Leucoraja erinaceus (little skate): 129707862
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Entry
129707862 CDS
T09122
Symbol
shank3a
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
leri
Leucoraja erinaceus (little skate)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
Ank_3
Ank_5
SAM_2
SH3_2
PDZ_6
SH3_9
PDZ
SH3_1
FERM_f0
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
129707862
NCBI-ProteinID:
XP_055509245
LinkDB
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Position
22:26152235..26682491
Genome browser
AA seq
1817 aa
AA seq
DB search
MSMVSARSMPLSPTSRKHEEEQQQNPCNCSEGEEEESFSREDTIYHTIRPSTAAKTGHQM
DNPAPSTIIIRIGVPDLEQTKCMRFNLDAPVWVSKQRILCTLNQTLKDVLNYGLFQPANN
GRVGKFLDEERQLREYPTLPDTPIPYLEFRYKKRVYTQSHIEEKQLAKLHTKANLKKFME
YIQYHHVEKVGKLLEKGLDPNFHDPDSGECPLTLAAQLESTSEIIKLLKSGGAHLDFRTR
DGLTALHKAVRCQNHAALITLLDLGASPDYKDSRGLTPLYHSSMVGGDPYCCELILHDRA
NVGCMDENGWQEIHQACRYGHVQHLEHLLFYGADMSTQNASGNTALHICALYNQESCARV
LLFRGANKEVKNYNSQSAFQVAIIAGNFELAEIIKNHKEADVVPFRETPSYTNRRRGGGS
ALSSPRTLLRSTSDNNINNFAGRSTHSPVPSVRSLPPQLLAQMQEGTEGGQQSTASSRSS
HSRSPSLQCVQEESEANTPIFRRQTKARLSPSTEPNPTPSAAPAHRGPKRKLYSAVPGRT
FIVVKPYQPQGEGEIQLHRGERVKVLSIGEGGFWEGTVKGRTGWFAAECVEEVQMRQYNT
RQETREDRTKRLFRHYTVGSYDNFSSHSDYVIEEKTALLQKKENEGYGFVLRGAKAETPI
EEFTPTPAFPALQYLESVDVEGVAWKAGLRTGDFLIEVNNINVVKVGHKQVVSMIRQGGN
NLLMKVVTVSRKPELEDGMRKKGQALVNAPPPPKRAPSTTLTLRSKSMTAELEELEKLDE
ILAAADRSVRPENVAADSRAATVKQRPTSRRITSAEISSLFERQGMPSKSTPPSVPEKPH
LPMPRRMSRTKSIGASEDDKLSVTAMEGRFLRSTSMQDTLREGLGIPPPPQIAPPPPPSP
YLLDTGPPPPFSPPPPPGRSYDNVRSSFKPNTEAKVHGGQQVTTTAEVYEPNRSPVPPVE
RQKRARSMIILQDSSYYPVEATDISWPSPSPTPQDKSKRKAKVVDNPYANVGQFNVGLFA
PTKPLRKKSPLVKQFQVEDAIERASAVGSSGAGKELLARRIAQQSGKEYEQLQREGISKA
QDDGQDLASPFAVAIAGAVRDREKRLEEKRKSTVFLSVGAIESETAPNIPALQQSRSVDE
RLLSSSDRSLRSPIPSPIPSSRPPANTPVTFIHPLTGKPLDPNSPLALALAARQRALVAE
TQHQRATGSNETVKAQERKTPVYMESHIKEAKKTEVETLISPPFSPEDKASYSPTSGVTA
KHQWGTSATLRKEAESRQGQMEKAEREEKKVEEKKSMLINIVDTSQQKTAGLLMVHATSN
GQESELQDTSTTALKPLSPQPQPFLSEPQASQPLCAVSEPPATEAPGKPQTQGSSDEDME
SFAVSLPPILSSSDEETREELAKIGLVPPPDEFANGIFIQAKAEKTAIHPSGPPTTAPSA
PGVSPSGKPTDAPPSEASVDSGVEEIDTRSSSDHHLETTSTISTVSSMSTLSSESGEPLD
TYTSFADGQTFILEKPPVPPKPKLKSQLNKGPVTFRDPLLKQTSDSELVAQHQPSALPPG
VGRSRYLIQRKSKLWGDPIEPRPIQMVEGSKPTVISELSSRLQQLSKDTHSLGDEPTAAS
LEVGKRSPVVTARLFSSLGELNTISQRSFGATFTIRPGSRHPVTRRAPSPGKPGIDSRTE
AGISSPRPSPLSTPTQTPPTILKSSSLNIPHEPKEVRFVVRSSSARSRSPSPSGIPMHSL
LPPKPFCQKPMVMWNKYDVADWLDSLNLSEHRESFLHNEIEGSHLPALTKEDYVELGVTR
VGHRMNIERALKHFIDS
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggttagtgcacggagcatgcctctcagtccgacatccaggaaacatgaggag
gagcagcagcagaacccttgcaactgcagcgagggtgaagaggaggagagtttcagcaga
gaggacacgatctaccataccattagaccaagtacagcagctaaaaccggccaccaaatg
gacaatcctgcgccgagcactataatcattcgcattggggtaccggacttggagcaaacg
