KEGG   Leucoraja erinaceus (little skate): 129707723
Entry
129707723         CDS       T09122                                 
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
  KO
K05636  laminin, beta 1
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri04510  Focal adhesion
leri04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:leri00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129707723 (lamb1a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129707723 (lamb1a)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C
Other DBs
NCBI-GeneID: 129707723
NCBI-ProteinID: XP_055508929
LinkDB
Position
22:13993834..14072467
AA seq 1782 aa
MAMLTFGSLSVLVTLWHSALSQEPEFSYGCAEGSCYPATGDLLIGRADKISATSTCGLNK
PEPFCIVSHLQEEKKCFSCESQTPFAENPSSHRIANVVTTFAFNRLNTWWQSENGIENVS
LQLDLEAEFHFTHLIMTFKTFRPAAMMIERSSDSGKTWQVYRYYAYDCESSFPGVSTGSL
KKVDDIICDSRYSDIEPSTEGEVIYRVLDPAFKIEDPYSRRIQNMLKITNLRIRFTKLHT
LGDNLLDSRVEIKEKYYYAIYDMVVRGNCFCYGHASECAPVDESNNQNVEGKVHGRCVCR
HNTKGLNCELCQEFHQDVPWKPAEGRNSNACKRCNCNGHAHKCHFDMAVYLATGNVSGGV
CDGCQNNTMGQHCEQCKPFYYQHPERGIRATDICEPCNCDPAGSLNGGICDSHTDLTANL
IAGQCRCKMNVEGERCDLCKEGFFGLSENDPLGCQPCACNHLGTHPGGSPCDDVTGSCFC
KRLVMGRNCDQCLSQHWGLSNDLDGCRPCDCDLGGAYNNDCSAETGQCQCKGHMVARRCN
EVESGFYFIALDHYTHEAEEADLGPGVMIIQRQYPQDRSPTWTGIGFGRVPQGAYLEFHI
NAIPHSMEYNILIRYEPQLPKNWEVAKITVLRPGEIHTGSRCVNTIPDDDNQVFSLPSGS
RYVVLPRPVCFEKGLNYTIRLELTKYASGDEMETPYILIDSLVLMPHCRSLDIFSTGESG
EIITNSIWDTFQRYRCLESSQSVTKTPMTDVCRGILSSISSIIHEGALPCNCDPQGSLSS
ICNSNGGQCQCRSNVVGRNCDRCAPATYGFGPSGCRPCDCNPEGSVNEFCHHATGQCECK
EGVYGRRCDQCQPGFWGFPICHPCHCNGHADHCDLETGECLNCRDHTSGQNCESCMTGYY
GDPVLGSGDHCRPCPCPDGPDSQRQFATGCYQDPYTLNIVCLCQNGYTGARCDECASGFY
GNPNETRGYCQGCQCNNNIDVTDPQSCDKRTGECLKCLYHTEGEHCNLCKPGYYGNAVQQ
NCIMCVCNYLGTIQCPSADECHCNQTTGQCPCLSNVVGLTCDHCAPNTWKLASGTGCELC
NCNEVHSRAASCNEFTGQCQCLAGFGGRTCSDCQEFFWGDPDVECMKCDCNELGIETQQC
NQTNGRCVCRKGIAGERCDRCARGYFGTFPHCEQCHACFNLWDKIIDELTTQSRQLVEQA
DTVKANGVIGPYQETVNAVQEKINEIQSLLAANPATQPLDNIEDLLEEAKKKVADLAKKV
NSMESGLAATEDQNNVTATELNDLQSDTEGLKAIVTELAERLEYIKNSDIHGALDSVQKY
YKQSVEAEEKVNASTTDPDNTLLESSTIREKVDEIITEREGQFGEQQKEHSQSLEELADK
LESLDLSPLSEKVCGSPAGIPCDEAKCGGPNCRADDKTRKCGGPGCDGLVTLAHNAWQNS
MDFDTDILNALAEVDQLSKMVTDAKVKADEAKLNAQKVLLKTNATKEKVDKSNEDLRNLI
KQIREFLTQDGADLESIEAVANEVLKLEMPTTPEQLQNLTNDIRVRVESLSDVEIILNQS
AADIERAEMLLDEARKSRIHATDLKVTADRVKVALNEAERAQNSATKAIKQANEDIEGTQ
NLLTSIVSETVASEQSLNNATVRLAQIEKDIDELKQKTTDNTNAAENIEETAERVKQAAT
EAKQVLDTVLKEKYNIIEDTIEKKSDMASDAQKKAKMLQSEAESLLLDASRKLELLKKLE
KNYEDNQKALEDKAQQLVKLEEDVRTLLQTISQKVAIYSTCL
NT seq 5349 nt   +upstreamnt  +downstreamnt
atggcaatgttgaccttcgggagtttaagtgttctggttaccctttggcacagtgccctc
tctcaagagccagagttcagttatggttgcgctgaggggagctgttatcctgccacagga
