgtagcatcagaacaaagtctcaacaatgca
acggtgcgcttagcacagattgaaaaagatattgatgaactaaagcaaaagactacagat
aatacaaatgcggcagaaaacattgaagaaacagcagagagagtgaagcaggctgcaacc
gaggctaaacaggtccttgacactgtccttaaagaaaagtacaatataatagaagacacc
attgagaaaaaatcagatatggcttctgatgctcaaaagaaagcaaagatgttacaaagt
gaagctgaatctttgttattagatgcaagccggaagctggaattattgaagaaactggag
aaaaactatgaagacaaccagaaggccttggaggacaaagcacaacagttagtaaaactg
gaagaagatgtacgcacattgctacagacaatcagccagaaagttgctatctatagtact
tgtttataa
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integrated database retrieval system