aaatgtatgcggttcaatcttgacgcccccgtatgggtgtctaagcaacggattctgtgc
actctcaaccagactctaaaggatgtgctaaattatgggctctttcaacccgcaaacaac
gggagggtggggaagtttctggatgaggaacgtcaactccgagaatacccaacgttgcct
gacaccccgataccatatctggagttccgatataagaagcgagtgtacacgcagagtcac
atagaagagaagcaactggccaaactccacacaaaggcgaatcttaagaagtttatggag
tacatccagtatcatcacgtagagaaagttggtaaactgttagagaaaggattggatccg
aatttccatgatcctgacagtggagaatgtccattaacgttggctgcacaattggagagc
acatctgaaatcatcaagttgctgaaaagtgggggagctcatttggattttaggacccgg
gatggattaacagctttacacaaggctgtacgatgtcagaatcatgcagcactaataacc
ctattagatctgggtgcttctccagattacaaggacagccgggggttaacacctttgtac
catagttcaatggtgggaggagacccttattgttgtgaactgattctgcatgaccgtgcc
aatgtgggttgtatggatgaaaatggctggcaggaaatccatcaggcttgccggtatggg
catgtgcaacatctagaacacctactgttttatggagcggacatgagcacacagaatgcc
tcggggaacactgctctgcatatttgtgcactctacaatcaggaaagttgtgcaagggtc
cttttatttagaggagcaaacaaagaagttaagaattacaacagccaatcagcattccag
gttgccattatagctgggaactttgaattggccgagattattaagaaccacaaggaagca
gatgttgtgcctttcagagaaaccccaagctacactaataggcgacgaggtggaggaagt
gccctctcatccccacgtacgctgctacgatccaccagtgacaacaacatcaacaatttt
gcaggccgttccacccattcacctgtgccatctgtcagaagcctgccacctcagttactg
gcacagatgcaggagggtaccgagggaggccagcagagtacagcaagctcacgaagttca
cacagccgatcgccctcgttgcagtgtgtccaggaggaaagtgaggccaacacccccatt
ttcaggaggcagactaaagccaggctcagtccaagcaccgaacccaacccaactccatcg
gccgcccccgctcacagaggacccaagcgcaaactgtacagtgcggtcccgggacggacc
ttcatcgtggtgaagccttaccagccccagggggagggcgagatccaactgcaccgaggg
gaacgcgtcaaagtactgagcattggtgaaggaggtttctgggaagggacagtaaaaggt
cgtactgggtggtttgcagcagaatgcgtggaagaggtacaaatgagacagtacaacaca
cggcaagaaactcgtgaagaccggacaaagcgactcttcaggcattacacagttggatcc
tatgataacttttcatctcacagtgattatgtcatcgaagagaagacagcactgcttcag
aaaaaagagaacgagggatatggctttgtcctccgaggagctaaagctgagactccaatt
gaagagttcacacccacgccagcattcccagctttgcaatacctggaatcagtggacgtg
gagggagtggcatggaaagctgggctcaggacaggagacttcctgattgaggtcaacaac
atcaatgtggtgaaggttggacacaagcaagtggtctccatgatccgacagggaggaaat
aacctgctgatgaaggtggtgacagtcagtcgaaagccagaactcgaagatgggatgagg
aaaaaaggtcaggcgctagttaatgccccaccacccccgaagagggcaccaagtactacg
ttgactctccgctccaaatccatgactgctgaactcgaggagctagaaaaattggacgag
atcctcgcagcagctgatcgttcagttaggccagagaacgtggcggcagactctcgagct
gcaacagtcaagcaacgacccacaagcaggcgcatcacatcagcagaaatcagttcatta
tttgagcgtcaaggaatgccctcaaagtcaaccccaccatctgttccagaaaagccacac
ctcccaatgcctagaagaatgtcacggacaaagtctataggagcctctgaggatgataaa
ctttcagttacagcaatggaaggaaggtttttacgcagcacatcgatgcaagatactctc
cgggaaggactaggcatacccccacctccgcagattgccccaccacccccaccctctcct
taccttttagacacaggtcctccacctcctttctcaccacccccaccccctggaagaagt
tacgataatgtgcgttccagctttaaacccaacacagaagcgaaagttcatggaggccag
caggtaacaacaacagcagaggtctatgaaccaaatcggtctcctgtgcctccggtagag