gatctattgattgggcgagcagataagatttctgccacttccacttgtggtttgaacaaa
cctgagcccttctgtatcgtcagccacctccaggaagaaaagaaatgcttttcatgcgaa
tcccagactccttttgctgaaaatccaagcagtcaccgaattgcgaatgtggtcacaact
tttgcgttcaaccgactgaatacctggtggcagtctgaaaatggcattgaaaatgtttct
ctccagttggatctggaggctgaattccattttacccacctcatcatgaccttcaagaca
tttcgtccagctgctatgatgattgaacgatcttcagattctggaaagacctggcaggtg
tatcgatattacgcttacgactgtgaatcatcctttcctggcgtttcaacaggatcattg
aaaaaagtggatgacatcatctgcgattctcgatattctgatattgaaccttcgacagaa
ggagaggttatctatcgtgtgttggacccagcgtttaaaattgaagatccatacagccgg
agaatacaaaatatgctgaagatcacaaacctgaggataaggtttactaaactccatact
ctgggtgacaatttactggactcgagagtagaaatcaaagaaaaatattactatgccatc
tacgacatggtggttcggggcaattgtttctgctatggacatgctagtgagtgtgctccc
gttgatgaatctaacaatcagaatgtagaagggaaggtacacggtcgatgtgtgtgccgg
cacaacacaaaaggtctaaactgtgagctgtgtcaagagttccaccaggatgtgccttgg
aaaccagctgaaggacgcaacagcaatgcttgcaaaaggtgtaactgcaatggacatgct
cataaatgtcactttgacatggctgtgtatttagccacgggtaatgtcagtggtggtgtg
tgtgatggctgtcagaataatacaatggggcagcactgtgaacaatgcaaacctttctac
taccagcatccagaacgaggtattcgtgccactgacatctgtgagccttgtaactgtgac
cctgctggatcattgaatggtgggatttgtgatagtcacaccgatttgacagctaatctc
atagcggggcaatgccgttgtaagatgaatgttgagggtgagcgctgcgatctgtgcaaa
gagggtttctttggactaagtgaaaatgatccactaggttgccaaccctgcgcctgtaac
catttgggaactcatccaggaggatctccatgtgatgatgtaacaggaagctgcttctgt
aaacgtctggtgatgggcaggaactgtgatcagtgtctgtctcaacactgggggctaagc
aatgatctagacggatgtcgcccttgtgattgtgatcttgggggtgcctacaataatgac
tgttcggcagagacaggccagtgtcaatgcaaagggcatatggttgcacgtcgctgcaac
gaggttgagtctggattttactttattgcactggaccattacacacacgaagcagaggaa
gctgacctgggtcctggagttatgattatccaacgacaatatccacaggatcgttcccca
acctggacaggaattggatttggacgtgttcctcaaggagcatatctagaattccatata
aatgctattccacattccatggaatacaacatattgattcggtatgaaccacagctgcca
aagaactgggaagtggcaaaaataacggtgttgcgacctggtgaaattcatactggcagt
cgatgtgtgaatactattcctgatgatgataaccaagtgttctctctaccatcaggatca
aggtatgtggttctacctcgacctgtatgctttgaaaaaggactaaactacaccattcgg
ctagaattaacaaaatatgcctctggtgatgaaatggagactccttatattttaattgat
tcgctcgtactcatgccccactgcaggtctttggatatattctctacaggagaatcgggc
gagattatcacaaatagcatatgggataccttccagcggtaccgctgcttggagagcagt
caaagtgttaccaagactccaatgactgatgtctgcagaggcattctttccagcatttct
tctataatccatgaaggagctttgccatgcaattgtgaccctcaaggctctctcagttct
atctgtaattcaaatggtggacagtgccagtgtcgttccaatgtagtcggccgaaactgt
gatcgatgtgctcctgccacttatgggtttggtcctagtggctgcagaccatgtgactgt
aatccagaaggttctgtcaatgaattttgccatcatgccactggccagtgtgagtgtaag
gaaggagtctatggtcgaagatgtgaccagtgtcagcctgggttttggggatttcctatt
tgccacccatgccattgcaatgggcatgcagatcattgtgacttggaaaccggtgaatgt
ctgaactgcagagatcataccagtggacagaactgtgagagctgtatgacgggttattac
ggggaccctgtacttgggtcaggtgaccattgccgcccatgcccctgcccagatggacca