aggcagaaaagggccaggtcaatgataatcctgcaggattcttcctactatcctgtggag
gcaactgacatctcatggccaagcccctcaccaactcctcaagataaaagcaaacgaaag
gcaaaggtagttgataacccatatgcaaatgtgggccagttcaacgtgggactttttgca
ccaacaaaaccgcttcgtaaaaaaagccctctggtcaagcaattccaggttgaagatgct
atagagagagcatcagcagttggctcgtctggggctggtaaagagttattagccagaagg
atagcccagcagtctggcaaagaatatgagcagctgcagagagaaggaatcagtaaagca
caggacgatggacaagatctggccagtccctttgctgttgctattgcaggagcagtacgg
gaccgagaaaaaaggttggaagaaaagaggaaatcaacagtcttcctttctgtgggtgcc
attgaaagcgaaacagcacccaacatcccagccctgcaacagtccaggtcagtcgatgag
agactgctgagtagcagcgataggtctctccgatcaccaatcccttcccctattccttcc
tcaaggccaccagcaaacacgcctgtgacttttatacatcctctcacagggaaaccgctg
gatcctaactcaccactggcacttgcgctggccgcaaggcagcgggcactagtcgctgaa
acacagcatcagcgagcaactggaagcaatgaaactgtaaaagcccaagaaagaaaaact
ccagtctacatggagagtcacatcaaggaggcaaagaaaacagaagttgaaacactcata
tcaccacctttctcaccagaggacaaagcgagctatagtcccacatccggagtgactgca
aagcaccagtggggaacctctgctacactgaggaaagaagcagaatcaaggcagggacaa
atggagaaagctgagagagaagaaaagaaagtggaagagaagaaaagtatgctaatcaac
attgtagatacatcacaacagaaaacggcaggcctactgatggtccatgcaacaagtaat
ggccaagagtcagaacttcaagatacttcaacaactgccttgaagccattgtcaccacag
cctcaaccattcctttcagagccacaagcttcccagccactttgtgctgtttctgagcct
ccagctactgaagcacctgggaaaccacaaactcaaggaagctctgatgaagatatggaa
tcatttgctgtttccctccctccaattctctcctcaagtgatgaggaaacgagagaggaa
cttgcaaagattggacttgtaccacctcctgatgaatttgcaaatggcatcttcatccaa
gccaaggctgagaaaactgccatccatcccagtggacccccaactacagcaccttcagct
cctggcgtttcaccctcagggaagccaacagatgccccaccttcagaagcaagtgtggat
tcgggtgtagaagaaatagatacaagaagcagtagtgaccatcacctggaaaccacaagc
acgatttcaactgtctccagtatgtcaacattgtcatctgagagcggggagcccttggat
acctacacatcatttgctgatggacagaccttcatactcgagaagcctccagtgcctcca
aagccaaagctaaagtcccaactcaacaaagggccagttacattcagggaccctctcttg
aagcagacctcagacagtgagcttgttgcccaacaccagccgtctgcgttaccccccggc
gtcggacggtctcgctacctcatacagagaaaatccaagttgtggggggatccaattgag
cccaggcctattcagatggtggagggcagcaaacccactgtaataagtgagctgagctcc
aggctgcaacaattgtctaaggatactcattcactcggggatgagcctacagcggcctct
ctagaagtaggaaagagatctcctgttgtcactgcaagactattcagtagtttaggagag
ctgaacacgatatcccagcggagcttcggggcgacattcaccatccgtcctggctccagg
cacccagttacccgaagggctcctagtcctgggaaacctggcatcgattcaaggacagaa
gccggcatcagctcaccaaggccctcacctctctccaccccgacacagacccctcccacc
atcctgaaatcttctagcctcaacattcctcatgagccaaaggaggtgcggtttgtggtg
cggagttccagtgctcgtagccgctccccatctccatctggtatccccatgcattcttta
ctcccccccaaacccttctgccaaaagcctatggtgatgtggaacaagtatgacgtagca
gactggctcgacagtcttaacctatcagaacacagagagagcttcttacataatgagatt
gaaggctctcatctacctgccttgacaaaagaagactatgtagaacttggagttacaaga
gtgggacatcgaatgaacatagaacgtgctttaaaacattttattgatagctag
DBGET
integrated database retrieval system