gatagtcaacggcagtttgccactggctgttaccaggatccttataccctcaatattgtt
tgcctttgtcaaaatggatacacaggtgctagatgtgatgaatgtgcatctgggttttat
ggtaaccctaatgagaccagagggtattgtcaggggtgtcaatgcaacaacaacatcgat
gtgactgacccccagtcctgtgacaagcgaactggagagtgtctaaaatgtctgtatcat
accgagggtgaacactgcaacctctgcaagcctggctattatgggaatgcagtgcaacag
aactgcataatgtgtgtctgtaattacttgggcacaatacagtgcccatcagcagatgaa
tgccattgcaatcaaaccactggtcaatgtccttgcctttccaatgtggttggtttaaca
tgtgatcactgcgcacctaatacctggaagctggcaagtggaacaggctgtgaactctgc
aattgcaatgaagtccactcacgtgcagcatcttgcaatgagtttacagggcagtgtcaa
tgcctggctggatttggaggacgaacttgcagtgactgccaagaattcttctggggagat
cccgacgtggaatgtatgaaatgtgactgcaacgaacttggcatcgagacacagcaatgt
aaccagacaaatggacgctgcgtctgtcgaaaaggaattgcaggtgaacggtgtgataga
tgtgcccgaggctactttggaacattccctcattgtgaacaatgccacgcatgcttcaat
ctctgggataaaataattgacgagctgaccactcaaagtagacaacttgtagagcaagcc
gatacagtcaaagccaatggagttattggtccttaccaagaaacagttaatgccgtgcag
gaaaagattaatgagatacaatctctgctcgctgcaaatcctgcaacacaaccacttgac
aatattgaagatcttttggaagaagccaagaagaaagtagctgatcttgcaaaaaaggtg
aattcaatggaatcaggtcttgcagcaacagaagaccaaaacaatgtgactgccacagaa
ctaaatgatcttcagagtgacactgagggtttgaaagctattgtaactgagctagcagag
cgactggaatacattaagaactctgatatccacggcgccttggacagtgtgcagaaatac
tataagcaatctgtagaggctgaggaaaaagttaatgcttccaccaccgatcctgacaat
acactgctggaatcttccaccattcgagaaaaggtggatgaaattattacagagagagag
ggtcagtttggggaacagcaaaaggaacattcacagagcctggaagaattggcggataaa
ttggagagcctggacctttcaccattaagtgaaaaggtttgtgggagtcctgccggtata
ccttgtgatgaggcaaagtgcggaggtccaaattgtcgagctgatgacaaaactaggaag
tgtggaggaccaggctgtgatggactcgtaactttagcacacaacgcatggcagaattct
atggattttgatacagatatcctcaacgctctggcagaagtggatcagctctccaaaatg
gtcactgatgcaaaagtgaaagcagatgaggctaagctaaatgcacaaaaagtactgtta
aaaacaaatgcaacaaaagaaaaagtggataagagcaatgaagatttgagaaatctaatc
aaacaaatcagagaatttcttacacaggatggtgctgacttggagagcattgaagcagtt
gccaatgaagtattgaaactagaaatgccaactactcctgagcagctgcagaatctgacc
aatgacattcgtgtccgggtagagagtctgtcagatgtggagataatcctaaaccagagt
gcagcagacattgaacgagcagaaatgctactggatgaggccaggaaatccagaattcat
gcaacagatcttaaagtcacagctgatcgtgtaaaggtggctttgaatgaagctgaaagg
gcacaaaattcagcaacaaaagccattaaacaagccaatgaagacattgagggaacacag
aacctgctgacttcaattgtatctgaaactgtagcatcagaacaaagtctcaacaatgca
acggtgcgcttagcacagattgaaaaagatattgatgaactaaagcaaaagactacagat
aatacaaatgcggcagaaaacattgaagaaacagcagagagagtgaagcaggctgcaacc
gaggctaaacaggtccttgacactgtccttaaagaaaagtacaatataatagaagacacc
attgagaaaaaatcagatatggcttctgatgctcaaaagaaagcaaagatgttacaaagt
gaagctgaatctttgttattagatgcaagccggaagctggaattattgaagaaactggag
aaaaactatgaagacaaccagaaggccttggaggacaaagcacaacagttagtaaaactg
gaagaagatgtacgcacattgctacagacaatcagccagaaagttgctatctatagtact
tgtttataa

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